Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 871,382 Δ1 bp coding (270/912 nt) b0832 → putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913871,3790G.99.3% 638.6 / ‑3.0 142coding (267/912 nt)b0832putative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base . (85/56);  minor base A (1/0);  total (86/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 159 total aligned reads displayed.

TGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATCG  >  NC_000913/871287‑871467
                                                                                            |                                                                                        
tGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTg                                                                                          >  1:371208/1‑93 (MQ=255)
 ggATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTgg                                                                                         <  1:1294349/93‑1 (MQ=255)
 ggATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTgg                                                                                         >  2:2451811/1‑93 (MQ=255)
 ggATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTgg                                                                                         <  2:2691317/93‑1 (MQ=255)
 ggATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTgg                                                                                         >  1:1849190/1‑93 (MQ=255)
     cGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTgggcgt                                                                                     <  2:942555/93‑4 (MQ=255)
      gCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTgggcgtg                                                                                    >  2:2353952/1‑89 (MQ=255)
      gCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTgggcgtg                                                                                    >  1:1000300/1‑89 (MQ=255)
       cTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGa                                                                                  >  1:2754797/1‑93 (MQ=255)
         cccTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACa                                                                                >  2:4219864/1‑93 (MQ=255)
         cccTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACa                                                                                >  2:152885/1‑93 (MQ=255)
          ccTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACAt                                                                               <  2:4002151/93‑1 (MQ=255)
          ccTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACAt                                                                               <  1:3661409/93‑1 (MQ=255)
          ccTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACAt                                                                               >  1:4260543/1‑93 (MQ=255)
             aTGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACAtttt                                                                            >  1:3060370/1‑93 (MQ=255)
             aTGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACAtttt                                                                            >  2:1270644/1‑93 (MQ=255)
                 cGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGc                                                                        <  1:3364768/93‑1 (MQ=255)
                  gCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGcc                                                                       >  1:97645/1‑93 (MQ=255)
                  gCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGcc                                                                       >  2:4253181/1‑93 (MQ=255)
                   ccGAAAATTATTTTGATTATGACAACCTGAATAACGGACCTACTTGGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCg                                                                      <  2:3365346/93‑1 (MQ=255)
                    cGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCgt                                                                     >  1:3139076/1‑93 (MQ=255)
                    cGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCgt                                                                     >  2:789089/1‑93 (MQ=255)
                    cGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCgt                                                                     >  1:1561002/1‑93 (MQ=255)
                    cGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCgt                                                                     <  2:3936115/93‑1 (MQ=255)
                     gAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCgtg                                                                    >  2:1602141/1‑93 (MQ=255)
                     gAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCgtg                                                                    >  1:1402100/1‑93 (MQ=255)
                     gAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCgtg                                                                    >  1:3939637/1‑93 (MQ=255)
                        aaTTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTcc                                                                 <  1:891881/93‑1 (MQ=255)
                         attattTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCt                                                                >  1:3800676/1‑93 (MQ=255)
                         attattTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCt                                                                >  2:2072356/1‑93 (MQ=255)
                          ttattTTGATTATGACAATCTGAATAGCGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtg                                                               <  2:3796364/93‑1 (MQ=255)
                          ttattTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtg                                                               <  2:2269062/93‑1 (MQ=255)
                          ttattTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtg                                                               >  2:600563/1‑93 (MQ=255)
                            attTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtggt                                                             >  1:355649/1‑93 (MQ=255)
                             ttttGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtggtt                                                            >  2:4455333/1‑93 (MQ=255)
                             ttttGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtggtt                                                            <  2:2974489/93‑1 (MQ=255)
                              tttGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtggttg                                                           >  2:765097/1‑93 (MQ=255)
                                tGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCtggttggt                                                         <  1:525672/93‑1 (MQ=255)
                                 gATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTg                                                        <  2:1381109/93‑1 (MQ=255)
                                 gATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTg                                                        >  2:1914110/1‑93 (MQ=255)
                                 gATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTg                                                        >  1:3153634/1‑93 (MQ=255)
                                  aTTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTgc                                                       <  2:2942506/93‑1 (MQ=255)
                                  aTTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTgc                                                       >  1:756466/1‑93 (MQ=255)
                                    tATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTgcgc                                                     >  1:4345395/1‑93 (MQ=255)
                                    tATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTgcgc                                                     >  1:2576604/1‑93 (MQ=255)
                                      tGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCaa                                                   >  1:3419232/1‑93 (MQ=255)
                                      tGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCaa                                                   >  1:159340/1‑93 (MQ=255)
                                       gACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCaaa                                                  >  2:2789095/1‑93 (MQ=255)
                                        aCAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAAt                                                 <  1:4554603/93‑1 (MQ=255)
                                         cAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAAtc                                                >  2:2349412/1‑93 (MQ=255)
                                          aaTCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAAtct                                               >  1:3598189/1‑93 (MQ=255)
                                              tGAATAATGGACCTTCTTTGTAGCACTGGTTTGGCGTCGATGCACAGGGCGTTACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGcg                                           >  1:4685350/1‑92 (MQ=255)
                                              tGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCt                                           >  2:3923587/1‑93 (MQ=255)
                                              tGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCt                                           >  2:229432/1‑93 (MQ=255)
                                              tGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCt                                           >  2:359124/1‑93 (MQ=255)
                                               gAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTg                                          <  2:4600941/93‑1 (MQ=255)
                                                 aTAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTggc                                        >  2:325335/1‑93 (MQ=255)
                                                  tAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTggcg                                       >  2:1278006/1‑93 (MQ=255)
                                                   aaCGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTggcgg                                      >  1:325898/1‑93 (MQ=255)
                                                    aCGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTggcggg                                     >  2:4377947/1‑92 (MQ=255)
                                                    aCGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTggcggc                                     >  2:4104444/1‑93 (MQ=255)
                                                    aCGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTggcggc                                     >  1:1779030/1‑93 (MQ=255)
                                                       gACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCggcggg                                  >  1:4071207/1‑93 (MQ=255)
                                                        gccTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCggcgggc                                 <  2:1612185/92‑1 (MQ=255)
                                                         ccTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCggcgggcg                                >  2:3448240/1‑93 (MQ=255)
                                                         ccTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCggcgggcg                                >  1:4245925/1‑93 (MQ=255)
                                                         ccTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCggcgggcg                                >  1:3242657/1‑93 (MQ=255)
                                                          cttcttTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCgt                               >  1:2206493/1‑93 (MQ=255)
                                                          cttcttTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCgt                               <  2:1305885/93‑1 (MQ=255)
                                                           ttcttTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCgtg                              >  1:3007766/1‑93 (MQ=255)
                                                           ttcttTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCgtg                              >  1:727702/1‑93 (MQ=255)
                                                           ttcttTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCgtg                              <  2:2473638/93‑1 (MQ=255)
                                                           ttcttTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCgtg                              >  1:335695/1‑93 (MQ=255)
                                                             cttTGCAGCACTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGtt                            <  2:3087226/93‑1 (MQ=255)
                                                                 gcagcaCTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCTGGCGTGTTTGcc                        >  1:4385495/1‑93 (MQ=255)
                                                                 gcagcaCTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGcc                        >  1:621058/1‑93 (MQ=255)
                                                                   agcaCTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCgt                      <  2:2831886/93‑1 (MQ=255)
                                                                    gcaCTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCgtg                     >  2:1489165/1‑93 (MQ=255)
                                                                     caCTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCgtgt                    <  2:1079589/93‑1 (MQ=255)
                                                                      aCTGGTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTCGCGGCGGGCGTGCTTGCCGTGtt                   >  1:1546432/1‑93 (MQ=255)
                                                                         ggTTTGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTAt                >  2:1990311/1‑93 (MQ=255)
                                                                           tttGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCg              <  1:3861351/93‑1 (MQ=255)
                                                                           tttGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCg              <  1:2419285/93‑1 (MQ=255)
                                                                            ttGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCgg             <  1:2007146/93‑1 (MQ=255)
                                                                            ttGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCgg             <  1:1133718/93‑1 (MQ=255)
                                                                             tGGCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGt            <  1:3953129/93‑1 (MQ=255)
                                                                              ggCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTg           >  2:4184719/1‑93 (MQ=255)
                                                                              ggCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTg           >  1:3254237/1‑93 (MQ=255)
                                                                              ggCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGGGTTTGCCGTGTTTATCGGTg           >  1:1269263/1‑93 (MQ=255)
                                                                               gCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTgc          <  1:2758483/93‑1 (MQ=255)
                                                                               gCGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTgc          <  1:1422179/93‑1 (MQ=255)
                                                                                cGTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTgcg         <  1:939444/93‑1 (MQ=255)
                                                                                 gTCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTgcgg        <  2:1581440/93‑1 (MQ=255)
                                                                                  tCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTgcggc       <  1:2265295/93‑1 (MQ=255)
                                                                                  tCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTgcggc       <  1:3855671/93‑1 (MQ=255)
                                                                                  tCGATTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTgcggc       >  2:3432067/1‑93 (MQ=255)
                                                                                     aTTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGAt    <  1:450589/93‑1 (MQ=255)
                                                                                     aTTCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGAt    <  1:218213/93‑1 (MQ=255)
                                                                                      ttCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATc   >  2:649216/1‑93 (MQ=255)
                                                                                       tCACTGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGGGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGAttg  <  2:3842937/93‑3 (MQ=255)
                                                                                            |                                                                                        
TGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATCG  >  NC_000913/871287‑871467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: