BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	888,802	(A)_7→6	coding (241/1686 nt)	b0847 ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	888,796	0	A	.	100.0%	659.1 / NA	144	coding (247/1686 nt)	b0847	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (79/65); total (79/65)

Only 100 of 164 total aligned reads displayed.

CAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGT  >  NC_000913/888704‑888884

 aGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATGTTTCCCATCGCGAAAAAAAATGGaa                                                                                         >  1:4682110/1‑93 (MQ=255)

  gCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaa                                                                                        >  1:4540085/1‑93 (MQ=255)

  gCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaa                                                                                        >  1:2261159/1‑93 (MQ=255)

     tACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaa                                                                                     >  1:696362/1‑93 (MQ=255)

     tACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaa                                                                                     <  1:1770335/93‑1 (MQ=255)

     tACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaa                                                                                     <  2:3010738/93‑1 (MQ=255)

      aCCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaag                                                                                    <  1:1377995/93‑2 (MQ=255)

      aCCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaag                                                                                    <  2:1646169/93‑2 (MQ=255)

       ccTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagt                                                                                   <  1:2663992/93‑3 (MQ=255)

         tAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagttc                                                                                 <  2:3668148/93‑5 (MQ=255)

         tAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagttc                                                                                 >  1:3471813/1‑89 (MQ=255)

         tAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGaaaaaagttc                                                                                 <  2:1817444/93‑5 (MQ=255)

          aaCCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCTCGAAAAAAAATGG‑AAAAAAGTTCg                                                                               >  2:3339648/1‑93 (MQ=255)

            cccTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGt                                                                             <  1:2330014/93‑1 (MQ=255)

             ccTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTc                                                                            >  1:553990/1‑93 (MQ=255)

              cTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAGATGG‑AAAAAAGTTCGGTcc                                                                           <  2:4572733/93‑1 (MQ=255)

              cTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTcc                                                                           <  2:641266/93‑1 (MQ=255)

              cTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTcc                                                                           >  1:4152192/1‑93 (MQ=255)

              cTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTcc                                                                           >  1:3422169/1‑93 (MQ=255)

                 aGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGc                                                                        <  1:1462710/93‑1 (MQ=255)

                  ggCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCt                                                                       <  2:2761612/93‑1 (MQ=255)

                  ggCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCt                                                                       <  1:2822444/93‑1 (MQ=255)

                  ggCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCt                                                                       <  1:1393643/93‑1 (MQ=255)

                  agccaTCACCAGCGCACTGCCAACCATCACCAGTTCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCt                                                                       <  2:2094785/89‑1 (MQ=255)

                     gATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCg                                                                    <  2:2039490/93‑1 (MQ=255)

                      aTCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGa                                                                   >  1:870664/1‑93 (MQ=255)

                      aTCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGa                                                                   >  1:3702993/1‑93 (MQ=255)

                      aTCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGa                                                                   >  2:4508120/1‑93 (MQ=255)

                        cACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGAcc                                                                 <  1:1992042/93‑1 (MQ=255)

                             gcgcACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGAc                                                            <  2:3811458/93‑1 (MQ=255)

                               gcACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGc                                                          >  1:4465158/1‑93 (MQ=255)

                               gcACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTACGGTCCGGCTTCGACCCCGACGc                                                          <  2:3784183/93‑1 (MQ=255)

                                cACTGCCACCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCa                                                         <  1:3668208/93‑1 (MQ=255)

                                cACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCa                                                         >  1:1349047/1‑93 (MQ=255)

                                 aCTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAg                                                        >  1:990874/1‑93 (MQ=255)

                                      cAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAAt                                                   <  1:1051650/93‑1 (MQ=255)

                                      cAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAAt                                                   >  2:3387176/1‑93 (MQ=255)

                                       aaCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATa                                                  >  2:3231751/1‑93 (MQ=255)

                                       aaCCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATa                                                  >  2:1342037/1‑93 (MQ=255)

                                         ccATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATaaa                                                >  2:1152040/1‑93 (MQ=255)

                                         ccATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATaaa                                                <  2:26450/93‑1 (MQ=255)

                                          cATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAAc                                               <  1:1951178/93‑1 (MQ=255)

                                           aTCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACa                                              <  2:4365470/93‑1 (MQ=255)

                                           aTCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACa                                              <  2:1629659/93‑1 (MQ=255)

                                           aTCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACa                                              <  1:2301674/93‑1 (MQ=255)

                                             cACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGc                                            <  1:1093509/93‑1 (MQ=255)

                                             cACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGc                                            >  1:3166624/1‑93 (MQ=255)

                                             cACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGc                                            <  2:4639374/93‑1 (MQ=255)

                                               ccAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCAt                                          >  2:2287728/1‑93 (MQ=255)

                                                     cTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGcc                                    >  1:1663182/1‑93 (MQ=255)

                                                     cTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGcc                                    <  2:1716336/93‑1 (MQ=255)

                                                      tAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCa                                   >  2:426199/1‑93 (MQ=255)

                                                       aaCATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCaa                                  <  1:1311638/93‑1 (MQ=255)

                                                        aCATTAGGTAATTTTTTCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAg                                 >  2:2768099/1‑93 (MQ=255)

                                                        aCATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAg                                 >  2:2439548/1‑93 (MQ=255)

                                                        aCATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAg                                 >  1:1879294/1‑93 (MQ=255)

                                                         cATTAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGa                                >  2:386710/1‑93 (MQ=255)

                                                           ttAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAtt                              >  1:2560926/1‑93 (MQ=255)

                                                           ttAGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGAtt                              <  2:772444/93‑1 (MQ=255)

                                                             aGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTaa                            >  1:3295351/1‑93 (MQ=255)

                                                             aGGTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTaa                            <  1:897055/93‑1 (MQ=255)

                                                              ggTAATTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAg                           >  1:2999053/1‑93 (MQ=255)

                                                                  aTTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGcaca                       >  1:1300259/1‑93 (MQ=255)

                                                                  aTTTTTCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCa                       >  2:1423923/1‑93 (MQ=255)

                                                                   tttttCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCAt                      >  1:3379400/1‑93 (MQ=255)

                                                                    ttttCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATc                     <  1:2619268/93‑1 (MQ=255)

                                                                     tttCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCg                    <  2:1562619/93‑1 (MQ=255)

                                                                      ttCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCgg                   >  2:567087/1‑93 (MQ=255)

                                                                      ttCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCgg                   <  2:1203463/93‑1 (MQ=255)

                                                                       tCCCATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgt                  <  2:1677539/93‑1 (MQ=255)

                                                                         ccATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgtgt                <  2:855748/93‑1 (MQ=255)

                                                                         ccATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgtgt                <  1:326098/93‑1 (MQ=255)

                                                                         ccATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgtgt                <  1:3840434/93‑1 (MQ=255)

                                                                         ccATCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGgtgt                >  2:3954711/1‑93 (MQ=255)

                                                                           aTCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTa              >  2:192880/1‑93 (MQ=255)

                                                                           aTCGCGAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTa              <  1:4493395/93‑1 (MQ=255)

                                                                            acgcgAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGttta             <  2:2446863/92‑3 (MQ=255)

                                                                             cgcgAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAAt            <  1:3108275/93‑1 (MQ=255)

                                                                             cgcgAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAAt            <  2:1525981/93‑1 (MQ=255)

                                                                             cgcgAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAAt            <  2:1380208/93‑1 (MQ=255)

                                                                             cgcgAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAAt            >  1:451398/1‑93 (MQ=255)

                                                                               cgAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGc          <  1:4603097/93‑1 (MQ=255)

                                                                                gAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCt         <  2:898614/93‑1 (MQ=255)

                                                                                gAAAAAAAATGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCt         >  2:3916025/1‑93 (MQ=255)

                                                                                 aaaaaaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTg        >  2:1853139/1‑93 (MQ=255)

                                                                                  aaaaaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGa       >  2:4386965/1‑93 (MQ=255)

                                                                                  aaaaaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGa       >  1:287707/1‑93 (MQ=255)

                                                                                  aaaaaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGa       >  1:1554629/1‑93 (MQ=255)

                                                                                   aaaaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGaa      >  2:1264007/1‑93 (MQ=255)

                                                                                   aaaaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGaa      >  1:1910696/1‑93 (MQ=255)

                                                                                    aaaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGaaa     >  2:3187890/1‑93 (MQ=255)

                                                                                     aaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAt    >  2:1812057/1‑93 (MQ=255)

                                                                                     aaaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAt    >  2:2153962/1‑93 (MQ=255)

                                                                                      aaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAtg   >  1:3868792/1‑93 (MQ=255)

                                                                                      aaaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAtg   >  2:3466391/1‑93 (MQ=255)

                                                                                       aaatgAAAAAAATTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAtg   <  1:3766963/89‑1 (MQ=255)

                                                                                       aaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAtgt  <  2:4040028/93‑1 (MQ=255)

                                                                                       aaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAtgt  <  1:2393744/93‑1 (MQ=255)

                                                                                       aaTGG‑AAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAtgt  <  2:617241/93‑1 (MQ=255)

                                                                                       aaTGG‑AAAAAAGTTCGGTCAGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAAtgt  >  2:4585138/1‑93 (MQ=255)

CAGCTTACCTAACCCTAAGGCGATCACCAGCGCACTGCCAACCATCACCAGTGCTAACATTAGGTAATTTTTCCCATCGCGAAAAAAAATGGAAAAAAAGTTCGGTCCGGCTTCGACCCCGACGCAGAAAATAAACAGCATAAAGCCAAGATTAAGCGCATCGGTGTTAATGCTGAAATGT  >  NC_000913/888704‑888884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`