| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,124 | +G | intergenic (+58/+26) | ilvC → / ← ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,123 | 1 | . | G | 98.8% | 461.5 / ‑1.5 | 168 | intergenic (+57/+27) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (32/134); total (33/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
ACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑A‑‑C‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC > NC_000913/3957034‑3957210 | aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AA‑g < 1:4068166/93‑1 (MQ=21) gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACCGGGAGAGGGAGAAAACACT‑C‑AA‑ggcc > 2:705210/1‑90 (MQ=21) atGAAGCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTtc < 2:4422825/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTtc < 1:985067/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTtc < 2:560493/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTtc < 1:2604471/93‑1 (MQ=18) aggAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTtc < 1:3394723/91‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTcc < 1:1021635/93‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTcc < 2:2060299/93‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTcc < 1:749614/93‑1 (MQ=18) aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCt < 1:844497/93‑1 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTg < 2:3923726/93‑1 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTg < 2:2491726/93‑1 (MQ=18) cGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTgg < 2:1454695/93‑1 (MQ=18) gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGga < 1:4268882/93‑1 (MQ=18) gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGga < 2:2636398/93‑1 (MQ=18) gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGga < 2:1276195/93‑1 (MQ=18) tATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGgag < 2:3431472/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 2:3295827/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 1:4495315/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 2:2127137/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 2:2859983/93‑1 (MQ=18) cTGTTGCAGGTTAAGCGTGCGCTGATACCACTACT‑CCG‑‑A‑‑CCGTCTCCTACAGGGAGAGGGAGAAAAAACT‑CGAG‑GCATGCTCCTGGAGAAGGc < 2:1596728/93‑1 (MQ=12) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCt < 2:2772129/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCt < 1:4620925/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCGTCTCCTGGAGAAGGCCt < 2:760563/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCC‑‑ACCC‑‑TCTCCCACAGGGGGAGGGAGAAAAAACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCt > 2:1604277/1‑93 (MQ=18) ttGCGGTTTAAGTGCGCGCTGATCCCCTCCCC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCtt < 2:814734/93‑1 (MQ=18) ttGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCtt < 1:1904503/93‑1 (MQ=18) gCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGTCTTCTCCTGGAGAAGGCCTTGc < 1:3569633/93‑1 (MQ=18) ttAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTa < 2:3801561/93‑1 (MQ=18) ttAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTa < 1:2471310/93‑1 (MQ=18) aaGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGt < 2:1236878/93‑1 (MQ=18) aaGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGt < 2:2939972/93‑1 (MQ=18) aaGGGCGCGCTGATGCCCTCACC‑CCGGCC‑‑C‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGt < 2:936676/93‑1 (MQ=17) aGTGCGCGCTGGTGTCCTCACCGTCG‑‑AC‑C‑‑TCTCCGCCAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCCCCGGGAGAGGCCCTTGCTATTAgct < 2:734400/93‑3 (MQ=12) aGTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGtt < 1:504056/93‑1 (MQ=18) aGTGCGCGCGGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGtt < 2:2958789/93‑1 (MQ=18) gTGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTg < 1:236676/93‑1 (MQ=18) tGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGc < 1:3772101/93‑1 (MQ=21) tGCGCGCTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGc < 2:3366499/93‑1 (MQ=21) gccgcgcAGATGCCCTCCCC‑CCG‑‑ACCC‑‑TCTCCGACAGGGATAGAGAGAAAACACA‑C‑AAGGCCTTCTCCTGGAGAAGTCCTTGCTATTAGTTGc < 2:2475745/91‑1 (MQ=255) gcgcgcTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 1:682766/93‑1 (MQ=21) cgcgcTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 1:3637716/93‑1 (MQ=21) gcTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc < 1:2040369/93‑1 (MQ=21) gcTGATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc < 2:1408232/93‑1 (MQ=21) gATGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAgt < 2:2389347/93‑2 (MQ=25) tGCCCTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTAc < 1:3936794/93‑1 (MQ=25) cccTCACC‑CCGCCC‑‑C‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCt < 2:1689805/93‑1 (MQ=21) cTCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTa < 2:4279387/93‑1 (MQ=25) tCACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTaa < 2:4464045/93‑1 (MQ=25) ccACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCTGTACAGTACCTTaa < 2:863369/92‑1 (MQ=25) cACC‑CCG‑‑ACCC‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAat < 1:1326695/93‑1 (MQ=25) gccc‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGa < 1:3633506/90‑1 (MQ=38) accc‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGa < 1:1402529/90‑1 (MQ=38) cc‑‑tctCCCACAGGGAGAGGGAGAAAACACTCC‑AG‑GCGTTCGCCTGGAGGAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata > 2:3088120/2‑93 (MQ=37) cc‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata < 1:3186614/92‑1 (MQ=39) cc‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata > 1:2979697/2‑93 (MQ=39) cc‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata < 1:2859201/92‑1 (MQ=39) cc‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata < 2:2284714/92‑1 (MQ=39) cc‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTGCTCCTGTAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata < 2:4284422/92‑1 (MQ=38) c‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGatat > 1:2126522/1‑93 (MQ=255) c‑‑tctCCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGatat > 2:2106175/1‑93 (MQ=255) tctcCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATc < 2:484780/93‑1 (MQ=255) tctcCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATc > 2:196185/1‑93 (MQ=255) tctcCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATc < 1:2754923/93‑1 (MQ=255) ctcCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATcc < 2:3582810/93‑1 (MQ=255) tcCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCg > 1:2500930/1‑93 (MQ=255) tcCCACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCg > 2:1540502/1‑93 (MQ=255) ccACAGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGaa > 1:3675466/1‑93 (MQ=255) cacaGGGAGAGGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAAc > 1:1416010/1‑93 (MQ=255) agggagagggagAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTgg < 2:2216831/93‑1 (MQ=255) agggagagggagAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTgg < 1:1081728/93‑1 (MQ=255) agggagagggagAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTgg < 2:2002035/93‑1 (MQ=255) agggagagggagAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTgg < 2:1063886/93‑1 (MQ=255) gggagagggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTggg < 2:3241252/93‑1 (MQ=255) ggagagggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgt < 2:2956522/93‑1 (MQ=255) gagagggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtg > 2:962813/1‑93 (MQ=255) gagagggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtg < 1:1502669/93‑1 (MQ=255) agagggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtgt < 2:1131661/93‑1 (MQ=255) agagggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtgt > 1:4163294/1‑93 (MQ=255) gagggagaCAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGtgtg > 2:4560337/1‑93 (MQ=255) gagggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGtgtg > 1:1026224/1‑93 (MQ=255) agggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGc < 1:4023189/93‑1 (MQ=255) ggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAg < 1:4592480/93‑1 (MQ=255) ggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAg < 2:3939911/93‑1 (MQ=255) ggagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAg < 1:4563580/93‑1 (MQ=255) gagaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc > 2:3659898/1‑93 (MQ=255) agaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCg < 1:183794/93‑1 (MQ=255) agaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCg < 1:3598720/93‑1 (MQ=255) gaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg > 1:3685896/1‑93 (MQ=255) gaAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg > 2:1141631/1‑93 (MQ=255) aaaCACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc > 1:2411811/1‑93 (MQ=255) aaaCACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc > 1:21929/1‑93 (MQ=255) aaaCACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc < 2:4147799/93‑1 (MQ=255) acacT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCg > 1:1781579/1‑93 (MQ=255) acacT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCg < 1:914659/93‑1 (MQ=255) acT‑C‑AAGGCCTTCTCCTTGAGAAGGCCTTGCTATTAGTTGCGGTACAGTCCCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 1:3371484/93‑1 (MQ=255) acT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 2:3115469/93‑1 (MQ=255) acT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 1:1437352/93‑1 (MQ=255) | ACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACC‑CCG‑‑A‑‑C‑‑TCTCCCACAGGGAGAGGGAGAAAACACT‑C‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC > NC_000913/3957034‑3957210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |