| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,410,534 | (G)5→6 | coding (569/663 nt) | envR ← | putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,410,529 | 1 | . | G | 98.4% | 398.6 / ‑1.4 | 128 | coding (574/663 nt) | envR | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base G (90/36); total (90/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.65e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
ATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑GGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCAT > NC_000913/3410438‑3410616 | tttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑gg < 2:553548/93‑1 (MQ=255) tttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑gg > 2:1899323/1‑93 (MQ=255) ttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑ggg < 2:526061/93‑1 (MQ=255) ttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑ggg < 1:4169304/93‑1 (MQ=255) ttACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑ggg > 1:2128587/1‑93 (MQ=255) cATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑gggg‑gg < 2:1743081/93‑2 (MQ=255) aTGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑gggg‑ggc > 2:4140624/1‑91 (MQ=255) tGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑gggg‑ggct > 1:1456855/1‑90 (MQ=255) cacTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGt > 1:1024961/1‑93 (MQ=255) acTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGtt > 2:2953467/1‑93 (MQ=255) acTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGtt > 1:1530764/1‑93 (MQ=255) acTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGtt < 2:4304182/93‑1 (MQ=255) acTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGtt > 2:1294992/1‑93 (MQ=255) acTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGtt < 2:2271623/93‑1 (MQ=255) cTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGttt > 1:2175233/1‑93 (MQ=255) cTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGttt < 2:4618929/93‑1 (MQ=255) ttAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTta > 1:98055/1‑93 (MQ=255) tAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTtat > 2:181577/1‑93 (MQ=255) aaTTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTtata > 1:729141/1‑93 (MQ=255) aaTTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTtata > 1:44552/1‑93 (MQ=255) aaTTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTtata < 1:2475570/93‑1 (MQ=255) attcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATaa > 2:4677745/1‑93 (MQ=255) attcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATaa < 1:3822087/93‑1 (MQ=255) attcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATaa > 1:744132/1‑93 (MQ=255) attcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATaa < 2:645583/93‑1 (MQ=255) ttcattcGTTTGATGAGTTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATaaa < 2:287175/93‑1 (MQ=255) ttcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATaaa > 1:2708781/1‑93 (MQ=255) tcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAg > 2:2938107/1‑93 (MQ=255) tcattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAg > 2:1975684/1‑93 (MQ=255) cattcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGa > 1:2071211/1‑93 (MQ=255) attcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGAt < 2:139459/93‑1 (MQ=255) ttcGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATc < 1:1684617/93‑1 (MQ=255) cGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCGTGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCAt < 1:777233/93‑1 (MQ=255) gTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATa > 2:173537/1‑93 (MQ=255) tttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATaa > 1:3870381/1‑93 (MQ=255) tttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATaa < 1:899727/93‑1 (MQ=255) ttGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAAc > 1:3198317/1‑93 (MQ=255) tgatgaATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAAcc < 2:2324185/93‑1 (MQ=255) gatgaATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAAccc < 1:3151221/93‑1 (MQ=255) atgaATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCg > 2:3358113/1‑93 (MQ=255) tgaATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGc > 1:4265737/1‑93 (MQ=255) aattaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCa > 2:410079/1‑93 (MQ=255) aattaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCa > 2:3512398/1‑93 (MQ=255) attatttGCGTTATTTTTTCATCTGGCATGAACTTTCTTAATCCGTTATCGACA‑A‑GG‑GCGGGGG‑G‑CTTGTTAATAAAGATCATACCCCGCCat < 2:2716791/93‑1 (MQ=255) attaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCat > 1:872467/1‑93 (MQ=255) ttaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCata > 2:453776/1‑93 (MQ=255) ttaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCata < 1:2929679/93‑1 (MQ=255) ttaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCata > 1:3993556/1‑93 (MQ=255) tgaattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTCTATAAAGATCATAACCCGCCata < 1:1319140/91‑1 (MQ=255) taattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCatat > 1:1763070/1‑93 (MQ=255) taattTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCatat < 1:582329/93‑1 (MQ=255) aattTCTTTAGTTTTTCATCGGGAATAAAATTTTTTAAAACGTTATCGACC‑G‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATACCCCGCCATAtt < 2:1826485/93‑1 (MQ=255) tttCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATAttaa > 1:3754533/1‑91 (MQ=255) tttCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCa > 1:4320091/1‑93 (MQ=255) tttCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCa > 1:1885867/1‑93 (MQ=255) ttCTTTTTGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGCCC‑A‑GA‑GCGGGGG‑G‑TTTGTTTATAAAGATCATACCCCGCCATATTCAt < 2:1385319/93‑1 (MQ=255) tCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑TTTGTTTATAAAGATCATAACCCGCCATATTCAtt < 1:3406893/93‑1 (MQ=255) gTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTaa > 1:542565/1‑93 (MQ=255) ttATTTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATACCCCGCCATATTCATTAAc < 1:1111142/93‑1 (MQ=255) ttATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAAc > 1:4601176/1‑93 (MQ=255) tATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAAcc > 1:4008192/1‑93 (MQ=255) ttGTTTTCATCTGGAATGAACTTTCTTAATACGTTATCGACC‑A‑GA‑GC‑GGGG‑GTCTTTTTTATAAAGATCATAACCCGCCATATTCATTAACCa < 1:2313355/92‑1 (MQ=255) tGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAg > 2:3152488/1‑93 (MQ=255) tttttCATCTGGCATGAACATTCTTAATACGTTATCGCCC‑A‑GA‑GCGGGGG‑G‑TTTTTTTATAAAGATCATACCCCGCCATATTCATTAACCAGt < 2:483531/92‑1 (MQ=255) gTTTTCATCTGGCATAAACATTCTTAATCCGTTATCGACC‑A‑GA‑GCGGGGG‑G‑TTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGt < 1:3567331/93‑1 (MQ=255) ttCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGtttt > 1:1687012/1‑93 (MQ=255) cATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGa > 2:1085679/1‑93 (MQ=255) cATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGa > 2:4212982/1‑93 (MQ=255) cATCTGGAAAAAACATTCTTAATACGTTATCGACC‑A‑GAGGG‑GGGG‑G‑CTTGTTTAAAAAGATAATACCCCGCCATATTCATTAACCAGTTTTGa < 2:2931027/93‑1 (MQ=255) aTCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGaa > 1:2240146/1‑93 (MQ=255) aTCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGaa > 2:4378178/1‑93 (MQ=255) aTCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGaa > 2:2056699/1‑93 (MQ=255) aTCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGaa > 2:3186523/1‑93 (MQ=255) aTCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGaa > 2:339137/1‑93 (MQ=255) ggaaTGACCATTCTTAATAGTTTTACGACC‑A‑GG‑GC‑GGGGTG‑CTTTTTTATAAAAATCATAACCCGCCATATTCATTAACCAGTTTTGAACAAt < 2:706356/90‑1 (MQ=255) gCATGAACATTCTTAATACGTTATCGCCC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAAtt < 1:3673225/93‑1 (MQ=255) gCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAAtt > 2:944878/1‑93 (MQ=255) cATGAATTTTGTTAACACGTTACCCACC‑C‑GA‑GCGGGGG‑G‑CTTGTTTATAAACATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTc < 2:2458777/93‑1 (MQ=255) aTGAACATTCTTAATAGTTTATCGACG‑A‑GA‑GC‑GGGG‑GTTTTGTTTAAAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTcc < 2:524915/93‑1 (MQ=255) tGAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑TTTGTTTATAAAAATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCg < 2:635777/93‑1 (MQ=255) aaaaCATTTTTAATAATTTAACAACG‑A‑GG‑GC‑GGGG‑GTTTTTTTTATAAAAATCACACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCg < 2:3185709/91‑1 (MQ=255) gAACATTCTTAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGc > 1:3280399/1‑93 (MQ=255) tttttAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑TTTGTTTAAAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg < 1:1034105/90‑1 (MQ=255) ttCTTAATCCGTTATCGACCGG‑GG‑GG‑GGGG‑G‑CTTGTTTAAAAAGATAATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg < 2:3570938/93‑1 (MQ=255) ttCTTAATACTTTATCGACG‑A‑GA‑GC‑GGGGTG‑TTTTTTTATAAAGATCAAACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAg < 2:389653/93‑1 (MQ=255) ttAATACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCa > 1:2789620/1‑93 (MQ=255) aTACGTTATCGACC‑A‑GA‑GG‑GGGG‑GTTTTGTTTAAAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCa < 2:3468662/93‑1 (MQ=255) aTACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCa > 1:1994257/1‑93 (MQ=255) tACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTTTTTAAAAAAATAATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCAt < 2:3830278/93‑1 (MQ=255) tACGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCAt > 2:2172805/1‑93 (MQ=255) cGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTTCGCTGAAGGCACCATCa > 2:4472798/1‑93 (MQ=255) cGTTATCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCa > 1:2646363/1‑93 (MQ=255) ttATCGACC‑AGGG‑GG‑GGGG‑G‑CTTGTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaat < 2:2245651/93‑1 (MQ=255) tATCGACC‑A‑GG‑GC‑GGGG‑GTCTTTTTTATAAAGATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaata < 2:2578741/93‑1 (MQ=255) tCGACC‑A‑GA‑GG‑GGGG‑GTTTTTTTTAAAAAAATCATACCCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataat < 2:3968497/93‑1 (MQ=255) tCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataat > 1:3043921/1‑93 (MQ=255) tCGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataat > 1:4070086/1‑93 (MQ=255) gcGACC‑A‑GA‑GCGGGGG‑G‑CTTGTTAATAAAGACCAAAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCaataat < 2:2643282/92‑1 (MQ=255) a‑ga‑gCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatcat > 1:3585671/1‑93 (MQ=255) a‑ga‑gCGGGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAatcat > 1:3947175/1‑93 (MQ=255) | ATTTACATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTTATCGACC‑A‑GA‑GC‑GGGG‑G‑CTTGTTTATAAAGATCATAACCCGCCATATTCATTAACCAGTTTTGAACAATTCCGCTGAAGGCACCATCAATAATAATCAT > NC_000913/3410438‑3410616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |