| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 379,246 | (G)10→9 | intergenic (‑120/+47) | yaiN ← / ← yaiO | putative alpha helix chain/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 379,237 | 0 | G | . | 97.5% | 504.4 / 7.5 | 122 | intergenic (‑111/+56) | yaiN/yaiO | putative alpha helix chain/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (3/0); new base . (73/43); total (76/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.85e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
GTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCA > NC_000913/379145‑379327 | gTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAg > 2:2736661/1‑93 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgg < 2:3394266/93‑1 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgg > 2:2067327/1‑93 (MQ=255) tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgg > 1:2362047/1‑93 (MQ=255) aTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggg > 2:2521773/1‑93 (MQ=255) aTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggg > 2:4018445/1‑93 (MQ=255) aTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggg > 2:2030238/1‑93 (MQ=255) ttCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggg > 2:187525/1‑93 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg < 2:1366448/93‑1 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg < 1:3879004/93‑1 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg > 2:2591540/1‑93 (MQ=255) tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg < 1:1800618/93‑1 (MQ=255) atatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggg < 1:1541491/93‑1 (MQ=255) atatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGA‑‑GTGGTCGGGAAACAAAGAGGAAAgggggggggg > 1:4344914/1‑93 (MQ=255) atGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggggct > 2:1030172/1‑91 (MQ=255) tGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggct > 1:2129770/1‑91 (MQ=255) tGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggct < 2:1386928/93‑3 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggcta > 1:3678822/1‑90 (MQ=255) gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggcta < 2:1522557/93‑4 (MQ=255) cAATGCATACCCCCCTATAGTATATACCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAAt < 1:3673873/93‑1 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAAt < 1:1959530/93‑1 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATc > 1:1977910/1‑93 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATc > 1:114457/1‑93 (MQ=255) cATCCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCa < 1:4384771/93‑1 (MQ=255) tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAgg > 1:4020554/1‑93 (MQ=255) tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAgg > 1:2858744/1‑93 (MQ=255) ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGa > 1:2080539/1‑93 (MQ=255) cccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGaa < 1:2795838/93‑1 (MQ=255) cccccTATAGTAAATAACACTGGAGAATAAAATTTATCGGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGaa < 1:1004037/93‑1 (MQ=255) cccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCAATTGggaagggaag > 2:1943808/1‑93 (MQ=255) ccTATAGTATATAACACTGGAGAATAGAAGGTATCCGGTGAATGTGATCGGAAAACAAAGAGCAAA‑GGGGGGCTGCTAATCGGCAGGGAAGgc < 2:549221/93‑1 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgc > 2:1857888/1‑93 (MQ=255) cTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGGAGgcc > 1:4137978/1‑93 (MQ=255) ataGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCCAATCGGCAGGGGAGggcgc > 2:1424448/1‑93 (MQ=255) taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgcccac > 1:3555379/1‑90 (MQ=255) aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGccc > 1:4465590/1‑93 (MQ=255) aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGcccc > 1:2441511/1‑93 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCcccccc > 2:1055154/1‑93 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc > 2:3101548/1‑93 (MQ=255) gTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc > 1:3249743/1‑93 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGGCGCCCCg > 2:1701517/1‑93 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg > 1:1878764/1‑93 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg > 2:3277109/1‑93 (MQ=255) tatataACACGGGAAAAAAAATTTTATGGGGTAAATGTGGTCGAAAAAAAAAGA‑GAAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCg < 2:4039762/93‑1 (MQ=255) atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg > 1:363428/1‑93 (MQ=255) ataaaACACTGGAAAAAAAATTTTATCCGGTGAATGTGGCGGAAAAAAAAAGAGGAA‑‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa < 2:3300456/93‑1 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:2112252/1‑93 (MQ=255) ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGAt < 1:404388/93‑1 (MQ=255) ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCCGAt > 1:1883909/1‑93 (MQ=255) taACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa > 1:567333/1‑93 (MQ=255) aaCACTGAAGAATAAAATTTATCCGGTGAATGGCGTCGTAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg < 2:1216630/93‑1 (MQ=255) acgggAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg < 2:3609392/90‑1 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggg > 1:3884969/1‑92 (MQ=255) agaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:4556010/1‑93 (MQ=255) gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 2:4245396/1‑93 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGGAg > 1:1025252/1‑93 (MQ=255) aTAAATTTTTTCCGGTGAATGTCGGCGAAAAACAAAGGGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 2:832564/93‑1 (MQ=255) aTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa > 2:215763/1‑93 (MQ=255) tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa > 2:4650596/1‑93 (MQ=255) aaaaaTTTATCGGGTGAATGTGGTCGAAAAACAAAGGGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:115002/92‑1 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAgg > 1:1838669/1‑93 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCCGGTACGGGGAGGCAGaaag > 2:3994623/1‑91 (MQ=255) aaTTTATCCGGTGAATGTGGTCGAAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGa < 1:3850021/93‑1 (MQ=255) tttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt > 1:741328/1‑93 (MQ=255) tttATCCGGGGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCggaaggaaa > 2:4675926/1‑92 (MQ=255) tATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGGAGAAGGAATCa > 2:3031852/1‑93 (MQ=255) tCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 2:589961/1‑93 (MQ=255) ccGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 2:4436216/1‑93 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAttt < 2:1497539/93‑1 (MQ=255) gTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAttt > 1:2248295/1‑93 (MQ=255) ggAATGTGTTGGGAAAGAAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑c < 2:943828/92‑1 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑cc > 2:3174105/1‑93 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCa > 1:4623829/1‑93 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAg > 2:433764/1‑93 (MQ=255) aaTGTGGGGGGAAAAAAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCa < 2:4063397/93‑1 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGGTAGCGGGCGGCAGAAGGAATCAGAATTT‑CCa > 1:4115752/1‑93 (MQ=255) tgtcGTCGCAAAAAAAAGAGGAAA‑GGGGGTGGGCTAATCGGCAGGGAAGGCCGACCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAgg < 1:4405441/93‑1 (MQ=255) tgGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGGATCAGAATTT‑CCAgggc > 1:1331591/1‑91 (MQ=255) tgGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTc < 1:3534550/93‑1 (MQ=255) tgGACGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTc < 1:2845778/93‑1 (MQ=255) tCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGa > 1:1849639/1‑93 (MQ=255) cGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGAc < 1:1510259/93‑1 (MQ=255) ggAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACg > 1:1989875/1‑93 (MQ=255) gAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCCGGTCAGACgg > 2:1124190/1‑93 (MQ=255) gAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACgg < 2:2222272/93‑1 (MQ=255) gAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAATT‑CCAGGTCAGACgg > 1:3321271/1‑93 (MQ=255) gAAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACggg < 1:4010814/93‑1 (MQ=255) aaaCAAAGAGGAAA‑GGGGGGGGGTTAATCGGCAGGGAAGGCCCCCCCGGATAGCGGGGGGCACAGGGAATAAGAATTT‑TCAGGTGCGACGGGc > 2:342818/1‑93 (MQ=255) aaaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGc < 1:958402/93‑1 (MQ=255) aaaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGc > 2:2167476/1‑93 (MQ=255) aaaCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCCCCCCGGATAGCCGGCGGGAGAAGGAATCAGAATTT‑TCAGGGCAGACGGGc > 1:1952922/1‑93 (MQ=255) accAAAGAGGAGA‑GGGGGGGTCCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGCCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCt < 2:2697436/91‑1 (MQ=255) aCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCCCCCCGGATAGCGGGCGGCGGAAGGAATCAGAATTTCCCGGGTCA‑ACGGGCtc > 2:74177/1‑92 (MQ=255) aaGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCaa < 2:2135385/93‑1 (MQ=255) agagGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGGCGCCCCGGGTAGCGGGCGGCAGGAGGAATGAGGATTT‑CCAAGTCAGAAGGGCTGGAAg > 1:3806871/1‑93 (MQ=255) agagGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAg > 1:3172720/1‑93 (MQ=255) agagGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAg > 2:3173242/1‑93 (MQ=255) agGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGtt < 1:204724/93‑1 (MQ=255) agGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGtt < 1:1275671/93‑1 (MQ=255) gagggggggggggCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGc < 1:3189895/90‑1 (MQ=255) | GTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTT‑CCAGGTCAGACGGGCTGCAAGTTGCA > NC_000913/379145‑379327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |