BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,236,735	+C	coding (514/966 nt)	ygjT →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,236,734	1	.	C	100.0%	650.6 / NA	208	K171N (AAG→AAC)	ygjT	putative transport protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (91/117); total (91/117)

Only 100 of 230 total aligned reads displayed.

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

gACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg                                                                                           >  1:2450807/1‑93 (MQ=255)

gACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg                                                                                           >  2:4572928/1‑93 (MQ=255)

  cTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑cc                                                                                        >  1:1656098/1‑92 (MQ=255)

  cTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑cc                                                                                        <  2:3514379/93‑2 (MQ=255)

       tCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGGTGGCGCTCGTCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTgg                                                                                    >  2:4496694/1‑93 (MQ=255)

       tCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGAGGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTgg                                                                                    <  2:2622498/93‑1 (MQ=255)

        ccTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGt                                                                                   <  2:4140870/93‑1 (MQ=255)

         cTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTgggg                                                                                  >  1:1155127/1‑91 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 >  2:2686968/1‑93 (MQ=255)

                tCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGc                                                                           <  1:4572013/93‑1 (MQ=255)

                tCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGc                                                                           <  2:621964/93‑1 (MQ=255)

                  ttCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTa                                                                         >  2:301594/1‑93 (MQ=255)

                   tCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAc                                                                        <  2:1470464/93‑1 (MQ=255)

                   tCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAc                                                                        >  1:1021142/1‑93 (MQ=255)

                     ggTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcgc                                                                      <  2:121779/93‑1 (MQ=255)

                     ggTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcgc                                                                      <  1:55095/93‑1 (MQ=255)

                      gTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcgcg                                                                     >  2:2071450/1‑93 (MQ=255)

                       tGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCgg                                                                    >  2:19848/1‑93 (MQ=255)

                        gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGCAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt                                                                   <  1:2686697/93‑1 (MQ=255)

                        gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt                                                                   >  1:4285005/1‑93 (MQ=255)

                        gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt                                                                   >  2:2934168/1‑93 (MQ=255)

                        gCCTTCCTGCTGTTTACCGGCGGGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCACTGGCGACAAGCCGCTGGTGCGGTGGCTGAGCggc                                                                   >  2:1736300/1‑92 (MQ=255)

                         ccTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtc                                                                  >  1:3177509/1‑92 (MQ=255)

                         ccTTCCGGCTGTGTGCCGGCGAGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGAAAAGCCGCTGGTGCGCTGGCGACGCGGtc                                                                  <  2:3217945/93‑2 (MQ=255)

                           ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                >  1:1123798/1‑90 (MQ=255)

                           ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                >  1:312899/1‑90 (MQ=255)

                           ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                >  1:3694006/1‑90 (MQ=255)

                            tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcatt                                                               <  1:3961482/93‑5 (MQ=255)

                            tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcatt                                                               <  1:2972923/93‑5 (MQ=255)

                               tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgc                                                           <  1:2062016/93‑1 (MQ=255)

                               tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgc                                                           <  2:3250044/93‑1 (MQ=255)

                                gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg                                                          >  2:2866437/1‑93 (MQ=255)

                                gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg                                                          >  2:2227567/1‑93 (MQ=255)

                                gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg                                                          >  1:1463104/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        >  2:157837/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        >  2:3788120/1‑93 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       <  2:856963/93‑1 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       >  2:3433504/1‑93 (MQ=255)

                                     ttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGa                                                     <  1:3325937/93‑1 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    >  2:644026/1‑93 (MQ=255)

                                       aCCGGCGTGAAGAGGGCGCTCGCCAATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAcc                                                   <  1:1696169/93‑1 (MQ=255)

                                        ccGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCg                                                  >  1:745084/1‑93 (MQ=255)

                                          ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac                                                >  2:2592877/1‑93 (MQ=255)

                                           gCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGaca                                               >  1:308984/1‑93 (MQ=255)

                                            cGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGacac                                              >  1:1871240/1‑93 (MQ=255)

                                             gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                             <  1:456371/93‑1 (MQ=255)

                                             gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                             <  1:3204744/93‑1 (MQ=255)

                                             gTGAAGATGGCGCGCGCCCATGAAGATGATTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                             <  1:1359950/93‑1 (MQ=255)

                                              tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCa                                            <  2:904848/93‑1 (MQ=255)

                                                aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc                                          <  1:2599812/93‑1 (MQ=255)

                                                aaGAGGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc                                          <  1:2275319/93‑1 (MQ=255)

                                                aaGAGGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc                                          <  2:1396306/93‑1 (MQ=255)

                                                 aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg                                         <  2:4051976/93‑1 (MQ=255)

                                                    tGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACa                                      <  1:891924/93‑1 (MQ=255)

                                                    tGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACa                                      >  2:1333883/1‑93 (MQ=255)

                                                     ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                     <  2:2774257/93‑1 (MQ=255)

                                                     ggCGCTCGCCCATGAAGATGAATCAGGCAGTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                     <  1:2322926/93‑1 (MQ=255)

                                                      gcgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc                                    <  1:1298670/93‑1 (MQ=255)

                                                        gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa                                  <  1:921528/93‑1 (MQ=255)

                                                        gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa                                  >  2:3161648/1‑93 (MQ=255)

                                                        gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa                                  <  1:3494323/93‑1 (MQ=255)

                                                        gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa                                  >  1:4536427/1‑93 (MQ=255)

                                                        gcTCGCCCATGAAGATAACTCAGGCTTTGGCGAAAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa                                  <  2:3209914/93‑1 (MQ=255)

                                                           ggcacATGAAGATGAATCAGGCATTGGCGAAAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa                               <  2:4001081/89‑1 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGGGCAtt                             >  2:4426917/1‑93 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             >  2:887885/1‑93 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             <  1:4634601/93‑1 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           >  1:1394003/1‑93 (MQ=255)

                                                                aTGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGTGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt                          <  1:2535701/93‑1 (MQ=255)

                                                                 tGAAGATGAATCAGGCGTTGGCGAAAAGCCGCTGGTGCGCTGGCTACGCGG‑GCATTTGCGCATGACCGACGGCATCGACAACGAGCATTTCtt                         <  2:572435/93‑1 (MQ=255)

                                                                 tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         >  1:3073739/1‑93 (MQ=255)

                                                                 tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         >  1:2836665/1‑93 (MQ=255)

                                                                 tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         >  1:4322517/1‑93 (MQ=255)

                                                                 tGAAGATGAATAAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         >  2:3741728/1‑93 (MQ=255)

                                                                  gAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                        >  1:4151623/1‑93 (MQ=255)

                                                                    aGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                      >  1:3462020/1‑93 (MQ=255)

                                                                    aGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                      >  1:2432797/1‑93 (MQ=255)

                                                                     gATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                     >  1:872180/1‑93 (MQ=255)

                                                                        gAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACAGCCACCATCGACAACGAGCATTTCTTTGTGCGt                  >  1:2983476/1‑93 (MQ=255)

                                                                         aaTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTACTTTGTGCGTa                 <  2:2919413/93‑1 (MQ=255)

                                                                          aTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTaa                <  2:3605044/93‑1 (MQ=255)

                                                                           tCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg               >  2:1442749/1‑93 (MQ=255)

                                                                            cAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa              >  2:3376657/1‑93 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             <  2:1021142/93‑1 (MQ=255)

                                                                              ggCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt            <  2:3815982/93‑1 (MQ=255)

                                                                              ggCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt            <  1:2755596/93‑1 (MQ=255)

                                                                              ggCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt            <  1:3595221/93‑1 (MQ=255)

                                                                               gCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg           <  2:3332106/93‑1 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  2:4319231/1‑93 (MQ=255)

                                                                                   tGGCTACAAGCCGCTGTTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt       <  2:1944955/93‑1 (MQ=255)

                                                                                   tGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt       <  1:652065/93‑1 (MQ=255)

                                                                                   tGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt       <  2:2411371/93‑1 (MQ=255)

                                                                                   tGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt       <  1:209041/93‑1 (MQ=255)

                                                                                    ggCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTg      <  1:2398628/93‑1 (MQ=255)

                                                                                     gCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc     >  2:3525991/1‑93 (MQ=255)

                                                                                     gCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc     <  2:1593322/93‑1 (MQ=255)

                                                                                     gCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc     >  2:4452870/1‑93 (MQ=255)

                                                                                      cGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCt    <  1:571587/93‑1 (MQ=255)

                                                                                       gACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTg   >  1:4402912/1‑93 (MQ=255)

                                                                                        aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt  >  1:3813650/1‑93 (MQ=255)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`