BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,255,885	(A)_8→7	intergenic (‑288/+43)	yhaO ← / ← yhaP	putative transport system permease protein/putative L‑serine dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,255,878	0	A	.	100.0%	734.5 / NA	160	intergenic (‑281/+50)	yhaO/yhaP	putative transport system permease protein/putative L‑serine dehydratase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (96/64); total (96/64)

Only 100 of 187 total aligned reads displayed.

ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA  >  NC_000913/3255786‑3255966

acaATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATcaca                                                                                          <  2:575727/93‑1 (MQ=255)

 caATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaa                                                                                         >  2:3062151/1‑93 (MQ=255)

  aaTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaa                                                                                        >  2:3630470/1‑93 (MQ=255)

   aTCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaa                                                                                       >  2:2420819/1‑93 (MQ=255)

      aaGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaa                                                                                    <  2:1281374/93‑1 (MQ=255)

      aaGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaa                                                                                    >  1:3591753/1‑93 (MQ=255)

       aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag                                                                                   <  2:847964/93‑2 (MQ=255)

       aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag                                                                                   >  2:1719137/1‑92 (MQ=255)

       aGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaag                                                                                   >  2:3964867/1‑92 (MQ=255)

        gACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaagg                                                                                  <  2:593956/93‑3 (MQ=255)

         aCTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggt                                                                                 <  1:4148281/93‑4 (MQ=255)

         aCTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggt                                                                                 <  2:387712/93‑4 (MQ=255)

          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                <  1:2145900/93‑5 (MQ=255)

          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                <  1:2145901/93‑5 (MQ=255)

          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                <  1:1314783/93‑5 (MQ=255)

          cTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACaaaaaaaggtg                                                                                >  2:1181996/1‑89 (MQ=255)

            ttGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGca                                                                             >  1:1233957/1‑93 (MQ=255)

              gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGcaca                                                                           <  1:1655077/93‑1 (MQ=255)

              gAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGcaca                                                                           >  1:690390/1‑93 (MQ=255)

                aaTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAtt                                                                         >  2:1717156/1‑93 (MQ=255)

                 aTAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACAttt                                                                        >  2:4354969/1‑93 (MQ=255)

                  tAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtg                                                                       <  2:4075596/93‑1 (MQ=255)

                   aaCGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTtgt                                                                      <  1:289081/93‑1 (MQ=255)

                     cGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGc                                                                    >  2:2247781/1‑93 (MQ=255)

                     cGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGc                                                                    >  2:159184/1‑93 (MQ=255)

                       gagaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAc                                                                  >  1:4353536/1‑93 (MQ=255)

                        agaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAcc                                                                 >  2:910646/1‑93 (MQ=255)

                         gaTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCAccc                                                                >  1:2753356/1‑93 (MQ=255)

                          aTGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCa                                                               >  2:1110407/1‑93 (MQ=255)

                           tGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCaa                                                              >  1:4578151/1‑93 (MQ=255)

                            ggATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAg                                                             <  2:2787885/93‑1 (MQ=255)

                            ggATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAg                                                             <  1:3449136/93‑1 (MQ=255)

                            ggATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAg                                                             <  2:4326065/93‑1 (MQ=255)

                              aTAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGa                                                           <  1:2771571/93‑1 (MQ=255)

                              aTAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGa                                                           <  2:3660644/93‑1 (MQ=255)

                               tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAt                                                          >  2:2320348/1‑93 (MQ=255)

                               tAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGAt                                                          <  1:742261/93‑1 (MQ=255)

                                   aaTTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGaaa                                                      <  2:2493969/93‑1 (MQ=255)

                                     ttttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGc                                                    <  1:3990998/93‑1 (MQ=255)

                                     ttttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGc                                                    <  1:2254764/93‑1 (MQ=255)

                                      tttCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCt                                                   >  2:3396462/1‑93 (MQ=255)

                                        tCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGa                                                 <  1:1015137/93‑1 (MQ=255)

                                        tCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGa                                                 <  1:2612383/93‑1 (MQ=255)

                                         ctactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGAc                                                <  2:2192918/93‑1 (MQ=255)

                                         ctactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAACGTGCACATTTGTGCACCCAAGGATGAAAGCTGAc                                                >  1:4616480/1‑93 (MQ=255)

                                          tactaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACa                                               <  1:3877959/93‑1 (MQ=255)

                                           actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg                                              <  1:4397712/93‑1 (MQ=255)

                                           actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg                                              >  1:4480866/1‑93 (MQ=255)

                                           actaAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAg                                              >  2:1961671/1‑93 (MQ=255)

                                             taAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCa                                            >  1:1467557/1‑93 (MQ=255)

                                              aaaTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCaa                                           >  1:1050102/1‑93 (MQ=255)

                                              aaaTTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCaa                                           <  1:2030834/93‑1 (MQ=255)

                                                 ttAATCGCAGGAGAATATTCATTCTCTATTTGCGGCCGATC‑CCAACAAAAGGTGCACATTTGTGCACCCAGGGATGAAAGCTGGCAGCAACGt                                        >  1:2175149/1‑93 (MQ=255)

                                                 ttAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGt                                        >  1:2287937/1‑93 (MQ=255)

                                                  tAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGTTGACAGCAATGTc                                       <  1:2384882/93‑1 (MQ=255)

                                                   aaTCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCa                                      <  2:340473/93‑1 (MQ=255)

                                                      cGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGcc                                   >  2:682772/1‑93 (MQ=255)

                                                       gCAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCg                                  >  1:1140812/1‑93 (MQ=255)

                                                        cAGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGc                                 <  1:2437272/93‑1 (MQ=255)

                                                         aGGAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCa                                >  1:2672903/1‑93 (MQ=255)

                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCAGATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               >  1:1493573/1‑93 (MQ=255)

                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               >  2:71157/1‑93 (MQ=255)

                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               <  2:1813233/93‑1 (MQ=255)

                                                          ggAGAATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAg                               >  1:4666869/1‑93 (MQ=255)

                                                            agaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAc                             <  2:3455615/93‑1 (MQ=255)

                                                             gaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAcc                            <  2:2720127/93‑1 (MQ=255)

                                                             gaATATTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGAcc                            >  1:3271216/1‑93 (MQ=255)

                                                               atatTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc                          >  1:4234350/1‑93 (MQ=255)

                                                               atatTCATTCTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCAc                          <  2:3005327/93‑1 (MQ=255)

                                                                  ttcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACttt                       >  1:3078693/1‑93 (MQ=255)

                                                                   tcattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTa                      >  2:2946857/1‑93 (MQ=255)

                                                                    cattcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTaa                     <  2:3591454/93‑1 (MQ=255)

                                                                     attcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt                    <  2:2625463/93‑1 (MQ=255)

                                                                     attcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt                    <  1:1593856/93‑1 (MQ=255)

                                                                     attcTCTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAAt                    <  2:1518162/93‑1 (MQ=255)

                                                                       tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg                  >  1:1883068/1‑93 (MQ=255)

                                                                       tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg                  >  1:3753018/1‑93 (MQ=255)

                                                                       tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg                  <  2:1005927/93‑1 (MQ=255)

                                                                       tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg                  >  1:3278045/1‑93 (MQ=255)

                                                                       tctcTATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg                  >  1:2430942/1‑93 (MQ=255)

                                                                       tctcTATTTGCGGCAGATCAC‑AAAAAAAGGGGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATgg                  >  2:1999598/1‑93 (MQ=255)

                                                                        ctctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGc                 <  1:3531978/93‑1 (MQ=255)

                                                                          ctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCa               >  2:2827148/1‑93 (MQ=255)

                                                                          ctATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCa               <  1:1501821/93‑1 (MQ=255)

                                                                           tATTTGCGGCAGATCAC‑AATAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAg              >  2:4559122/1‑93 (MQ=255)

                                                                           tATTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAg              <  2:1105081/93‑1 (MQ=255)

                                                                            aTTTGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGt             >  1:2171616/1‑93 (MQ=255)

                                                                             tttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtc            >  1:3673553/1‑93 (MQ=255)

                                                                             tttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtc            >  1:1438468/1‑93 (MQ=255)

                                                                              ttGCGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcc           <  1:371315/93‑1 (MQ=255)

                                                                               tGCGCCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcct          <  1:3978777/93‑1 (MQ=255)

                                                                                 cGGCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGtcctcc        <  2:4595041/93‑1 (MQ=255)

                                                                                  ggCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcg       >  2:1054007/1‑93 (MQ=255)

                                                                                  ggCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcg       >  1:2079413/1‑93 (MQ=255)

                                                                                   gCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgc      >  2:4255059/1‑93 (MQ=255)

                                                                                   gCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgc      >  1:1966753/1‑93 (MQ=255)

                                                                                   gCAGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCcgc      <  2:3515902/93‑1 (MQ=255)

                                                                                     aGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGt    <  2:1674702/93‑1 (MQ=255)

                                                                                     aGATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGt    >  2:3116925/1‑93 (MQ=255)

                                                                                      gATCAC‑AAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTACTCCGCGTg   >  2:1319920/1‑93 (MQ=255)

ACAATCAAGACTTTGAAATAACGGAGATGGATAAGAATTTTCTACTAAATTAATCGCAGGAGAATATTCATTCTCTATTTGCGGCAGATCACAAAAAAAAGGTGCACATTTGTGCACCCAAGGATGAAAGCTGACAGCAATGTCAGCCGCAGACCACTTTAATGGCCAGTCCTCCGCGTGA  >  NC_000913/3255786‑3255966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`