BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,483,335	(C)_6→5	coding (942/3594 nt)	evgS →	EvgS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,483,330	0	C	.	100.0%	589.0 / NA	129	coding (937/3594 nt)	evgS	EvgS
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (61/68); total (61/68)

Only 100 of 144 total aligned reads displayed.

TTTCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGCCCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTAAA  >  NC_000913/2483240‑2483418

tttCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGccc                                                                                        >  2:1138807/1‑93 (MQ=255)

  tCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGccccc                                                                                      <  1:3703222/93‑1 (MQ=255)

   cTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGccccct                                                                                     <  1:447261/93‑2 (MQ=255)

    tGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGcccccta                                                                                    <  1:3292892/93‑3 (MQ=255)

    tGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGcccccta                                                                                    >  1:3776121/1‑91 (MQ=255)

      aaCAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGccccctatt                                                                                  <  1:586373/93‑5 (MQ=255)

       aCAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTc                                                                                >  2:4475525/1‑93 (MQ=255)

          aaCCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTAt                                                                             >  1:1621331/1‑93 (MQ=255)

          aaCCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTAt                                                                             >  1:3989892/1‑93 (MQ=255)

          aaCCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTAt                                                                             <  2:4429643/93‑1 (MQ=255)

            ccATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGa                                                                           >  1:3133328/1‑93 (MQ=255)

            ccATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGa                                                                           >  1:2684758/1‑93 (MQ=255)

            ccATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGa                                                                           <  1:998557/93‑1 (MQ=255)

             cATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGAc                                                                          >  1:4243080/1‑93 (MQ=255)

              aTTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACg                                                                         >  1:514221/1‑93 (MQ=255)

               ttAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACgg                                                                        >  2:688415/1‑93 (MQ=255)

                tAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGa                                                                       <  1:3162615/93‑1 (MQ=255)

                tAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGa                                                                       <  2:3162479/93‑1 (MQ=255)

                  gAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATg                                                                     >  1:4044115/1‑93 (MQ=255)

                   aaCTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGa                                                                    >  1:3001746/1‑93 (MQ=255)

                     cTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGaaa                                                                  <  2:3601355/93‑1 (MQ=255)

                      tCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGaaaa                                                                 >  2:4089311/1‑93 (MQ=255)

                      tCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGaaaa                                                                 >  1:2512193/1‑93 (MQ=255)

                      tCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGaaaa                                                                 >  1:2512194/1‑93 (MQ=255)

                         cTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATgg                                                              >  1:1607207/1‑93 (MQ=255)

                          tGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGc                                                             <  1:3797082/93‑1 (MQ=255)

                          tGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGc                                                             <  2:1243493/93‑1 (MQ=255)

                          tGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGc                                                             <  1:1484506/93‑1 (MQ=255)

                           gAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCt                                                            >  2:2716807/1‑93 (MQ=255)

                            aaCATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTc                                                           <  1:84877/93‑1 (MQ=255)

                             aCATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCg                                                          >  1:1710594/1‑93 (MQ=255)

                               aTGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGACTCGGt                                                        >  2:4147108/1‑93 (MQ=255)

                                 gAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTc                                                      <  1:896100/93‑1 (MQ=255)

                                 gAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTc                                                      <  2:3453463/93‑1 (MQ=255)

                                   aaaaCAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCgg                                                    <  2:3160488/93‑1 (MQ=255)

                                    aaaCAGTGGATTAAGCAGCATCCCAATTTAAAGGTTCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCggg                                                   >  2:2850168/1‑93 (MQ=255)

                                    aaaCAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCggg                                                   >  2:1428284/1‑93 (MQ=255)

                                      aCAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGc                                                 <  2:2517893/93‑1 (MQ=255)

                                      aCAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGc                                                 >  1:1018761/1‑93 (MQ=255)

                                      aCAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCCGTTCGGGGc                                                 >  1:3028029/1‑93 (MQ=255)

                                         gTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACTGATGAAAATGGCTCGGTTCGGGGCGtt                                              >  1:3082703/1‑93 (MQ=255)

                                          tGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTa                                             <  2:2752224/93‑1 (MQ=255)

                                           ggATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTAt                                            <  2:3470336/93‑1 (MQ=255)

                                            gATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATg                                           <  1:945522/93‑1 (MQ=255)

                                            gATTAAGCAGCATCCCAATTTAAAGCTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATg                                           <  1:4359942/93‑1 (MQ=255)

                                             aTTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATgg                                          <  1:524605/93‑1 (MQ=255)

                                             aTTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATgg                                          >  2:3700681/1‑93 (MQ=255)

                                              ttAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATggg                                         <  2:2560322/93‑1 (MQ=255)

                                                  gcagcaTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGAc                                     <  2:3804309/93‑1 (MQ=255)

                                                    agcaTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACAt                                   <  1:1517028/93‑1 (MQ=255)

                                                    agcaTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACAt                                   <  1:3891500/93‑1 (MQ=255)

                                                     gcaTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACAtt                                  >  1:660637/1‑93 (MQ=255)

                                                     gcaTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACAtt                                  <  2:2891931/93‑1 (MQ=255)

                                                      caccccAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTc                                 <  2:1197978/90‑1 (MQ=255)

                                                      caTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTc                                 >  1:1567233/1‑93 (MQ=255)

                                                      caTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTc                                 >  1:341558/1‑93 (MQ=255)

                                                       aTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCt                                <  1:1158948/93‑1 (MQ=255)

                                                       aTCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCAGTTCGGGGGGTTATGGGGGACATTCt                                >  2:3299420/1‑93 (MQ=255)

                                                        tCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCtt                               <  2:3814001/93‑1 (MQ=255)

                                                        tCCCAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCtt                               >  1:1076533/1‑93 (MQ=255)

                                                          ccAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTaa                             >  2:321515/1‑93 (MQ=255)

                                                          ccAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTaa                             <  2:2376628/93‑1 (MQ=255)

                                                          ccAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGGTCGGGGCGTTATGGGGGGCATTCTTaa                             >  2:3362694/1‑93 (MQ=255)

                                                           cAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAat                            >  2:3731862/1‑93 (MQ=255)

                                                           cAATTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAat                            <  2:3388406/93‑1 (MQ=255)

                                                           cAATATAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAat                            <  1:3967368/93‑1 (MQ=255)

                                                            aaTTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAata                           <  2:786575/93‑1 (MQ=255)

                                                            aaTTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAata                           >  2:3967657/1‑93 (MQ=255)

                                                            aaTTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAata                           >  1:4074421/1‑93 (MQ=255)

                                                            aaTTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAata                           >  2:162424/1‑93 (MQ=255)

                                                             aTTTAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAatat                          >  2:354315/1‑93 (MQ=255)

                                                              tttAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAAtatt                         >  1:4347/1‑93 (MQ=255)

                                                                tAAAGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAAtattat                       <  1:467379/93‑1 (MQ=255)

                                                                  aaGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATAttatta                     <  1:1393903/93‑1 (MQ=255)

                                                                   aGGTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTAc                    >  1:143543/1‑93 (MQ=255)

                                                                    ggTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTAcc                   <  2:3575481/93‑1 (MQ=255)

                                                                    ggTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTAcc                   <  2:1082519/93‑1 (MQ=255)

                                                                    ggTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTAcc                   >  1:2389632/1‑93 (MQ=255)

                                                                     gTGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGGTATGGGGGATATTCTTAATATTATTACCt                  >  1:2316254/1‑93 (MQ=255)

                                                                      tGCTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCtt                 <  1:4575016/93‑1 (MQ=255)

                                                                        cTGGAAAATCNTTACTCG‑CCCCCTNTTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGc               <  2:1618442/93‑1 (MQ=255)

                                                                        cTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGc               <  1:2799217/93‑1 (MQ=255)

                                                                        cTGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGc               >  1:2139112/1‑93 (MQ=255)

                                                                         tGGAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCa              >  1:1944415/1‑93 (MQ=255)

                                                                           gAAAATCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCaaa            >  2:3883241/1‑93 (MQ=255)

                                                                            aaaaTCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAAc           >  2:3325680/1‑93 (MQ=255)

                                                                             aaaTCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACa          <  2:1158508/93‑1 (MQ=255)

                                                                              aaTCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAg         <  1:2166133/93‑1 (MQ=255)

                                                                               aTCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAgg        <  2:1739170/93‑1 (MQ=255)

                                                                                tCCTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGt       >  2:2149758/1‑93 (MQ=255)

                                                                                 ccTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGtt      <  2:3653097/93‑1 (MQ=255)

                                                                                 ccTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGtt      <  1:2700721/93‑1 (MQ=255)

                                                                                 ccTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGtt      <  2:3980602/93‑1 (MQ=255)

                                                                                  cTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGttt     >  1:1815765/1‑93 (MQ=255)

                                                                                  cTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGttt     >  1:1719898/1‑93 (MQ=255)

                                                                                  cTTACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGatt     >  1:3719824/1‑93 (MQ=255)

                                                                                   ttACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTa    >  1:2368342/1‑93 (MQ=255)

                                                                                   ttACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTa    >  2:1314168/1‑93 (MQ=255)

                                                                                    tACTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTaa   >  2:3640226/1‑93 (MQ=255)

                                                                                     aCTCG‑CCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTaaa  <  1:2764440/93‑1 (MQ=255)

TTTCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGCCCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTAAA  >  NC_000913/2483240‑2483418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`