Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,620,798	Δ1 bp	intergenic (+255/+186)	ydeF → / ← ydeH	putative transport protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,620,795	0	C	.	100.0%	374.3 / NA	83	intergenic (+252/+189)	ydeF/ydeH	putative transport protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (49/34);  total (49/34)

CTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAT  >  NC_000913/1620703‑1620883                                                                                             |                                                                                         cTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGc                                                                                          <  1:1570487/93‑1 (MQ=255) cTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGc                                                                                          >  1:2088464/1‑93 (MQ=255) cTGGGAATAATTTTATTTTCTGGTTTGCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGc                                                                                          <  2:4295938/93‑1 (MQ=255)  tGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcc                                                                                         >  2:3434018/1‑93 (MQ=255)   gggAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGccc                                                                                        <  2:2392764/93‑1 (MQ=255)      aataatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCttt                                                                                     >  2:3762109/1‑93 (MQ=255)       ataatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGcccttgt                                                                                    >  2:4443232/1‑89 (MQ=255)        taatTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGtt                                                                                  >  2:2286186/1‑93 (MQ=255)           ttttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACa                                                                               <  2:112454/93‑1 (MQ=255)           ttttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACa                                                                               <  2:2224376/93‑1 (MQ=255)            tttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCGTGTTACAg                                                                              >  2:4415837/1‑93 (MQ=255)             ttattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGt                                                                             <  2:3866435/93‑1 (MQ=255)               attttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTtg                                                                           <  1:1099743/93‑1 (MQ=255)                ttttctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTtgt                                                                          >  1:1352449/1‑93 (MQ=255)                ttttctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTtgt                                                                          >  1:1064898/1‑93 (MQ=255)                   tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       >  1:1546998/1‑93 (MQ=255)                   tctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTa                                                                       >  1:636905/1‑93 (MQ=255)                    ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTAc                                                                      >  2:3765836/1‑93 (MQ=255)                    ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTAc                                                                      <  2:3709260/93‑1 (MQ=255)                    ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTAc                                                                      <  2:678818/93‑1 (MQ=255)                    ctggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTAc                                                                      <  1:4266153/93‑1 (MQ=255)                     tggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACa                                                                     >  2:3164162/1‑93 (MQ=255)                     tggttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACa                                                                     >  1:1335613/1‑93 (MQ=255)                     tggttttctggCCGCGCATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACa                                                                     >  1:764300/1‑93 (MQ=255)                       gttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAg                                                                   >  1:630953/1‑93 (MQ=255)                        ttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgg                                                                  >  2:1219594/1‑93 (MQ=255)                        ttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgg                                                                  <  1:355034/93‑1 (MQ=255)                        ttttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAgg                                                                  >  1:907376/1‑93 (MQ=255)                         tttctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAggg                                                                 <  2:2358880/93‑1 (MQ=255)                           tctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGc                                                               <  2:36375/93‑1 (MQ=255)                           tctggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGc                                                               >  1:2824144/1‑93 (MQ=255)                             tggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCt                                                             >  2:1387459/1‑93 (MQ=255)                             tggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCt                                                             >  1:457361/1‑93 (MQ=255)                              ggCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTg                                                            >  1:2713002/1‑93 (MQ=255)                               gCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGa                                                           <  1:283457/93‑1 (MQ=255)                               gCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGa                                                           >  2:4098353/1‑93 (MQ=255)                                ccGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAt                                                          >  1:4404113/1‑93 (MQ=255)                                ccGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAt                                                          <  1:2832948/93‑1 (MQ=255)                                ccGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAt                                                          <  1:4655841/93‑1 (MQ=255)                                  gcgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTCACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAttt                                                        >  1:1443110/1‑93 (MQ=255)                                  gcgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAttt                                                        >  1:3838730/1‑93 (MQ=255)                                   cgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAtttt                                                       <  1:4207156/93‑1 (MQ=255)                                   cgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAtttt                                                       <  1:447648/93‑1 (MQ=255)                                   cgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAtttt                                                       >  2:473653/1‑93 (MQ=255)                                   cgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAtttt                                                       <  1:3896434/93‑1 (MQ=255)                                   cgTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAtttt                                                       >  2:915481/1‑93 (MQ=255)                                    gTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAttttt                                                      >  1:3414559/1‑93 (MQ=255)                                    gTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGAttttt                                                      >  2:794425/1‑93 (MQ=255)                                     tATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTa                                                     <  1:1395025/93‑1 (MQ=255)                                     tATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTa                                                     >  2:1985488/1‑93 (MQ=255)                                     tATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTa                                                     <  2:1301355/93‑1 (MQ=255)                                      aTTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTAt                                                    <  1:1898490/93‑1 (MQ=255)                                          cAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACg                                                >  1:3092534/1‑93 (MQ=255)                                            gCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGc                                              >  1:4368429/1‑93 (MQ=255)                                            gCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGc                                              >  2:3149013/1‑93 (MQ=255)                                            gCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGc                                              <  2:2108240/93‑1 (MQ=255)                                              cacaAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGa                                            >  2:3427232/1‑93 (MQ=255)                                                 aaaTGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaa                                         <  1:2574199/93‑1 (MQ=255)                                                     gggATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaaaaa                                     <  2:928088/93‑1 (MQ=255)                                                     gggATGACTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGaaaaaaaa                                     <  2:729545/93‑1 (MQ=255)                                                           aCTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCa                               >  1:1812720/1‑93 (MQ=255)                                                            cTAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAg                              >  1:3683045/1‑93 (MQ=255)                                                             tAATGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGt                             >  2:919996/1‑93 (MQ=255)                                                              aaTGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTa                            >  1:4558816/1‑93 (MQ=255)                                                              aaTGAACGGAGATAACCCCTCACCAAACCGG‑CCCTTGTCACAGTTGCGACCAAGGGACCTGATTTTTATGACGGCGAAAACAAACCGCCAGTa                            <  2:1588814/93‑1 (MQ=255)                                                                tGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACCGCTGCGGACAAGGGGCCTGATTTTTATGACCGCGAAAAAAAACCGCCAGTaaa                          >  2:3655685/1‑93 (MQ=255)                                                                tGAACGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTaaa                          >  1:2783962/1‑93 (MQ=255)                                                                 gAACGGAGATAACCCCTCACCTAACCGG‑CCCTTATTACAGTTGCGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAAc                         <  1:4650148/93‑1 (MQ=255)                                                                  accGGATATAATCCCTCACCTACCCGG‑CCCTTTTTACAGTTGTGTACAAGGGCCCTGATTTTTATGACGCCGAAAAAAAACCGCCAGTAAAcc                        <  2:221576/91‑1 (MQ=255)                                                                    gggAGATAATCCCTCACCTAACCGG‑CCGTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcgg                      <  2:1285902/92‑1 (MQ=255)                                                                    cGGAGATAATCCCTCCCCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcgg                      <  1:3363394/93‑1 (MQ=255)                                                                    cGGAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcgg                      <  1:786212/93‑1 (MQ=255)                                                                     ggAGATAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcggc                     >  2:4468234/1‑93 (MQ=255)                                                                      gagaTAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcggcg                    >  1:2901720/1‑93 (MQ=255)                                                                       agaTAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACcggcgg                   >  1:2233881/1‑93 (MQ=255)                                                                         aTAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTg                 <  2:4300590/93‑1 (MQ=255)                                                                         aTAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTg                 >  1:3747846/1‑93 (MQ=255)                                                                          tAATCCCTCCCCT‑ACCCGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGCCGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGa                <  2:912088/93‑1 (MQ=255)                                                                          tAATCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGa                >  2:2724503/1‑93 (MQ=255)                                                                           aaTCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGaa               <  1:219687/93‑1 (MQ=255)                                                                            aTCCCTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAAt              >  2:1982300/1‑93 (MQ=255)                                                                              cccTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGc            <  1:1954106/93‑1 (MQ=255)                                                                              cccTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGc            <  2:1263697/93‑1 (MQ=255)                                                                                cTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCtt          >  2:152404/1‑93 (MQ=255)                                                                                cTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCtt          <  1:2791200/93‑1 (MQ=255)                                                                                cTCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCtt          <  1:2859754/93‑1 (MQ=255)                                                                                 tCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTg         >  1:1968860/1‑93 (MQ=255)                                                                                 tCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTg         >  2:2963624/1‑93 (MQ=255)                                                                                 tCACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCCGCGGCGAATGCTTg         >  1:912717/1‑93 (MQ=255)                                                                                  cACCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGc        >  2:94240/1‑93 (MQ=255)                                                                                   aCCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       <  2:4331153/93‑1 (MQ=255)                                                                                   aCCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       >  1:2741950/1‑93 (MQ=255)                                                                                   aCCTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCa       >  1:3820607/1‑93 (MQ=255)                                                                                    ccTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCAt      >  2:982096/1‑93 (MQ=255)                                                                                     cTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATg     >  1:157962/1‑93 (MQ=255)                                                                                     cTAACCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATg     <  1:2305209/93‑1 (MQ=255)                                                                                        aCCGG‑CCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTAATGACGTCAAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAt  <  1:2570206/93‑1 (MQ=255)                                                                                             |                                                                                         CTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGAT  >  NC_000913/1620703‑1620883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑