BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,075,220	(T)_5→6	coding (256/357 nt)	yggP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,075,215	1	.	T	99.4%	648.5 / ‑4.4	177	coding (261/357 nt)	yggP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/0); new base T (84/92); total (85/92)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 202 total aligned reads displayed.

ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA  >  NC_000913/3075123‑3075302

 taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑t                                                                                          <  1:206328/93‑1 (MQ=255)

 taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑t                                                                                          >  2:2087635/1‑93 (MQ=255)

  aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tt                                                                                         <  2:1760992/93‑1 (MQ=255)

    gTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt                                                                                       >  1:3600087/1‑93 (MQ=255)

     tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttttt                                                                                      <  2:3954397/93‑1 (MQ=255)

     tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttttt                                                                                      <  2:1497060/93‑1 (MQ=255)

      ggCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttttt                                                                                     <  2:637672/93‑2 (MQ=255)

       gCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttttta                                                                                    >  1:886087/1‑91 (MQ=255)

       gCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttttta                                                                                    >  1:2216530/1‑91 (MQ=255)

       gCATCGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttttta                                                                                    >  2:1929216/1‑91 (MQ=255)

         aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttttttata                                                                                  >  1:4061552/1‑89 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGcc                                                                           >  1:974877/1‑93 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGcc                                                                           <  1:744987/93‑1 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGcc                                                                           >  2:427139/1‑93 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGcc                                                                           <  1:3401920/93‑1 (MQ=255)

               gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGcc                                                                           >  1:3017673/1‑93 (MQ=255)

                ccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCTATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCa                                                                          <  1:3041020/93‑1 (MQ=255)

                caaaaaTATTGTTAGCTGTAGCCCGCTGAATCCCCGCTTGGAACCCCCATCCCGGTTTGAAATACAAAACGCGGGCCTTTTTTAT‑‑ATTTGCCa                                                                          <  2:1257672/91‑1 (MQ=255)

                  aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGt                                                                        <  1:1933150/93‑1 (MQ=255)

                  aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGt                                                                        >  2:2061597/1‑93 (MQ=255)

                  aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGt                                                                        <  2:4446828/93‑1 (MQ=255)

                       atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGAt                                                                   >  2:3471778/1‑93 (MQ=255)

                        ttCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGAtt                                                                  >  2:3887135/1‑93 (MQ=255)

                        ttCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGAtt                                                                  <  1:621022/93‑1 (MQ=255)

                          cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGAtttt                                                                >  1:2141115/1‑93 (MQ=255)

                           gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGAttttt                                                               >  1:1001595/1‑93 (MQ=255)

                           gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGAttttt                                                               >  2:791547/1‑93 (MQ=255)

                           gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGAttttt                                                               >  1:3481291/1‑93 (MQ=255)

                            tAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCTTCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTa                                                              >  2:3586535/1‑93 (MQ=255)

                            tAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTa                                                              >  2:4208731/1‑93 (MQ=255)

                              gCTGTAGCCCGCTGAATATCCGCTTAGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTAcc                                                            <  1:178737/93‑1 (MQ=255)

                               cTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTAccc                                                           >  2:2985088/1‑93 (MQ=255)

                                tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCa                                                          <  2:2395953/93‑1 (MQ=255)

                                  tAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACt                                                        <  1:2638272/93‑1 (MQ=255)

                                    gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTc                                                      <  2:4170776/93‑1 (MQ=255)

                                    gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTc                                                      <  1:4584866/93‑1 (MQ=255)

                                     gccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCg                                                     <  2:1780907/92‑1 (MQ=255)

                                     cccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCg                                                     >  1:4405897/1‑93 (MQ=255)

                                      ccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGa                                                    <  2:2579862/93‑1 (MQ=255)

                                       cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                   >  2:4110252/1‑93 (MQ=255)

                                       cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                   >  1:1709043/1‑93 (MQ=255)

                                        gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACa                                                  >  2:2683478/1‑93 (MQ=255)

                                         cTGAATATCCGCTTGTTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACaa                                                 <  2:1088975/93‑1 (MQ=255)

                                          tGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAAt                                                <  1:4101159/93‑1 (MQ=255)

                                            aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                              <  1:4547280/93‑1 (MQ=255)

                                             atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAc                                             <  2:3375850/93‑1 (MQ=255)

                                             atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAc                                             <  1:1870269/93‑1 (MQ=255)

                                             atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAc                                             <  2:1662326/93‑1 (MQ=255)

                                              tatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcc                                            <  1:3608277/93‑1 (MQ=255)

                                               atCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAccc                                           >  1:4509109/1‑93 (MQ=255)

                                               atCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAccc                                           <  2:1451144/93‑1 (MQ=255)

                                                  cGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCgg                                        <  2:3820239/93‑1 (MQ=255)

                                                   gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc                                       <  1:1391687/93‑1 (MQ=255)

                                                     ttGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACACCGGcac                                     >  2:1354930/1‑93 (MQ=255)

                                                        gTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAtt                                  <  1:3308353/93‑1 (MQ=255)

                                                        gTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAtt                                  <  1:2581091/93‑1 (MQ=255)

                                                        gTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAtt                                  <  1:506450/93‑1 (MQ=255)

                                                          aaCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                <  2:1996703/93‑1 (MQ=255)

                                                          aaCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                <  2:1631054/93‑1 (MQ=255)

                                                           aCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                               >  2:3537667/1‑93 (MQ=255)

                                                            ccccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATg                              >  1:3930073/1‑93 (MQ=255)

                                                              ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            >  1:1635944/1‑93 (MQ=255)

                                                              ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            >  2:217407/1‑93 (MQ=255)

                                                              ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc                            >  2:250724/1‑93 (MQ=255)

                                                               cATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc                           >  1:1539134/1‑93 (MQ=255)

                                                               cATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTTTTAATTTCCCGGTGAGTTTTTTA‑CCACCTCCACAATTACCCCCGCACCATCATGccc                           >  1:1053047/1‑93 (MQ=255)

                                                                aTCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                          >  1:1277775/1‑93 (MQ=255)

                                                                aTCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg                          >  2:540709/1‑93 (MQ=255)

                                                                  cGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGt                        <  1:844090/93‑1 (MQ=255)

                                                                  cGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGt                        <  1:135277/93‑1 (MQ=255)

                                                                  cGCCGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGt                        <  1:4371595/93‑1 (MQ=255)

                                                                     cGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt                     >  2:3630023/1‑93 (MQ=255)

                                                                     cGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt                     >  1:415498/1‑93 (MQ=255)

                                                                     cGGTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTCACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt                     <  1:2513799/93‑1 (MQ=255)

                                                                      ggTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATg                    >  2:2969238/1‑93 (MQ=255)

                                                                      cgTTGCGATACAAAACGCTGGCCTTTTTTAT‑‑GTTTGCCAGTGCGATTTTTACCCACTTCGACAATATCCCCGGCACATTCATGCCCGGTAATg                    <  2:4684760/92‑1 (MQ=255)

                                                                       gTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                   >  2:2906/1‑93 (MQ=255)

                                                                       gTTGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                   <  1:1222641/93‑1 (MQ=255)

                                                                       gTTGAAATACAAACCGCTGGCCTTTTTTAT‑‑ATTTGCAAGTAAGTTTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                   <  2:2265050/93‑1 (MQ=255)

                                                                        ttGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAGCCCCGGCACATTCATGCCCGGTAATGAc                  <  1:1443839/93‑1 (MQ=255)

                                                                        ttGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                  >  1:3415897/1‑93 (MQ=255)

                                                                        ttGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                  >  1:109639/1‑93 (MQ=255)

                                                                         tGCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                 <  1:3497539/93‑1 (MQ=255)

                                                                          gCAATACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCg                >  1:71258/1‑93 (MQ=255)

                                                                            aaTACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga              <  2:2351015/93‑1 (MQ=255)

                                                                            aaTACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTCCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga              >  1:998897/1‑93 (MQ=255)

                                                                             aTACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATACCCCCGGCACATTCATGCCCGGTAATGACCGgat             <  1:2725531/93‑1 (MQ=255)

                                                                             aTACAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat             >  1:780159/1‑93 (MQ=255)

                                                                               aCAAAACGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatga           >  1:4322848/1‑93 (MQ=255)

                                                                                 aaaaCGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt         >  1:3747508/1‑93 (MQ=255)

                                                                                 aaaaCGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt         >  1:1454761/1‑93 (MQ=255)

                                                                                  aaaCGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAttt        <  2:1566345/93‑1 (MQ=255)

                                                                                   aaCGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATTAtttt       >  2:3202468/1‑93 (MQ=255)

                                                                                   aaCGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtttt       >  1:2670727/1‑93 (MQ=255)

                                                                                    aCGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAGCCCCGGCACATTCATGCCCGGTAATGTCCGGATGATTTTc      <  2:2299396/93‑1 (MQ=255)

                                                                                     cGCTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCt     >  2:2779623/1‑93 (MQ=255)

                                                                                       cTGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaa   <  2:1535512/93‑1 (MQ=255)

                                                                                        tGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa  <  2:4067059/93‑1 (MQ=255)

                                                                                        tGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa  >  1:2793667/1‑93 (MQ=255)

                                                                                        tGGCCTTTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa  >  1:4639067/1‑93 (MQ=255)

ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTAT‑‑ATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA  >  NC_000913/3075123‑3075302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`