| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,874,663 | (G)5→6 | intergenic (‑83/+32) | yidA ← / ← b3698 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,874,658 | 1 | . | G | 99.5% | 614.4 / ‑3.9 | 197 | intergenic (‑78/+37) | yidA/b3698 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (103/93); total (104/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.52e-01 | |||||||||||
Only 100 of 258 total aligned reads displayed.
GAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGATCGT > NC_000913/3874566‑3874747 | gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa‑aaa > 1:3269368/1‑93 (MQ=255)gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa‑aaa < 2:3166024/93‑1 (MQ=255)gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa‑aaa < 1:1447362/93‑1 (MQ=255)gAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa‑aaa > 1:1043723/1‑93 (MQ=255) aGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑g > 2:3402388/1‑93 (MQ=255) gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg > 2:4484714/1‑93 (MQ=255) gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg < 1:112856/93‑1 (MQ=255) tttAATAGCCGTGAGTTCCCCTGGTAGATTGGTTACTGACCCATGCTAACGCGATTCCGCTCATAAATTCGTCGAACACCCGCGGGG‑AAA‑gg‑g > 2:3961012/1‑93 (MQ=255) tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg‑g > 1:989609/1‑93 (MQ=255) tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg‑g < 1:3843084/93‑1 (MQ=255) tAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGGCCCATGCTAACGCGAATCCGCTCAAAAACCAGGACAACCCCCCGGGGA‑AAA‑gg‑gg‑g < 2:1618510/93‑1 (MQ=255) tAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg‑gg‑g < 1:1076743/93‑1 (MQ=255) aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg‑gg‑gg < 1:39824/93‑2 (MQ=255) tAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg‑gg‑ggat < 1:4492010/93‑4 (MQ=255) tAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg‑gg‑ggag > 1:4114021/1‑90 (MQ=255) aGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑gg‑gg‑ggatg < 2:1395067/93‑5 (MQ=255) cgtGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCaa > 1:2818538/3‑93 (MQ=255) gtGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAAc > 2:4078732/2‑93 (MQ=255) gtGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAAc > 1:3585459/2‑93 (MQ=255) gtGAGTTCCCCAGGGAGATTGGTTCCTGACCCATGCTTACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGACAAG‑GG‑GG‑GATGCaat > 2:564978/2‑92 (MQ=255) gAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAAcgc > 1:257514/1‑93 (MQ=255) gAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGAA‑AAAGGG‑GG‑GTTGCAAcgc < 2:4578460/93‑1 (MQ=255) tCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGt < 1:56230/93‑1 (MQ=255) cccAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTg < 1:4191689/93‑1 (MQ=255) ccAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGc > 2:1833614/1‑93 (MQ=255) ccAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGc > 2:2747624/1‑93 (MQ=255) ccAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGc > 1:1717912/1‑93 (MQ=255) cAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCg < 1:2767131/93‑1 (MQ=255) aGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGt < 2:1892445/93‑1 (MQ=255) ggTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTg > 1:4373642/1‑93 (MQ=255) ggTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTg > 1:667436/1‑93 (MQ=255) ggTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTg > 2:2885321/1‑93 (MQ=255) gTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGc > 1:3519307/1‑93 (MQ=255) gATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTcc > 2:2685973/1‑93 (MQ=255) gATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTcc > 2:3287720/1‑93 (MQ=255) gATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTcc > 2:3648389/1‑93 (MQ=255) gATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTcc > 1:178688/1‑93 (MQ=255) gATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTcc > 1:1207818/1‑93 (MQ=255) ttGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCt > 2:793302/1‑93 (MQ=255) ttGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCt < 2:879063/93‑1 (MQ=255) ccTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGc < 2:1562057/93‑1 (MQ=255) cTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCt > 1:557454/1‑93 (MQ=255) cTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCt < 2:2346296/93‑1 (MQ=255) gACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACCCCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTTCTTa < 2:3014994/93‑1 (MQ=255) gACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTa < 1:4351068/93‑1 (MQ=255) cccATGCTAACGCGATTCCGCTAAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGc < 2:13723/93‑1 (MQ=255) cATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCgg > 2:3039160/1‑93 (MQ=255) tGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGaa > 1:2089081/1‑93 (MQ=255) gCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAag > 2:712407/1‑93 (MQ=255) gCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAag > 1:2492912/1‑93 (MQ=255) cTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAaga < 2:4177321/93‑1 (MQ=255) cTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAaga < 2:311176/93‑1 (MQ=255) cTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAaga > 1:2441262/1‑93 (MQ=255) cTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAaga < 2:2504255/93‑1 (MQ=255) cTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAaga < 2:736869/93‑1 (MQ=255) tAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAagag < 1:2681772/93‑1 (MQ=255) gcgATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTc < 1:1350225/93‑1 (MQ=255) cgATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTcc > 2:4336096/1‑93 (MQ=255) gATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTccc > 2:656304/1‑93 (MQ=255) gATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTccc < 2:3782404/93‑1 (MQ=255) gATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTccc > 1:3934499/1‑93 (MQ=255) aTTCCGCTCAAAAATCAGTACAACACGCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCt < 1:1925361/93‑1 (MQ=255) ccGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTc < 1:2886675/93‑1 (MQ=255) cGCTCAAAAATCAGTACACCACCCGAGGTA‑AAA‑GGTGG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTca < 2:4445295/93‑1 (MQ=255) cGCTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTca > 2:530303/1‑93 (MQ=255) cTCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTcagc > 2:1234994/1‑93 (MQ=255) tCAAAAATCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTcagca < 2:2842714/93‑1 (MQ=255) aaTCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTcc < 2:3254799/93‑1 (MQ=255) aaTCAGTAAAACGCCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTcc < 1:1643987/93‑1 (MQ=255) aTCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCa < 2:2934068/93‑1 (MQ=255) aTCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCa < 1:899514/93‑1 (MQ=255) tCAGTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCAt < 1:3423495/93‑1 (MQ=255) tCAGTAAAGCACCGGAGGTA‑AAA‑GG‑GGAGATGCAACGCGCGTTGCGTGCTCCCTTTTTTCTTAGCGGAGGAGTTTCCCTTGCAGCAGTTCCAt < 2:2038361/93‑1 (MQ=255) gTACAACACCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGcc < 1:503675/93‑1 (MQ=255) acaacaCCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTg > 1:4523170/1‑93 (MQ=255) acaacaCCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTCTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTg < 1:2513762/93‑1 (MQ=255) aacaCCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCg > 1:814651/1‑93 (MQ=255) acacCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCgg < 1:160798/93‑1 (MQ=255) cacCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGa > 2:3345215/1‑93 (MQ=255) cacCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGa > 2:1726186/1‑93 (MQ=255) acCCGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGaa > 2:2419180/1‑93 (MQ=255) cccGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGaaa > 1:2213089/1‑93 (MQ=255) cccGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGaaa > 1:1502632/1‑93 (MQ=255) cGAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGc < 1:2419788/93‑1 (MQ=255) cGAGGGA‑AAAGGG‑GG‑GATGCAACGCGAGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTAAGCAGTTCTATGCCCGCGGTAAga > 2:3587888/1‑92 (MQ=255) gAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCa < 1:4437059/93‑1 (MQ=255) gAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCa < 1:1694009/93‑1 (MQ=255) gAGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCa > 1:784218/1‑93 (MQ=255) aGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAg > 2:4370276/1‑93 (MQ=255) aGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAg > 1:154110/1‑93 (MQ=255) aGGGA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAg > 1:4381575/1‑93 (MQ=255) gggA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGa < 2:4593212/93‑1 (MQ=255) gggA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGa < 2:2201640/93‑1 (MQ=255) gggA‑AAAGGG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGa < 1:883834/93‑1 (MQ=255) ggaa‑aag‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGAt < 1:2291461/90‑1 (MQ=255) ggaa‑aag‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGAt < 1:1261756/90‑1 (MQ=255) gaa‑aag‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGATc < 2:3714303/91‑1 (MQ=255) gaa‑aag‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGATc < 1:2173553/91‑1 (MQ=255) gaa‑aag‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGATc < 1:2945797/91‑1 (MQ=255) a‑aag‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGATCGt > 2:766824/1‑93 (MQ=255) | GAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGA‑AAA‑GG‑GG‑GATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCCCTTTCAGCAGTTCCATGCCTGCGGAAAGCAGATCGT > NC_000913/3874566‑3874747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |