Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,680,496	(C)5→4	coding (323/729 nt)	rstA →	response transcriptional regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,680,492	0	C	.	100.0%	371.2 / NA	82	coding (319/729 nt)	rstA	response transcriptional regulatory protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (50/32);  total (50/32)

GACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTC  >  NC_000913/1680400‑1680579                                                                                             |                                                                                        gACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGc                                                                                         <  1:4548786/93‑1 (MQ=255) gACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGc                                                                                         <  1:2681370/93‑1 (MQ=255) gACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGc                                                                                         >  2:3855609/1‑93 (MQ=255)  aCCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcc                                                                                        >  2:3770632/1‑93 (MQ=255)   ccGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGccc                                                                                       >  2:1242497/1‑93 (MQ=255)   ccGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGccc                                                                                       <  2:4460463/93‑1 (MQ=255)    cGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccc                                                                                      <  2:2609178/93‑1 (MQ=255)    cGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccc                                                                                      <  2:3950379/93‑1 (MQ=255)     gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccct                                                                                     <  2:4412511/93‑2 (MQ=255)     gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccct                                                                                     <  2:1952069/93‑2 (MQ=255)      aTTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctg                                                                                    >  1:2182091/1‑91 (MQ=255)      aTTGTTCTTCTAACCTCTCTCGAAAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctg                                                                                    <  1:691112/93‑3 (MQ=255)       ttGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctgc                                                                                   >  2:3174006/1‑90 (MQ=255)       ttGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctgc                                                                                   >  2:1216069/1‑90 (MQ=255)           tcttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGtt                                                                              <  1:1964339/93‑1 (MQ=255)           tcttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGtt                                                                              >  2:3213591/1‑93 (MQ=255)             ttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGtttt                                                                            <  1:327766/93‑1 (MQ=255)                tAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCt                                                                         >  2:1827472/1‑93 (MQ=255)                   ccTCTCTCGATAGCGATATGATCCATATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGGCG‑CCCCTGCTGTTTTGCTAgc                                                                      <  1:1902237/93‑1 (MQ=255)                   ccTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgc                                                                      >  2:3471933/1‑93 (MQ=255)                    ctctctCGATAGCGATATCAACCACATCCTGGCACTGGAAATGGGGGTCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgcg                                                                     >  1:640565/1‑93 (MQ=255)                     tctctcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgcgc                                                                    <  2:1730395/93‑1 (MQ=255)                       tctcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGt                                                                  >  1:2447004/1‑93 (MQ=255)                        ctcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGtt                                                                 <  2:4340150/93‑1 (MQ=255)                         tcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGttt                                                                <  2:1800544/93‑1 (MQ=255)                         tcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGttt                                                                >  1:4586924/1‑93 (MQ=255)                         tcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGttt                                                                >  2:95056/1‑93 (MQ=255)                          cGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTa                                                               <  2:2564245/93‑1 (MQ=255)                          cGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTa                                                               <  2:2093569/93‑1 (MQ=255)                          cGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTa                                                               <  1:4597318/93‑1 (MQ=255)                              aGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                           <  2:1620329/93‑1 (MQ=255)                              aGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                           <  2:345511/93‑1 (MQ=255)                              aGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                           <  1:597339/93‑1 (MQ=255)                               gCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGttt                                                          >  1:753037/1‑93 (MQ=255)                               gCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGttt                                                          >  1:1614292/1‑93 (MQ=255)                               gCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGttt                                                          >  2:3169852/1‑93 (MQ=255)                                 gATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGc                                                        <  2:2248868/93‑1 (MQ=255)                                  atatGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCa                                                       >  1:154927/1‑93 (MQ=255)                                   tatGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAt                                                      >  1:2760226/1‑93 (MQ=255)                                    atGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAtt                                                     >  2:579631/1‑93 (MQ=255)                                     tGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAttt                                                    <  2:774864/93‑1 (MQ=255)                                      gAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTg                                                   <  2:1868409/93‑1 (MQ=255)                                        aCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCg                                                 >  1:581768/1‑93 (MQ=255)                                        aCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCg                                                 >  2:2041112/1‑93 (MQ=255)                                        aCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCg                                                 >  2:3002647/1‑93 (MQ=255)                                        aCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTCCATTTGCg                                                 >  1:416995/1‑93 (MQ=255)                                         ccACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGt                                                >  1:3365456/1‑93 (MQ=255)                                          cacaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTc                                               <  1:249275/93‑1 (MQ=255)                                           acaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCa                                              >  1:3918887/1‑93 (MQ=255)                                           acaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCa                                              >  2:1507032/1‑93 (MQ=255)                                             aTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGa                                            >  2:2029650/1‑93 (MQ=255)                                             aTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGa                                            <  1:1204029/93‑1 (MQ=255)                                              tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                           >  2:4148636/1‑93 (MQ=255)                                              tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                           >  1:1883227/1‑93 (MQ=255)                                              tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                           <  2:1986083/93‑1 (MQ=255)                                                cTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATg                                         <  1:927744/93‑1 (MQ=255)                                                cTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGCTTACGTTTGCATTTGCGTCAGACTg                                         >  2:831580/1‑93 (MQ=255)                                                cTGGCACTGGAAATGAGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATg                                         >  1:4486777/1‑93 (MQ=255)                                                  ggCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAg                                       <  2:2394003/93‑1 (MQ=255)                                                     aCTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCaa                                    <  1:346777/93‑1 (MQ=255)                                                     aCTGGAAATGGGAGCATGCGACTATATTCTCAGAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGGTTGCATTTGCGTTTGAATGATCag                                    >  2:883939/1‑92 (MQ=255)                                                      cTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAg                                   >  2:4412460/1‑93 (MQ=255)                                                       tGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGc                                  <  1:2609244/93‑1 (MQ=255)                                                          aaaTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcac                               <  2:1867746/93‑1 (MQ=255)                                                          aaaTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcac                               >  2:3881737/1‑93 (MQ=255)                                                           aaTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcaca                              <  2:2795811/93‑1 (MQ=255)                                                           aaTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcaca                              <  2:1658482/93‑1 (MQ=255)                                                            aTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCacac                             <  2:3584230/93‑1 (MQ=255)                                                               ggTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGa                          >  2:1401535/1‑93 (MQ=255)                                                               ggTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGa                          >  2:4113546/1‑93 (MQ=255)                                                                gTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGAc                         <  2:3174529/93‑1 (MQ=255)                                                                 tGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGAcc                        >  2:3221209/1‑93 (MQ=255)                                                                   ccTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaa                      >  2:1385583/1‑93 (MQ=255)                                                                    cTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaaa                     >  2:1504373/1‑93 (MQ=255)                                                                    cTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaaa                     >  2:152667/1‑93 (MQ=255)                                                                    cTGCGACTATATTCTCAAAACGACG‑CCCCTGCCGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCCAGCCACACTGACCaca                     >  1:3336934/1‑91 (MQ=255)                                                                     tGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAg                    <  1:2914914/93‑1 (MQ=255)                                                                     tGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAg                    >  2:4507395/1‑93 (MQ=255)                                                                        gACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTc                 >  2:4494102/1‑93 (MQ=255)                                                                         aCTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCt                >  1:3191443/1‑93 (MQ=255)                                                                          cTATATTCTCAAACCGACGCCCCCTGCTGTTTTGCTACCGCGTTTACGTTTGCATTTGCGTCAGAATGACCAAGCCACACTGACCAAAGGTCt                <  2:661075/93‑1 (MQ=255)                                                                          cTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCtt               >  1:3695080/1‑93 (MQ=255)                                                                           tataTTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTc              >  2:1820274/1‑93 (MQ=255)                                                                            atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa             <  2:615567/93‑1 (MQ=255)                                                                            atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa             <  1:247707/93‑1 (MQ=255)                                                                            atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa             >  2:1694890/1‑93 (MQ=255)                                                                             tatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAg            >  1:2411606/1‑93 (MQ=255)                                                                              atTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAgg           >  1:1390360/1‑93 (MQ=255)                                                                               ttCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGa          <  1:1677036/93‑1 (MQ=255)                                                                               ttCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGa          >  1:166576/1‑93 (MQ=255)                                                                               ttCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGa          >  2:2404451/1‑93 (MQ=255)                                                                               ttCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGa          >  1:1090061/1‑93 (MQ=255)                                                                                 ctcAAAGCGACG‑CGCCTGCTGTTTTGCTAGCGCGTTTGCGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGaaa        <  1:2356772/93‑1 (MQ=255)                                                                                  tcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAAc       >  2:3741328/1‑93 (MQ=255)                                                                                    aaaaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGt     >  2:3584367/1‑93 (MQ=255)                                                                                     aaaCGTCG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtc    <  2:417916/93‑1 (MQ=255)                                                                                      aaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtct   >  1:121822/1‑93 (MQ=255)                                                                                      aaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtct   <  1:802614/93‑1 (MQ=255)                                                                                       acgacg‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtctc  >  1:2346613/1‑93 (MQ=255)                                                                                             |                                                                                        GACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTC  >  NC_000913/1680400‑1680579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑