BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,005,601	+C	coding (237/282 nt)	b4568 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,005,600	1	.	C	98.6%	660.7 / 1.4	210	coding (236/282 nt)	b4568	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (2/1); new base C (122/85); total (124/86)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 228 total aligned reads displayed.

GTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT  >  NC_000913/4005509‑4005686

 tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cc                                                                                      >  1:2758048/1‑92 (MQ=255)

   aTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cctg                                                                                    >  2:40177/1‑90 (MQ=255)

    tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cctgt                                                                                   <  1:3692418/93‑5 (MQ=255)

       tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtc                                                                                 >  2:2731667/1‑93 (MQ=255)

       tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtc                                                                                 <  2:4591410/93‑1 (MQ=255)

         tGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtctc                                                                               <  1:4416891/93‑1 (MQ=255)

         tGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtctc                                                                               <  2:3058129/93‑1 (MQ=255)

          gggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGTCTGGCTGCATACGCTGATTATGGTGGTCGGCGG‑G‑CTGGATctct                                                                              >  2:4487259/1‑93 (MQ=255)

            gCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGAC‑CTGTATCTctgc                                                                            >  2:359421/1‑93 (MQ=255)

            gCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTctgc                                                                            <  2:1942111/93‑1 (MQ=255)

              tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTctgctg                                                                          >  1:1707122/1‑93 (MQ=255)

              tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTctgctg                                                                          <  1:1002317/93‑1 (MQ=255)

               gggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTgg                                                                         <  2:4632469/93‑1 (MQ=255)

                ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGa                                                                        >  1:1651102/1‑93 (MQ=255)

                ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGa                                                                        >  1:321128/1‑93 (MQ=255)

                ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGa                                                                        <  1:4529405/93‑1 (MQ=255)

                ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGAATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGa                                                                        <  1:4314411/93‑1 (MQ=255)

                 gATTGCGCTGCTTGTCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGAt                                                                       <  1:1586664/93‑1 (MQ=255)

                  aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGTTg                                                                      >  1:491787/1‑93 (MQ=255)

                  aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATg                                                                      <  1:2696223/93‑1 (MQ=255)

                   ttGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATgg                                                                     <  2:4113172/93‑1 (MQ=255)

                     gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGt                                                                   <  1:642497/93‑1 (MQ=255)

                       gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTa                                                                 >  2:3156086/1‑93 (MQ=255)

                       gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTa                                                                 >  2:3734096/1‑93 (MQ=255)

                       gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGGTa                                                                 >  2:3011818/1‑93 (MQ=255)

                        ctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTAc                                                                >  1:3036038/1‑93 (MQ=255)

                        ctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTAc                                                                <  1:133345/93‑1 (MQ=255)

                         tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTAcc                                                               >  2:369410/1‑93 (MQ=255)

                           ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAg                                                             >  1:1636543/1‑93 (MQ=255)

                            ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGa                                                            >  1:2100722/1‑93 (MQ=255)

                            ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGa                                                            <  2:110511/93‑1 (MQ=255)

                                ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGATGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAgctgct                                                        >  1:4351681/1‑93 (MQ=255)

                                 cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTa                                                       >  2:1669105/1‑93 (MQ=255)

                                 cTGCATTTGATTATCGAAAAAAAGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCATATGCTa                                                       >  2:698806/1‑93 (MQ=255)

                                  tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                      >  1:1118451/1‑93 (MQ=255)

                                  tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                      >  1:2649228/1‑93 (MQ=255)

                                    cATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgg                                                    >  2:145885/1‑92 (MQ=255)

                                     aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                   >  1:3394862/1‑93 (MQ=255)

                                     aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                   <  1:2568917/93‑1 (MQ=255)

                                     aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                   >  2:4287061/1‑93 (MQ=255)

                                      tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                  <  2:2931835/93‑1 (MQ=255)

                                      tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                  >  2:854012/1‑93 (MQ=255)

                                      tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                  >  1:3995372/1‑93 (MQ=255)

                                       ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggt                                                 <  2:2078848/93‑1 (MQ=255)

                                       ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggt                                                 <  1:2591597/93‑1 (MQ=255)

                                         gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                               <  1:2064118/93‑1 (MQ=255)

                                          aTTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                                              <  2:3260454/93‑1 (MQ=255)

                                          aTTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                                              >  1:4227350/1‑93 (MQ=255)

                                           ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                                             >  1:2048387/1‑93 (MQ=255)

                                           ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                                             >  1:3152473/1‑93 (MQ=255)

                                           ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                                             >  1:638223/1‑93 (MQ=255)

                                            tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                            >  1:2311541/1‑93 (MQ=255)

                                              tCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                          >  1:3533701/1‑93 (MQ=255)

                                              tCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                          >  1:701957/1‑93 (MQ=255)

                                              tCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                          >  1:4069757/1‑93 (MQ=255)

                                               cGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaa                                         >  2:3421150/1‑93 (MQ=255)

                                               cGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaa                                         <  2:1262684/93‑1 (MQ=255)

                                                  aaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaa                                      <  1:3137195/93‑1 (MQ=255)

                                                   aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaaa                                     >  2:1537641/1‑93 (MQ=255)

                                                    aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                    >  1:776222/1‑93 (MQ=255)

                                                     aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAACaga                                   >  1:1487450/1‑93 (MQ=255)

                                                     aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                   <  2:532021/93‑1 (MQ=255)

                                                      aTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                                  <  1:2852546/93‑1 (MQ=255)

                                                        ggCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                <  2:1493065/93‑1 (MQ=255)

                                                          ccTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                              >  1:1266064/1‑93 (MQ=255)

                                                           cTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                             >  1:2971107/1‑93 (MQ=255)

                                                           cTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                             >  1:1499725/1‑93 (MQ=255)

                                                           cTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                             >  1:3492343/1‑93 (MQ=255)

                                                             ggCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                           <  1:74532/93‑1 (MQ=255)

                                                               cTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt                         <  2:2501206/93‑1 (MQ=255)

                                                                 gCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc                       <  1:2400468/93‑1 (MQ=255)

                                                                   aTACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAc                     >  2:1814384/1‑93 (MQ=255)

                                                                    tACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                    <  1:1402481/93‑1 (MQ=255)

                                                                    tACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                    >  1:2369459/1‑93 (MQ=255)

                                                                    tACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTACTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                    >  1:2228199/1‑93 (MQ=255)

                                                                     aCGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                   >  2:2112690/1‑93 (MQ=255)

                                                                      cGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTg                  >  1:975195/1‑93 (MQ=255)

                                                                       gCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGGGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                 >  2:3132276/1‑93 (MQ=255)

                                                                        cTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcg                >  2:3513575/1‑93 (MQ=255)

                                                                         tGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcgc               >  2:2262612/1‑93 (MQ=255)

                                                                          gATTATGGTGGGCGG‑TG‑GCCTGTATTTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGcc              <  2:4150414/93‑1 (MQ=255)

                                                                          gATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGcc              >  2:773909/1‑93 (MQ=255)

                                                                            ttATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac            >  1:2876685/1‑93 (MQ=255)

                                                                            ttATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac            >  1:3771032/1‑93 (MQ=255)

                                                                            ttATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac            >  1:1531829/1‑93 (MQ=255)

                                                                            ttATGGTGGGCGA‑TGTC‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac            <  2:321651/93‑1 (MQ=255)

                                                                             tATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca           <  1:1995210/93‑1 (MQ=255)

                                                                             tATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca           >  2:589254/1‑93 (MQ=255)

                                                                              aTGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg          <  2:1718252/93‑1 (MQ=255)

                                                                              aTGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg          <  1:3577316/93‑1 (MQ=255)

                                                                               tggtggGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg         >  1:4278062/1‑93 (MQ=255)

                                                                               tggtggGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg         >  1:4479676/1‑93 (MQ=255)

                                                                               tggtggGCGG‑GG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg         >  1:3631573/1‑93 (MQ=255)

                                                                                ggtggGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAggc        >  2:2299866/1‑92 (MQ=255)

                                                                                ggtggGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGt        <  1:3588623/93‑1 (MQ=255)

                                                                                ggtggGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGt        <  2:4423123/93‑1 (MQ=255)

                                                                                ggtggGCGG‑TG‑GCCTGTATCTCGGCTGGAGGGGTTCCCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCCCCTGCGCCACAGGt        <  2:619615/93‑1 (MQ=255)

                                                                                 gtggGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc       <  1:3813073/93‑1 (MQ=255)

                                                                                     gCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGc   <  1:2454980/93‑1 (MQ=255)

                                                                                      cGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCt  >  1:219485/1‑93 (MQ=255)

GTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT  >  NC_000913/4005509‑4005686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`