BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,021,684	Δ1 bp	coding (542/609 nt)\|coding (1/243 nt)	b4556 → tatD →	hypothetical protein Mg‑dependent DNase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,021,683	0	C	.	100.0%	866.5 / NA	190	coding (541/609 nt)	b4556	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (97/93); total (97/93)

Only 100 of 205 total aligned reads displayed.

TCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCT  >  NC_000913/4021592‑4021770

tcttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAAcg                                                                                        >  2:172103/1‑92 (MQ=255)

 cttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAAcga                                                                                       <  2:4460882/93‑3 (MQ=255)

 cttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAAcga                                                                                       <  1:470758/93‑3 (MQ=255)

   tcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAAcgacg                                                                                     >  2:1517654/1‑89 (MQ=255)

    cATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGAcgc                                                                                   <  1:2292627/93‑1 (MQ=255)

     aTTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGTA‑CGAcgcg                                                                                  >  2:2342379/1‑93 (MQ=255)

        gCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGACGAA‑CGACGCGGAc                                                                               >  1:1956815/1‑93 (MQ=255)

         cTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACt                                                                              >  2:2812012/1‑93 (MQ=255)

          tttACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                                             >  1:1277919/1‑93 (MQ=255)

          tttACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                                             >  1:1448913/1‑93 (MQ=255)

          tttACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                                             <  2:33163/93‑1 (MQ=255)

             aCCGGCACACGCGAAGAGATGCAGGCGAGCGTGGCGCATGGAATTTATATAGGCATT‑ACCGGTTAGGTTTGCGATGCA‑CGACGCGGACTggtg                                                                          >  2:463558/1‑91 (MQ=255)

              ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                         <  1:1947128/93‑1 (MQ=255)

              ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                         <  1:7462/93‑1 (MQ=255)

              ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                         <  2:1068139/93‑1 (MQ=255)

              ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                         <  2:2583704/93‑1 (MQ=255)

              ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                         >  2:3444043/1‑93 (MQ=255)

                ggCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTg                                                                       >  1:1715933/1‑93 (MQ=255)

                ggCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTg                                                                       >  1:2630531/1‑93 (MQ=255)

                 gCAGACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                                      <  1:964301/93‑1 (MQ=255)

                 gCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                                      <  2:2666323/93‑1 (MQ=255)

                 gCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                                      <  1:1818370/93‑1 (MQ=255)

                 gCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                                      >  2:359683/1‑93 (MQ=255)

                 gCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGc                                                                      >  1:2558695/1‑93 (MQ=255)

                  cacaCGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCg                                                                     >  1:1224803/1‑93 (MQ=255)

                   acacGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCgg                                                                    >  2:4393169/1‑93 (MQ=255)

                   acacGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCgg                                                                    >  1:4191563/1‑93 (MQ=255)

                    cacGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCggg                                                                   >  2:3138147/1‑93 (MQ=255)

                        cgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACt                                                               <  2:917588/93‑1 (MQ=255)

                         gAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtt                                                              <  1:2030221/93‑1 (MQ=255)

                          aaGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACttt                                                             <  1:2730055/93‑1 (MQ=255)

                           agagATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtttt                                                            <  2:1295947/93‑1 (MQ=255)

                            gagaTGCAGGCGTGCGTGGCGCATGGAATTTATGTCGGCATT‑ACGGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTg                                                           <  2:1935775/93‑1 (MQ=255)

                            gagaTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTAACCGGTTGGG‑TTGGGGTGGA‑CGACAGGGACTGGGGGCTCGGGAACttttc                                                           >  2:3073939/1‑92 (MQ=255)

                              gaTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGGACTTTTGcc                                                         >  2:539402/1‑93 (MQ=255)

                              gaTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGcc                                                         <  1:161252/93‑1 (MQ=255)

                                tGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGt                                                       <  2:609231/93‑1 (MQ=255)

                                  cAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTg                                                     >  1:2589909/1‑93 (MQ=255)

                                   aGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGa                                                    >  1:4486560/1‑93 (MQ=255)

                                    ggCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGAt                                                   <  1:4600785/93‑1 (MQ=255)

                                      cgtgcgtgGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTc                                                 <  2:2353712/93‑1 (MQ=255)

                                       gtgcgtgGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTcc                                                <  1:2246157/93‑1 (MQ=255)

                                       gtgcgtgGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTcc                                                >  2:3055302/1‑93 (MQ=255)

                                         gcgtgGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcgg                                              >  2:3382601/1‑93 (MQ=255)

                                            tgGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcgg                                           >  2:1769750/1‑93 (MQ=255)

                                             ggCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGTCGTTGATTCCGGCGGa                                          >  1:2176352/1‑93 (MQ=255)

                                             ggCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGa                                          >  1:2286069/1‑93 (MQ=255)

                                                gcATGGAATTTATATCGGCATT‑ACGGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                                       <  2:3516245/93‑1 (MQ=255)

                                                gcATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                                       >  1:100884/1‑93 (MQ=255)

                                                gcATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                                       >  1:1999522/1‑93 (MQ=255)

                                                gcATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                                       >  1:3138506/1‑93 (MQ=255)

                                                 cATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaaa                                      >  1:1303757/1‑93 (MQ=255)

                                                  aTGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                     >  2:3488014/1‑93 (MQ=255)

                                                  aTGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                     >  1:1732321/1‑93 (MQ=255)

                                                  aTGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                     >  1:3865234/1‑93 (MQ=255)

                                                  aTGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                     >  1:2375077/1‑93 (MQ=255)

                                                  aTGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                     <  2:2053396/93‑1 (MQ=255)

                                                   tGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAtt                                    >  2:1396403/1‑93 (MQ=255)

                                                    ggAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGTAAAATTa                                   >  2:4417417/1‑93 (MQ=255)

                                                    ggAATTTAGATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTa                                   <  2:2274706/93‑1 (MQ=255)

                                                     gAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTAc                                  <  1:834736/93‑1 (MQ=255)

                                                     gAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTAc                                  >  1:1067769/1‑93 (MQ=255)

                                                     gAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTAc                                  >  2:263415/1‑93 (MQ=255)

                                                       aTTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTg                                >  2:3208578/1‑93 (MQ=255)

                                                       aTTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTg                                >  1:4322995/1‑93 (MQ=255)

                                                       aTTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTg                                <  1:3453739/93‑1 (MQ=255)

                                                        tttATATCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGa                               >  2:122746/1‑93 (MQ=255)

                                                          tataTCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc                             <  2:1739366/93‑1 (MQ=255)

                                                          tataTCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc                             <  1:4256245/93‑1 (MQ=255)

                                                            tatCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGa                           >  1:3161007/1‑93 (MQ=255)

                                                            tatCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGa                           <  1:1531124/93‑1 (MQ=255)

                                                              tCGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGaaa                         <  2:767717/93‑1 (MQ=255)

                                                               cGGCATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAAc                        <  1:3395077/93‑1 (MQ=255)

                                                                  cATT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGa                     <  1:3149247/93‑1 (MQ=255)

                                                                   aTT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAt                    <  2:1476670/93‑1 (MQ=255)

                                                                   aTT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAt                    >  1:3787526/1‑93 (MQ=255)

                                                                   aTT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAt                    <  2:1111308/93‑1 (MQ=255)

                                                                   aTT‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAt                    >  2:1898921/1‑93 (MQ=255)

                                                                     t‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgg                  >  1:3409525/1‑92 (MQ=255)

                                                                     t‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgc                  <  2:3759878/93‑1 (MQ=255)

                                                                     t‑ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgc                  <  1:1123824/93‑1 (MQ=255)

                                                                         cGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGcc               <  2:2105174/93‑1 (MQ=255)

                                                                          ggTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCg              >  1:3948232/1‑93 (MQ=255)

                                                                          ggTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCg              >  1:1745720/1‑93 (MQ=255)

                                                                           gTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGt             >  2:819180/1‑93 (MQ=255)

                                                                            ttGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTa            <  1:561938/93‑1 (MQ=255)

                                                                            ttGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTa            <  1:2310526/93‑1 (MQ=255)

                                                                              gggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATc          <  1:3709984/93‑1 (MQ=255)

                                                                              gggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATc          <  1:2137141/93‑1 (MQ=255)

                                                                              gggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATc          <  2:3959174/93‑1 (MQ=255)

                                                                              gggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATc          >  1:606541/1‑93 (MQ=255)

                                                                               ggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCt         >  1:2604195/1‑93 (MQ=255)

                                                                                gTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTg        <  1:3078794/93‑1 (MQ=255)

                                                                                 tttGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGc       <  1:3006764/93‑1 (MQ=255)

                                                                                 tttGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGc       <  1:1801897/93‑1 (MQ=255)

                                                                                  ttGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCt      <  2:2126547/93‑1 (MQ=255)

                                                                                   tGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTc     <  2:4550623/93‑1 (MQ=255)

                                                                                    gCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTcc    <  2:4195980/93‑1 (MQ=255)

                                                                                     cGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTccc   >  2:2152800/1‑93 (MQ=255)

                                                                                      gATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCt  >  2:4366058/1‑93 (MQ=255)

TCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATT‑ACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCT  >  NC_000913/4021592‑4021770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`