| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,551 | +T | intergenic (‑120/‑741) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,550 | 1 | . | T | 99.3% | 547.0 / ‑4.3 | 152 | intergenic (‑119/‑742) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (75/76); total (75/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 163 total aligned reads displayed.
TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑C‑‑T‑G‑‑C‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG > NC_000913/3957469‑3957626 | aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑T‑ccc < 1:1707689/93‑2 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑T‑ccct > 2:4653394/1‑91 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑T‑ccctca > 2:3178309/1‑89 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAgg < 2:4503788/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAgg < 1:4443476/93‑1 (MQ=255) ttcGCAGATGCTAACGTAAGTGTCAGTCAGGCAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAggg < 1:3731099/91‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAggg > 2:4453096/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGCGCATATATGGCAAAAGCCC‑GGGAAAT‑C‑C‑‑G‑GGCC‑TAGCAGG‑TCCCTCAAggg > 1:761578/1‑93 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAgggg < 2:1534196/93‑1 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGga > 2:2369905/1‑93 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAgggggg > 1:1666371/1‑91 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACAGATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGgag > 1:3295042/1‑93 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGgag > 1:2855760/1‑93 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTTCCTATATCGCAAAAGCCCGGGAAAAA‑C‑G‑‑G‑G‑‑CGTCGCAGG‑TCCCTCAAAGGgaga > 1:4587355/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGgagga > 1:3216590/1‑91 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACCTATATGGCAAAAGCCCGGGAAAAT‑CGG‑‑G‑G‑‑T‑TCGCAGG‑TCCCTCAAGGGGGGaaa > 2:2847323/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGaaa > 2:3502267/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGaaa > 1:296912/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAAc < 1:309468/93‑1 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACt > 1:366775/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGGAC‑CCTCAAGGGGAGAAAACtt > 1:1284556/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACtt > 2:381637/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACtt > 1:4197072/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACtt < 1:1873936/93‑1 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACtt > 2:2663876/1‑93 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑C‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTa < 2:2275360/93‑1 (MQ=255) tAACGTAATGGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTa < 1:850636/93‑1 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAg < 2:1949860/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAgg < 1:2895069/93‑1 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAggg > 2:4257265/1‑93 (MQ=255) tAATTGTCNGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGcc < 2:3986503/93‑1 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CGGG‑G‑‑T‑TCGCAGG‑TCCCCCAAGGGGAGAAAACTTAggggc > 2:2508064/1‑91 (MQ=255) tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGcc < 1:2078765/93‑1 (MQ=255) atggtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑C‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc < 2:677083/90‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc < 2:3892165/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc < 1:1020261/93‑1 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCctct > 2:3941193/1‑93 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:4150698/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:3208865/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:1273965/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:3544901/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt < 2:130383/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt > 1:4657640/1‑93 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGGCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCCATg > 2:1630245/1‑93 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg < 1:538367/93‑1 (MQ=255) catacagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAC‑C‑C‑‑G‑GGTT‑TCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg < 2:4000893/89‑1 (MQ=255) gtcagGGAGTGGCTGGTACGTATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 2:480700/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 2:2999988/93‑1 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAATCC‑C‑‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGGAAACTTAGGGCCTCTATGGGCt > 2:2409313/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt < 1:1350816/93‑1 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa < 2:409295/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 1:3931279/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:3007812/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGAAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:1212677/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:1766907/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 2:241424/1‑93 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑C‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 1:1499344/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:3307295/93‑1 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 1:36160/93‑1 (MQ=255) aGTGGCTTGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 2:1418735/93‑1 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt < 2:4116896/93‑1 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 2:956580/1‑93 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:2242147/1‑93 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑C‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:98210/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 2:3399515/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa > 2:3068860/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:1675130/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:2609307/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa > 2:4242645/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:395835/93‑1 (MQ=255) gCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt > 2:4421348/1‑93 (MQ=255) tGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa < 2:1197357/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:705295/93‑1 (MQ=255) gTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc > 1:3286258/1‑93 (MQ=255) aCATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg > 2:3427336/1‑93 (MQ=255) aCATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:1031198/93‑1 (MQ=255) aCATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg > 2:180963/1‑93 (MQ=255) cATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 2:1485055/1‑93 (MQ=255) cATATATGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg < 1:3476472/93‑1 (MQ=255) atatatGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 2:375972/93‑1 (MQ=255) atatatGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 1:4603493/1‑93 (MQ=255) atatatGGCAAAAGCCC‑GGAAAAT‑C‑C‑‑GGG‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 1:476473/1‑93 (MQ=255) atatGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 2:265810/93‑1 (MQ=255) tatGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 1:1297822/1‑93 (MQ=255) tatGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 2:510672/1‑93 (MQ=255) atGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg > 2:36648/1‑93 (MQ=255) tGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 1:3827508/1‑93 (MQ=255) tGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 1:3797286/1‑93 (MQ=255) tGGCAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 1:3142560/1‑93 (MQ=255) cAAAAGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat > 1:4016532/1‑93 (MQ=255) aaaaGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGCTGGttatt > 1:2239000/1‑93 (MQ=255) aaaaGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:4373075/1‑93 (MQ=255) aaaaGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:3342342/1‑93 (MQ=255) aaaaGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt < 1:1949039/93‑1 (MQ=255) aaaaGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 2:3647666/1‑93 (MQ=255) aaGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt > 1:1421316/1‑93 (MQ=255) aGCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 2:1014414/93‑1 (MQ=255) gCCC‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat > 1:4028533/1‑93 (MQ=255) ccc‑GGAAAAT‑C‑CG‑G‑G‑‑CGTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 1:3258482/93‑1 (MQ=255) cc‑GGAAAAT‑C‑CG‑G‑G‑‑CTTCGCAGG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:3605119/1‑93 (MQ=255) | TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAAT‑C‑C‑‑T‑G‑‑C‑TCGCAGG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG > NC_000913/3957469‑3957626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |