Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,572,523 (T)7→6 intergenic (‑12/‑181) asd ← / → yhgN aspartate‑semialdehyde dehydrogenase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,572,5170T.99.6% 1051.0 / ‑3.0 232intergenic (‑6/‑187)asd/yhgNaspartate‑semialdehyde dehydrogenase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base . (109/122);  total (109/123)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 268 total aligned reads displayed.

GGCGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAA  >  NC_000913/3572425‑3572605
                                                                                            |                                                                                        
gtggTCAAAGTCGCGCTCTCCAACCATGTGTCGCATGAGAAGGGAGCCTCCCATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGt                                                                                          <  2:14948/90‑1 (MQ=255)
ggCGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGt                                                                                          <  2:1630270/93‑1 (MQ=255)
  ggTCGAAGTCGCGCTCTTCAACCATGCGTGGCAGGAGAGCGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttt                                                                                        <  1:1257893/92‑1 (MQ=255)
   gTCGAGGTCTCGCTCTCCAACTGTGCGTTGCATGAGACCGGACCCGTCCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGtttt                                                                                       <  2:3031546/93‑1 (MQ=255)
   gTCGAGGTCGCGCTCTTCACCCATGCGTTGCATGAGAAGGGAGCCGATCATCCCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGtttt                                                                                       <  2:3741543/93‑1 (MQ=255)
   gTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGtttt                                                                                       >  1:2754683/1‑93 (MQ=255)
      gAAGTCGCGCTCTTCAACCCTGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttttc                                                                                    >  2:4576060/1‑92 (MQ=255)
      gAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttttc                                                                                    >  2:2689154/1‑92 (MQ=255)
      gAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttttc                                                                                    >  2:3104450/1‑92 (MQ=255)
       aggTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGACCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttttcc                                                                                   <  1:1109587/91‑3 (MQ=255)
       aaGTCGCGCTCTACAACCATGGTTTGCATGAGAACGGACCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGttttttcc                                                                                   <  2:4130936/93‑3 (MQ=255)
             ccccctTCAACCATGCTTTGCATGAGAACGGAGCCAACCATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCaaa                                                                            <  1:3686495/89‑1 (MQ=255)
              gcTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAg                                                                           >  2:2556235/1‑93 (MQ=255)
               cttttCAACCATGCGTTGCAGGAGAACGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGa                                                                          <  1:2149543/90‑1 (MQ=255)
               ctctTCACCCATGCTTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGa                                                                          <  1:1507576/93‑1 (MQ=255)
               ctctTCACCCATGCGTTGCATGAGAACGGACCCGACCATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGa                                                                          <  1:536490/93‑1 (MQ=255)
               ctctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGa                                                                          >  2:3208502/1‑93 (MQ=255)
                tctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAt                                                                         >  1:2343929/1‑93 (MQ=255)
                tctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAt                                                                         >  1:2498293/1‑93 (MQ=255)
                tctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAt                                                                         >  2:2212657/1‑93 (MQ=255)
                tctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAt                                                                         >  2:1942683/1‑93 (MQ=255)
                tctTCAACCATGCGTTGCATGAGAACGGAACCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAt                                                                         <  1:3396147/93‑1 (MQ=255)
                 ctTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtg                                                                        >  2:239941/1‑93 (MQ=255)
                  ttCAACCAAGCGTTTCAGGAAAACGGACCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtgt                                                                       <  1:1489596/93‑1 (MQ=255)
                   taaaCCATGCATTGCATGAGAACGGAGCAGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtgtg                                                                      <  1:4679293/91‑1 (MQ=255)
                    cAACCATGCGTTGCATGAGAACGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtgtgt                                                                     <  2:1303320/93‑1 (MQ=255)
                    cAACCATGCGTTGCATGAGAACGGAGCCGACAATACCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtgtgt                                                                     <  2:1342167/93‑1 (MQ=255)
                     aaCCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtgtgtg                                                                    >  1:2389653/1‑93 (MQ=255)
                     aaCCATGCGTTGCATGAGAACGGAGCCGACAATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtgtgtg                                                                    >  2:3464213/1‑93 (MQ=255)
                     aaCCATGCGTTGCATGAGAACGGACCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGAtgtgtg                                                                    <  1:2842444/93‑1 (MQ=255)
                       ccATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCt                                                                  >  1:1533968/1‑93 (MQ=255)
                          tGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGta                                                               >  2:3081627/1‑93 (MQ=255)
                           gCGTTGCATGAGACCGGAGCCGCCCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGtat                                                              <  1:1577254/93‑1 (MQ=255)
                           gCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGtat                                                              >  2:382383/1‑93 (MQ=255)
                             gTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATaa                                                            >  1:3479394/1‑93 (MQ=255)
                             gTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGCGTGCTGTATaa                                                            >  2:4290528/1‑93 (MQ=255)
                              ttGCATGAGAACGGCTGCGACCATAGCGCGCCCGCCGATCAATCCAACATTTTTCATACACGATTTTTCCTCCAGAGATGTGTTCTTtatata                                                           >  2:3132402/1‑91 (MQ=255)
                              tggCATGAGAACGGACCCGCCCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATaaa                                                           <  2:1123885/91‑1 (MQ=255)
                               tGCATGAGAACGGAGCCGCCCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAAt                                                          <  2:176925/93‑1 (MQ=255)
                                 cATGAAACCGGAGCCGACCATCCCCCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAAtgt                                                        <  2:770870/93‑1 (MQ=255)
                                    gagaACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGcc                                                     >  1:2939755/1‑93 (MQ=255)
                                     agaAGGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCg                                                    <  1:3895561/93‑1 (MQ=255)
                                      gaACGCAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCgg                                                   <  2:3665041/93‑1 (MQ=255)
                                       aaCGAACCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGt                                                  <  1:2603085/93‑1 (MQ=255)
                                         cGGAGCCGACCATCCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGtct                                                <  1:961131/93‑1 (MQ=255)
                                           gAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTctcc                                              >  2:1146850/1‑93 (MQ=255)
                                             gCCGACCATCCCGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTctcctc                                            <  1:926496/93‑1 (MQ=255)
                                             gCCAACAATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTctcctc                                            <  1:1185739/93‑1 (MQ=255)
                                                 aCCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTgg                                        >  2:3417598/1‑93 (MQ=255)
                                                  ccATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGc                                       >  1:2315788/1‑93 (MQ=255)
                                                   cATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGca                                      >  1:3640843/1‑93 (MQ=255)
                                                   cATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGca                                      >  1:3339175/1‑93 (MQ=255)
                                                   cATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGca                                      >  1:1816070/1‑93 (MQ=255)
                                                    aTACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGcac                                     >  2:3260556/1‑93 (MQ=255)
                                                     tACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGcaca                                    >  2:316106/1‑93 (MQ=255)
                                                     acccGCCCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGcaca                                    <  1:3734314/91‑1 (MQ=255)
                                                      aCCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACAt                                   >  2:2082099/1‑93 (MQ=255)
                                                           gcCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTc                              >  1:1260496/1‑93 (MQ=255)
                                                           gcCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTc                              >  2:4109712/1‑93 (MQ=255)
                                                           cccAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTc                              <  2:3612706/92‑1 (MQ=255)
                                                              aGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCAcc                           >  2:4001212/1‑93 (MQ=255)
                                                                ccGATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCAt                         <  1:605228/93‑1 (MQ=255)
                                                                 cGATAAAACCAACATTTTTCATAGGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATa                        <  1:866264/93‑1 (MQ=255)
                                                                 cGATAAAACCAACATTTTTCATAAGCGGTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATa                        >  2:848586/1‑93 (MQ=255)
                                                                  gATAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATAc                       >  2:4650640/1‑93 (MQ=255)
                                                                   aTAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACa                      <  1:3155661/93‑1 (MQ=255)
                                                                   aTAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACa                      <  2:2930384/93‑1 (MQ=255)
                                                                    tAAAACCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaa                     >  2:533351/1‑93 (MQ=255)
                                                                     aaaaCCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaa                    >  1:2067424/1‑93 (MQ=255)
                                                                      aaaCCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaaa                   >  1:2808641/1‑93 (MQ=255)
                                                                      aaaCCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaaa                   <  1:1733918/93‑1 (MQ=255)
                                                                      aaaCCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaaa                   <  1:1069371/93‑1 (MQ=255)
                                                                      aaaCCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaaa                   >  2:605874/1‑93 (MQ=255)
                                                                       aaCCAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACaaaaa                  >  2:2779961/1‑93 (MQ=255)
                                                                         ccAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagc                <  2:2969568/93‑1 (MQ=255)
                                                                         ccAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagc                >  2:38798/1‑93 (MQ=255)
                                                                         ccAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagc                >  1:266876/1‑93 (MQ=255)
                                                                          cAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               >  1:1420720/1‑93 (MQ=255)
                                                                          cAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               <  2:3370846/93‑1 (MQ=255)
                                                                          cAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               >  2:1668659/1‑93 (MQ=255)
                                                                          cAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               >  1:4224925/1‑93 (MQ=255)
                                                                          cAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               <  1:2044398/93‑1 (MQ=255)
                                                                          cAACATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagca               >  1:4433000/1‑93 (MQ=255)
                                                                           aaCATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagcag              >  1:1877262/1‑93 (MQ=255)
                                                                            aCATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAagcagc             <  1:4553833/93‑1 (MQ=255)
                                                                             cATTTTTCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGcc            <  1:728489/93‑1 (MQ=255)
                                                                                ttttCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCaaa         <  2:1906085/93‑1 (MQ=255)
                                                                                ttttCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCaaa         <  2:2634375/93‑1 (MQ=255)
                                                                                  ttCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGt       <  1:4375028/93‑1 (MQ=255)
                                                                                  ttCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGt       <  1:1631241/93‑1 (MQ=255)
                                                                                  ttCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGt       <  1:2265402/93‑1 (MQ=255)
                                                                                  ttCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGt       <  2:4271488/93‑1 (MQ=255)
                                                                                  ttCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGt       <  1:873629/93‑1 (MQ=255)
                                                                                   tCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTc      >  2:2935106/1‑93 (MQ=255)
                                                                                   tCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTc      <  2:4395669/93‑1 (MQ=255)
                                                                                   tCATAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTc      <  1:4275250/93‑1 (MQ=255)
                                                                                      tAAGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCa   >  1:4072054/1‑93 (MQ=255)
                                                                                       aaGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCaa  >  2:4543635/1‑93 (MQ=255)
                                                                                       aaGCGTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCaa  <  2:2431921/93‑1 (MQ=255)
                                                                                       aaGCGTTTTTTCCTGCAAAGATGGGTGCTGTAGAAATGTGCCGGTCTCCTCTTGACACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCaa  <  2:900431/93‑1 (MQ=255)
                                                                                            |                                                                                        
GGCGTCGAAGTCGCGCTCTTCAACCATGCGTTGCATGAGAACGGAGCCGACCATACCGCGCCAGCCGATAAAACCAACATTTTTCATAAGCGTTTTTTTCCTGCAAAGATGTGTGCTGTATAAATGTGCCGGTCTCCTCTTGGCACATCTTTCACCATACAAAAAGCAGCCAAAGTCGCAA  >  NC_000913/3572425‑3572605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: