BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,237,247	+C	intergenic (+60/‑337)	ygjT → / → ygjU	putative transport protein/putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,237,245	1	.	C	100.0%	481.7 / NA	156	intergenic (+58/‑339)	ygjT/ygjU	putative transport protein/putative transport protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (86/70); total (86/70)

Only 100 of 178 total aligned reads displayed.

ATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑T‑CCTCT‑CCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGG  >  NC_000913/3237156‑3237332

aTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑cc                                                                                       <  1:72246/93‑1 (MQ=255)

aTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑cc                                                                                       >  2:2816037/1‑93 (MQ=255)

 ttATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑ccc                                                                                      >  1:539296/1‑92 (MQ=255)

 ttATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑ccc                                                                                      >  2:1783988/1‑92 (MQ=255)

    tCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑cccttc                                                                                   >  1:1045885/1‑89 (MQ=255)

    tCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTc‑tccctct‑cccttc                                                                                   >  1:3615634/1‑89 (MQ=255)

      ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCa                                                                                  >  1:3253399/1‑93 (MQ=255)

      ggCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCa                                                                                  <  2:3214581/93‑1 (MQ=255)

       gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAg                                                                                 <  1:1915982/93‑1 (MQ=255)

       gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAg                                                                                 <  1:668071/93‑1 (MQ=255)

       gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAg                                                                                 <  2:4411050/93‑1 (MQ=255)

       gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAg                                                                                 <  1:3454267/93‑1 (MQ=255)

          tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGga                                                                              <  1:2134429/93‑1 (MQ=255)

          tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGga                                                                              >  2:2479540/1‑93 (MQ=255)

          tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGga                                                                              <  2:2757400/93‑1 (MQ=255)

          tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGga                                                                              <  1:3794452/93‑1 (MQ=255)

          tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGga                                                                              <  1:4614689/93‑1 (MQ=255)

          tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGga                                                                              >  2:3583448/1‑93 (MQ=255)

          tGATAAGCAGCGGGGGGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGga                                                                              >  2:2631416/1‑93 (MQ=255)

           gATAAGCAGCGGGGTGTATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgag                                                                             <  2:2555723/93‑1 (MQ=255)

           gATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgag                                                                             <  1:117948/93‑1 (MQ=255)

            aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgagg                                                                            <  1:4406982/93‑2 (MQ=255)

            aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgagg                                                                            >  2:1329748/1‑92 (MQ=255)

            aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgagg                                                                            <  1:300510/93‑2 (MQ=255)

            aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgagg                                                                            <  2:3195030/93‑2 (MQ=255)

            aTAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgagg                                                                            <  2:298148/93‑2 (MQ=255)

             tAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTCCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGgaggg                                                                           <  2:1790270/93‑3 (MQ=255)

              aaGCAGCGGGGTGGTTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCGCCGTTTTCAC‑CCTCTCCCTTCCAGGGAgggg                                                                          <  1:4019498/93‑1 (MQ=255)

                gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGt                                                                        <  2:2339310/93‑1 (MQ=255)

                gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGt                                                                        <  2:2805972/93‑1 (MQ=255)

                 cagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTGACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTc                                                                       >  1:2685863/1‑93 (MQ=255)

                     ggggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCgggg                                                                   <  1:3957961/93‑1 (MQ=255)

                       ggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTg                                                                 >  2:2454508/1‑93 (MQ=255)

                        gTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGa                                                                >  1:3013331/1‑93 (MQ=255)

                        gTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGa                                                                <  1:4105053/93‑1 (MQ=255)

                         tGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAg                                                               <  1:864956/93‑1 (MQ=255)

                         tGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAg                                                               <  2:971537/93‑1 (MQ=255)

                          ggATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCATCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAgg                                                              <  1:2512235/93‑1 (MQ=255)

                           gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAggg                                                             <  1:1073197/93‑1 (MQ=255)

                             tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTa                                                           >  1:2069932/1‑93 (MQ=38)

                             tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGGGAGGGTa                                                           >  1:3293078/1‑93 (MQ=255)

                               aTTTTTAATCTGCCTAAGCCGTGTACTCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAt                                                         <  2:3795048/93‑1 (MQ=255)

                                tttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAtt                                                        <  1:724597/93‑1 (MQ=255)

                                 ttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAttt                                                       >  2:3661331/1‑93 (MQ=38)

                                  tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAtttt                                                      <  1:4191695/93‑1 (MQ=255)

                                  tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAtttt                                                      >  2:102199/1‑93 (MQ=38)

                                  tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAAtttt                                                      >  2:568835/1‑93 (MQ=38)

                                    tAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTc                                                    <  1:3418323/93‑1 (MQ=38)

                                    tAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTc                                                    <  1:2325028/93‑1 (MQ=38)

                                     aaTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCg                                                   >  1:1579819/1‑93 (MQ=37)

                                      aTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGc                                                  >  1:1484855/1‑93 (MQ=38)

                                      aTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGc                                                  >  2:477637/1‑93 (MQ=38)

                                       tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCa                                                 <  2:4468614/93‑1 (MQ=37)

                                       tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCa                                                 >  2:1599250/1‑93 (MQ=38)

                                       tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCa                                                 <  2:342694/93‑1 (MQ=37)

                                         tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                               >  1:2601423/1‑93 (MQ=38)

                                         tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                               >  2:370212/1‑93 (MQ=38)

                                         tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCAcc                                               >  1:4313680/1‑93 (MQ=38)

                                             tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                           >  1:764676/1‑93 (MQ=38)

                                             tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                           >  2:2888891/1‑93 (MQ=38)

                                             tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                           >  1:2037199/1‑93 (MQ=38)

                                             tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATg                                           >  1:3151706/1‑93 (MQ=38)

                                                gCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTg                                        <  2:2922445/93‑1 (MQ=38)

                                                   gtgtACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGcc                                     >  1:787263/1‑93 (MQ=37)

                                                    tgtACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt                                    >  1:3846761/1‑93 (MQ=37)

                                                    tgtACCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCt                                    >  2:2034739/1‑93 (MQ=37)

                                                      tACCCTGTCATCAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGt                                  <  2:2487338/93‑1 (MQ=25)

                                                       tcccTGTCATTAACATGAGCACCGTTTTCGC‑CCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGtt                                 <  2:3303800/92‑1 (MQ=37)

                                                       aCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGtt                                 >  1:4461096/1‑93 (MQ=37)

                                                       aCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGtt                                 >  1:3348101/1‑93 (MQ=37)

                                                       aCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGtt                                 <  2:3339304/93‑1 (MQ=38)

                                                       aCCCTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGtt                                 >  1:1614813/1‑93 (MQ=37)

                                                        cccTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                >  1:2650788/1‑93 (MQ=37)

                                                          cTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTgcc                              >  1:3703481/1‑93 (MQ=25)

                                                          cTGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                              >  1:212099/1‑93 (MQ=37)

                                                          cTGTCATTAACATGAGCACCGTGTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                              <  1:1692416/93‑1 (MQ=37)

                                                           tGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccc                             >  2:3085465/1‑93 (MQ=37)

                                                           tGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccc                             >  2:3359920/1‑93 (MQ=37)

                                                           tGTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcccc                             <  2:3524666/93‑1 (MQ=37)

                                                            gTCATTAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCt                            >  1:4522276/1‑93 (MQ=37)

                                                                ttAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCTcc                        >  2:1369619/1‑93 (MQ=25)

                                                                ttAACATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                        >  2:4360257/1‑93 (MQ=25)

                                                                   aCATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTa                     <  1:4276925/93‑1 (MQ=21)

                                                                   aCATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTa                     >  1:4338666/1‑93 (MQ=21)

                                                                    cATGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTaa                    <  1:3042541/93‑1 (MQ=21)

                                                                     aTGAGCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAc                   >  1:2320777/1‑93 (MQ=21)

                                                                         gCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTTCCCCCCCCCCCAccccc               >  2:4155983/1‑91 (MQ=18)

                                                                         gCACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc               <  2:1498509/93‑1 (MQ=18)

                                                                         gCACCGTTTTC‑TCCCTCTCCCTGCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc               <  2:3958926/93‑1 (MQ=18)

                                                                          cACCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctct              <  1:2720669/93‑1 (MQ=18)

                                                                           aCCGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCtctc             <  1:920949/93‑1 (MQ=18)

                                                                             cGTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCcccc           >  1:178225/1‑93 (MQ=18)

                                                                              gTTTTC‑TCCCTCTCCCTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcccc          <  2:3605194/93‑1 (MQ=17)

                                                                                   tctccctctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAc      <  2:4530669/89‑1 (MQ=18)

                                                                                   tctccctctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAAc      <  1:3487197/89‑1 (MQ=18)

                                                                                      ccctctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg   <  1:3294758/92‑1 (MQ=18)

                                                                                      ccctctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg   <  1:2586593/92‑1 (MQ=18)

                                                                                       cctctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCCCCCCCACCCCCTCCCCAAAcacgg  >  2:1192535/1‑89 (MQ=18)

                                                                                       cctctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg  <  2:1699885/93‑1 (MQ=255)

                                                                                       cctctcccTTCCAGGGAGGGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg  <  1:2767414/93‑1 (MQ=255)

ATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTTC‑T‑CCTCT‑CCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGG  >  NC_000913/3237156‑3237332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`