BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	867,645	(C)_8→7	coding (870/1839 nt)	b0829 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	867,638	0	C	.	96.8%	532.5 / 6.0	126	coding (863/1839 nt)	b0829	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (2/2); new base . (67/55); total (69/57)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 143 total aligned reads displayed.

GTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGT  >  NC_000913/867546‑867726

gTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGc                                                                                          <  2:3466214/93‑1 (MQ=255)

gTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGc                                                                                          >  2:3382682/1‑93 (MQ=255)

 ttAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcc                                                                                         >  1:42946/1‑93 (MQ=255)

    gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccc                                                                                      <  1:4621523/93‑1 (MQ=255)

    gctgctGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccc                                                                                      <  1:3418543/93‑1 (MQ=255)

     ctgctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAAGATCCAGCGAAACAGCcccccc                                                                                     >  1:3878660/1‑93 (MQ=255)

       gctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccccca                                                                                   <  1:3609839/93‑2 (MQ=255)

       gctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccccca                                                                                   <  1:1646981/93‑2 (MQ=255)

       gctgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGccccccca                                                                                   >  2:787923/1‑92 (MQ=255)

         tgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAAGATCCAGCGAAACAGGcccccccatc                                                                                 >  1:4073234/1‑90 (MQ=255)

         tgTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatc                                                                                 <  2:638634/93‑4 (MQ=255)

          gTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGcccccccatcg                                                                                >  2:3848055/1‑89 (MQ=255)

            tCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAg                                                                             <  1:1406823/93‑1 (MQ=255)

            tCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAg                                                                             >  1:589227/1‑93 (MQ=255)

              cGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCa                                                                           >  2:405764/1‑93 (MQ=255)

               gCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAg                                                                          <  2:4328272/93‑1 (MQ=255)

                cAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGa                                                                         <  2:2650124/93‑1 (MQ=255)

                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                       >  1:2934239/1‑93 (MQ=255)

                  aCTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGaaa                                                                       <  2:3208355/93‑1 (MQ=255)

                    ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAAc                                                                     <  2:2902375/93‑1 (MQ=255)

                    ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAAc                                                                     >  1:1743944/1‑93 (MQ=255)

                    ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAAc                                                                     >  2:4011329/1‑93 (MQ=255)

                    ttGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTGGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAAc                                                                     <  2:3826803/93‑1 (MQ=255)

                    ttGGTGCGATGAAAGGGTTAGATTACCCCCGACGTTTCCCGTTGATATCGCTTGACCATCCAGCGAAACAGGCCCCCCCCATCGAGCAGaaaa                                                                      <  1:1318252/93‑1 (MQ=255)

                         gCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACggtgg                                                                <  2:2635798/93‑1 (MQ=255)

                         gCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACggtgg                                                                >  2:1022020/1‑93 (MQ=255)

                           gATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGgtggtg                                                              >  1:3776076/1‑93 (MQ=255)

                           gATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGgtggtg                                                              >  1:2025408/1‑93 (MQ=255)

                           gATGAAAGGGTTAGATTATCACCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGgtggtg                                                              <  1:426342/93‑1 (MQ=255)

                             tGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGa                                                            >  1:53535/1‑93 (MQ=255)

                              gAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGAt                                                           >  1:725461/1‑93 (MQ=255)

                               aaaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATg                                                          >  1:3170438/1‑93 (MQ=255)

                               aaaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATg                                                          >  1:3702219/1‑93 (MQ=255)

                                aaGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATgg                                                         <  1:4317320/93‑1 (MQ=255)

                                 aGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGc                                                        >  2:782325/1‑93 (MQ=255)

                                  gggTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCTAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg                                                       >  1:3409251/1‑93 (MQ=255)

                                  gggTTAGATTAACCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCg                                                       <  2:2688170/93‑1 (MQ=255)

                                    gTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCgca                                                     >  2:1807982/1‑91 (MQ=255)

                                     ttAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCC‑TCGAGCAGAAAACGGTGGTGGATGGCGAAc                                                    >  2:4388532/1‑93 (MQ=255)

                                     ttAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAAc                                                    >  1:291969/1‑93 (MQ=255)

                                       aGATGATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCt                                                  <  2:2034707/93‑1 (MQ=255)

                                          ttATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtt                                               <  1:990994/93‑1 (MQ=255)

                                          ttATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtt                                               <  2:3157192/93‑1 (MQ=255)

                                          ttATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtt                                               >  2:1977671/1‑93 (MQ=255)

                                          ttATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGtt                                               <  1:4471035/93‑1 (MQ=255)

                                           tATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGttt                                              <  1:2197100/93‑1 (MQ=255)

                                           tATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGttt                                              >  1:723746/1‑93 (MQ=255)

                                             tCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGTAGAAAACGTAGGTGGATGGCGGACCAGTTTTa                                            >  2:1270117/1‑93 (MQ=255)

                                             tCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTa                                            >  2:1506111/1‑93 (MQ=255)

                                             tCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTa                                            <  1:4188960/93‑1 (MQ=255)

                                             tCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTa                                            <  1:3076917/93‑1 (MQ=255)

                                              ccccTACCTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTAc                                           <  2:1363902/93‑1 (MQ=255)

                                               cccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCAAACCTGTTTTACg                                          >  1:2699325/1‑93 (MQ=255)

                                                ccGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCACCCATCGAGAAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGa                                         <  1:4685961/93‑1 (MQ=255)

                                                 cGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAg                                        >  1:1151078/1‑93 (MQ=255)

                                                 cGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAg                                        >  1:2450102/1‑93 (MQ=255)

                                                 cGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAg                                        >  2:4025412/1‑93 (MQ=255)

                                                  gACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGt                                       >  1:2155133/1‑93 (MQ=255)

                                                   aCGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTg                                      >  1:1324988/1‑93 (MQ=255)

                                                    cGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGc                                     <  2:2316004/93‑1 (MQ=255)

                                                       ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa                                  >  1:1143075/1‑93 (MQ=255)

                                                       ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa                                  <  1:1561836/93‑1 (MQ=255)

                                                       ttCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTa                                  <  2:479456/93‑1 (MQ=255)

                                                        tCCCGTTGATATCGCTTGAACATCTAGCGAAACAGG‑CCCCCCCAACGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTaa                                 <  2:3692484/93‑1 (MQ=255)

                                                        tCCCGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTaa                                 >  1:3573882/1‑93 (MQ=255)

                                                         cccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAAt                                <  1:3023020/93‑1 (MQ=255)

                                                         cccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAAt                                >  1:1831157/1‑93 (MQ=255)

                                                          ccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATc                               <  2:2976887/93‑1 (MQ=255)

                                                          ccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATc                               >  2:660383/1‑93 (MQ=255)

                                                          ccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATc                               >  2:576672/1‑93 (MQ=255)

                                                          ccGTTGATATCGCTTGAACATCCAGCGAAACAGG‑‑CCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCt                              <  1:283163/93‑1 (MQ=255)

                                                            gTTGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCtt                             <  1:17567/93‑1 (MQ=255)

                                                             ttGATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGCGGTGGATTGCGAACCTGTTTTACGAGCGCGTAGTCTTg                            >  1:2797864/1‑93 (MQ=255)

                                                               gATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTc                          >  1:4353372/1‑93 (MQ=255)

                                                               gATATCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTc                          >  2:4160031/1‑93 (MQ=255)

                                                                atatCGCTTGAACATCCAGCGAAACCGG‑CCCCCCCATCGAGCAGAAAGCGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCa                         <  2:973362/93‑1 (MQ=255)

                                                                atatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCa                         >  2:4142279/1‑93 (MQ=255)

                                                                 tatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAc                        <  2:1257338/93‑1 (MQ=255)

                                                                 tatCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAc                        <  1:4140769/93‑1 (MQ=255)

                                                                  atCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAcc                       >  2:1865679/1‑93 (MQ=255)

                                                                  atCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAcc                       <  1:3829995/93‑1 (MQ=255)

                                                                   tCGCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCAccc                      <  2:3372973/93‑1 (MQ=255)

                                                                     gCTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGt                    <  1:4630258/93‑1 (MQ=255)

                                                                      ctcgAACATCCAGCCAAACA‑GCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGtt                   <  1:1772705/90‑1 (MQ=255)

                                                                      cTTGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGtt                   <  1:2476620/93‑1 (MQ=255)

                                                                       ttGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTTCGAGTGGGTAATCTTGTCATCCGttt                  >  2:1809981/1‑93 (MQ=255)

                                                                       ttGAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGttt                  >  1:1691745/1‑93 (MQ=255)

                                                                         gAACATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCCCCCGTTTcc                <  1:4291994/93‑1 (MQ=255)

                                                                           aCATCCAGCGAAACAGG‑CCCCCCCATCGATCAGAAAACGGTGGTGGATGGCTAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCt              <  2:361059/93‑1 (MQ=255)

                                                                           aCATCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCt              >  1:2581267/1‑93 (MQ=255)

                                                                              tCCAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTg           >  2:548957/1‑93 (MQ=255)

                                                                               ccAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgc          <  2:975967/93‑1 (MQ=255)

                                                                               ccAGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgc          <  2:238439/93‑1 (MQ=255)

                                                                                 aGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgcgc        <  1:2674385/93‑1 (MQ=255)

                                                                                 aGCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTgcgc        >  1:4460504/1‑93 (MQ=255)

                                                                                  gCGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCa       >  1:2296921/1‑93 (MQ=255)

                                                                                   cGAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAg      <  1:1399651/93‑1 (MQ=255)

                                                                                    gAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGc     <  1:109875/93‑1 (MQ=255)

                                                                                    gAAACAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGc     <  2:1150909/93‑1 (MQ=255)

                                                                                       aCAGG‑CCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGt  <  1:1618516/93‑1 (MQ=255)

GTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGT  >  NC_000913/867546‑867726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`