| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,548 | 1 bp→GG | intergenic (‑117/‑744) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,547 | 1 | . | G | 94.7% | 854.4 / 38.8 | 285 | intergenic (‑116/‑745) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (9/6); new base G (132/138); total (141/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.36e-02 | |||||||||||
| * | NC_000913 | 3,957,548 | 0 | T | G | 100.0% | 902.8 / NA | 285 | intergenic (‑117/‑744) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (141/144); total (141/144) | |||||||||||
Only 100 of 299 total aligned reads displayed.
AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑T‑CGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957471‑3957627 ||| aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGT‑ccc < 2:3198887/93‑2 (MQ=255) cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGATAAT‑CCGG‑GCTT‑CGCAGGT‑ccctc > 2:5644126/1‑90 (MQ=255) gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAg < 2:3852705/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAgg < 1:3947108/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAgg > 2:3378234/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAggg < 1:3178266/93‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAggg > 2:5975651/1‑93 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGga > 1:6675462/1‑93 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGgag > 2:364921/1‑93 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGgaga < 2:1012947/93‑1 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGaa < 2:7488492/93‑1 (MQ=255) aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGaaaa < 2:4461026/93‑1 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAAc > 2:2373865/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAAc > 1:7340250/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACt > 1:4931482/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACt > 1:4734322/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATTGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACtt > 2:5280072/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACtt > 1:1016958/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACtt < 2:6397098/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTa > 2:6885328/1‑93 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTa < 2:1915729/93‑1 (MQ=255) caaCGTAATTGTCAGACAAGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GC‑TCCGCAGGTCCCTCAAGGGGAGAAAACTTa < 1:6379891/92‑1 (MQ=255) agcGTAATTGTCAGTCAGGGAGTGGCTGTTACATATATGGCAAAAGCCCGGAAAAA‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg < 2:4695108/91‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg < 2:6156502/93‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg < 1:7862306/93‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGCGGCTGGGGCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAg > 2:331943/1‑93 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAgg < 2:2526323/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAgg > 1:2266842/1‑93 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAgg > 2:414246/1‑93 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAAATTAggg > 2:3024452/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGc > 2:6954633/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGc < 1:2834348/93‑1 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGcc < 1:823182/93‑1 (MQ=255) aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct > 1:4623059/1‑93 (MQ=255) aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct > 1:5152088/1‑93 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctc < 1:1187606/93‑1 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCC‑G‑GCTT‑CGCAGGTCCCTCCAGGGGTGAAAACTTAGGGCctct > 2:904281/1‑93 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctct > 1:1395017/1‑93 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 1:2973049/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:6884597/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 2:1025249/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCCAGGGGAGAAAACTTAGGGCCTCTTTg > 1:6958774/1‑93 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:4414582/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:705691/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:3865050/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:6714198/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 2:5383523/93‑1 (MQ=255) agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATggg > 2:2477588/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 1:5519262/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:1697314/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt < 2:6523225/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:598675/1‑93 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa < 2:7535113/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:63430/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:7179247/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa < 2:226591/93‑1 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:2224101/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:32648/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 1:2042940/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa < 1:7429987/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:1215628/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:2873017/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:5772427/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 2:1539195/93‑1 (MQ=255) gCTGGTACATATATGGTAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 2:5179412/93‑1 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 2:5701422/93‑1 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt > 1:5268562/1‑93 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt < 1:1307521/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt < 1:448682/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGGAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:5135937/93‑1 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 1:2390388/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:7142401/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:6165937/93‑1 (MQ=255) tACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg < 2:6243400/93‑1 (MQ=255) tACATATACGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg < 1:5086729/93‑1 (MQ=255) aCATATATGGAAAAAGCCGGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 2:2836171/93‑1 (MQ=255) cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 1:7687587/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 2:2760747/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:1704657/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 1:3093287/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 1:1103232/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 1:3033570/1‑93 (MQ=255) tGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 2:5548878/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 2:7609268/1‑93 (MQ=255) gCAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta > 2:4933352/1‑93 (MQ=255) cAAAAGCCGGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 1:5569400/93‑1 (MQ=255) cAAAAGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat < 1:4368706/93‑1 (MQ=255) aaaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt < 2:2131257/93‑1 (MQ=255) aaaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:7402266/1‑93 (MQ=255) aaaaGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:1146561/1‑93 (MQ=255) aaaaGCCCGGAAAAT‑CC‑GGGCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCACTATCGGGGATGGttatt > 2:7013300/1‑93 (MQ=255) aaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 1:4037987/1‑93 (MQ=255) aaaGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 2:3104555/1‑93 (MQ=255) aGCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 2:4901037/93‑1 (MQ=255) gCCCGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 2:6476595/1‑93 (MQ=255) cccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 2:1144544/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 2:4046988/1‑93 (MQ=255) ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:2567450/1‑93 (MQ=255) ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:1568677/1‑93 (MQ=255) ccGGAAAAT‑CCGG‑GCTT‑CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 2:7837778/93‑1 (MQ=255) ||| AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑GC‑T‑CGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957471‑3957627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |