BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,211,779	T→C	R364R (CGT→CGC)	rpoD →	RNA polymerase sigma(70)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,211,779	0	T	C	100.0%	1100.1 / NA	344	R364R (CGT→CGC)	rpoD	RNA polymerase sigma(70)
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (159/185); total (159/185)

Only 100 of 375 total aligned reads displayed.

TGAAGAAGTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGTATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATA  >  NC_000913/3211689‑3211868

tGAAGAAGTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCAt                                                                                         <  1:4840498/93‑1 (MQ=255)

 gaagaaGTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATg                                                                                        >  1:4595639/1‑93 (MQ=255)

 gaagaaGTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATg                                                                                        >  2:6948606/1‑93 (MQ=255)

  aagaagTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGt                                                                                       >  2:3551266/1‑93 (MQ=255)

   agaagTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTc                                                                                      >  1:1080784/1‑93 (MQ=255)

   agaagTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTc                                                                                      <  2:1204900/93‑1 (MQ=255)

    gaagTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTcc                                                                                     >  1:71493/1‑93 (MQ=255)

     aagTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCa                                                                                    <  1:6257415/93‑1 (MQ=255)

      agTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCAt                                                                                   <  2:74664/93‑1 (MQ=255)

      agTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCAt                                                                                   <  1:5244990/93‑1 (MQ=255)

       gTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATc                                                                                  >  1:2277994/1‑93 (MQ=255)

        tGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCg                                                                                 >  2:688005/1‑93 (MQ=255)

        tGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCg                                                                                 <  1:1000000/93‑1 (MQ=255)

         gCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCgg                                                                                >  2:367530/1‑93 (MQ=255)

          cATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGt                                                                               <  2:5045081/93‑1 (MQ=255)

            ccgcgCTCTGCAAATACTGCAGAAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGa                                                                             <  2:1551153/92‑1 (MQ=255)

             cgcgCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGaa                                                                            >  1:2487164/1‑93 (MQ=255)

                 cccTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGa                                                                        <  1:2998897/93‑1 (MQ=255)

                 cccTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGa                                                                        <  2:302610/93‑1 (MQ=255)

                  ccTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGaa                                                                       >  2:21315/1‑93 (MQ=255)

                   cTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGaaa                                                                      >  1:6334469/1‑93 (MQ=255)

                   cTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGaaa                                                                      <  1:5971426/93‑1 (MQ=255)

                   cTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGaaa                                                                      <  2:6981630/93‑1 (MQ=255)

                   cTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGaaa                                                                      <  1:4346911/93‑1 (MQ=255)

                    tGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAg                                                                     >  2:3975277/1‑93 (MQ=255)

                    tGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAg                                                                     >  1:2656556/1‑93 (MQ=255)

                    tGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAg                                                                     >  2:4982927/1‑93 (MQ=255)

                      cAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGcc                                                                   <  2:174520/93‑1 (MQ=255)

                       aaaaaCTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGccc                                                                  >  2:1703943/1‑93 (MQ=255)

                          aaCTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCccgcc                                                               <  2:5447648/93‑1 (MQ=255)

                            cTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGt                                                             <  2:6012096/93‑1 (MQ=255)

                             tGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGtc                                                            >  2:5782921/1‑92 (MQ=255)

                              gcagcaGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGc                                                           >  1:793584/1‑93 (MQ=255)

                                 gcagATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGCAGCGAAAGCCCGCCGTGCgaa                                                        >  2:7834748/1‑93 (MQ=255)

                                 gcagATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGCCCATCGGTGAAGCGAAAGCCCGCCGTGCgaa                                                        <  1:1827956/93‑1 (MQ=255)

                                  cagATTGAGGAATAAGCCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCgaag                                                       <  1:7874017/93‑1 (MQ=255)

                                   agATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCgaaga                                                      >  2:2039283/1‑93 (MQ=255)

                                   agATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCgaaga                                                      <  1:7718999/93‑1 (MQ=255)

                                   agATTGAAGAAGAAACCGCCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCgaaga                                                      <  2:3087522/93‑1 (MQ=255)

                                    gATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCgaagaa                                                     >  2:5151873/1‑93 (MQ=255)

                                     aTTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaa                                                    <  1:4672879/93‑1 (MQ=255)

                                     aTTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaa                                                    <  1:1471612/93‑1 (MQ=255)

                                     aTTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaa                                                    <  1:6948607/93‑1 (MQ=255)

                                       tGAAGAAGAAGCCGGCGTTGCCGTTGAACAGTTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaaga                                                  <  1:7097080/93‑1 (MQ=255)

                                       tGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaaga                                                  >  1:671117/1‑93 (MQ=255)

                                       tGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaaga                                                  <  1:3261894/93‑1 (MQ=255)

                                       tGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaaga                                                  <  1:2774077/93‑1 (MQ=255)

                                       tGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGaagaaaga                                                  <  1:3584447/93‑1 (MQ=255)

                                         aagaagaaACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAgaga                                                <  2:4267862/93‑1 (MQ=255)

                                         aagaagaaACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAgaga                                                <  2:7897489/93‑1 (MQ=255)

                                          agaagaaACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAgagag                                               >  2:2329529/1‑92 (MQ=255)

                                              gaaACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGtt                                           >  1:615222/1‑93 (MQ=255)

                                                aaCCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGa                                         <  2:1391460/93‑1 (MQ=255)

                                                 aCCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGaa                                        <  2:2850984/93‑1 (MQ=255)

                                                 aCCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGaa                                        >  1:3064427/1‑93 (MQ=255)

                                                 aCCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGaa                                        >  2:6100328/1‑93 (MQ=255)

                                                   cGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGc                                      <  1:733777/93‑1 (MQ=255)

                                                   cGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGc                                      <  1:6461170/93‑1 (MQ=255)

                                                   cGGCCTGACCAGCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGc                                      <  1:4172258/93‑1 (MQ=255)

                                                    ggCCTGACCATCGAGCAGGTTAAAGATATCACCCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCg                                     <  2:4384885/93‑1 (MQ=255)

                                                     gCCTGACCATCGAGCAGGTTAAAGATATCAACGGTCGCAGGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGa                                    >  2:2667398/1‑93 (MQ=255)

                                                        tGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACt                                 >  2:6625499/1‑93 (MQ=255)

                                                        tGACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACt                                 >  2:2891453/1‑93 (MQ=255)

                                                        cgACCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACt                                 <  1:2689941/92‑1 (MQ=255)

                                                         aaCCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACtt                                <  1:7473133/92‑1 (MQ=255)

                                                          aCCATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATAGTTGAAGCGAACTTa                               <  2:3214439/93‑1 (MQ=255)

                                                           ctaacGAGCAGGTTAAAGATATCACCCGTCGAATGCCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTAc                              <  2:5611262/89‑1 (MQ=255)

                                                            cATCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACg                             <  2:7705783/93‑1 (MQ=255)

                                                              tCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTc                           >  1:1631812/1‑93 (MQ=255)

                                                              tCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTc                           >  2:7291220/1‑93 (MQ=255)

                                                              tCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTc                           <  1:5759017/93‑1 (MQ=255)

                                                              tCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTc                           <  2:6223854/93‑1 (MQ=255)

                                                              tCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTc                           <  2:1335349/93‑1 (MQ=255)

                                                              tCGAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTc                           >  1:318704/1‑93 (MQ=255)

                                                               cGAGCAGGTTAAAGATATGCGCGGTCGCATGTCCAAAGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCt                          <  1:1271961/93‑1 (MQ=255)

                                                                gAGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTg                         >  1:5681379/1‑93 (MQ=255)

                                                                 aGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTgg                        >  2:3850368/1‑93 (MQ=255)

                                                                 aGCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTgg                        <  1:1549844/93‑1 (MQ=255)

                                                                  gCAGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGt                       >  2:1857054/1‑93 (MQ=255)

                                                                    aGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTa                     <  2:115019/93‑1 (MQ=255)

                                                                    aGGTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTa                     >  2:3417041/1‑93 (MQ=255)

                                                                      gTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTAtt                   >  2:4470985/1‑93 (MQ=255)

                                                                      gTTAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTAtt                   >  1:4863024/1‑93 (MQ=255)

                                                                       ttAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTAttt                  <  1:6100330/93‑1 (MQ=255)

                                                                        tAAAGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTc                 <  1:3953667/93‑1 (MQ=255)

                                                                          aaGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTa               >  1:2025164/1‑93 (MQ=255)

                                                                           aGATATCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTAt              >  2:4116365/1‑93 (MQ=255)

                                                                           aGATAGCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTAt              <  2:624641/93‑1 (MQ=255)

                                                                              tatCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGc           >  2:4750452/1‑93 (MQ=255)

                                                                              tatCAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGc           >  2:4187074/1‑93 (MQ=255)

                                                                                 cAACCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTaa        <  1:5622895/93‑1 (MQ=255)

                                                                                   aCCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGa      <  1:899777/93‑1 (MQ=255)

                                                                                   aCCGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGa      >  1:3404028/1‑93 (MQ=255)

                                                                                    ccGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGaa     <  1:4965658/93‑1 (MQ=255)

                                                                                    ccGTCGCATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGaa     >  2:1289592/1‑93 (MQ=255)

                                                                                      gtcgcATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAAt   >  1:3862806/1‑93 (MQ=255)

                                                                                       tcggATGCCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATa  <  1:4526222/93‑1 (MQ=255)

                                                                                       tcgcATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATa  <  1:2399515/93‑1 (MQ=255)

                                                                                       tcgcATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATa  <  2:7096682/93‑1 (MQ=255)

                                                                                       tcgcATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATa  <  1:372014/93‑1 (MQ=255)

TGAAGAAGTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGTATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATA  >  NC_000913/3211689‑3211868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`