BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,375	+A	coding (458/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,372	1	.	A	100.0%	273.9 / NA	76	S152* (TCA→TAA)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (28/48); total (28/48)

Only 100 of 104 total aligned reads displayed.

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑A‑AAGGCCATGCGCTGGAAG‑GC‑TGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTc                                                                                            >  2:4631955/1‑93 (MQ=255)

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTc                                                                                            <  1:1994492/93‑1 (MQ=255)

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTATCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTc                                                                                            <  1:3275404/93‑1 (MQ=255)

 gtGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a                                                                                          <  1:200043/92‑1 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑a                                                                                        >  2:3949863/1‑93 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑a                                                                                        <  2:4659325/93‑1 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaa                                                                                      <  2:1821693/93‑2 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaa                                                                                      <  2:3637507/93‑2 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaa                                                                                      <  1:2156358/93‑2 (MQ=255)

     aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaag                                                                                     <  1:3369086/93‑3 (MQ=255)

     aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaag                                                                                     <  1:3503979/93‑3 (MQ=255)

     aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaag                                                                                     <  1:1882532/93‑3 (MQ=255)

     aGCAGGCGATTAACGCGCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaag                                                                                     <  2:244867/93‑3 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaaggc                                                                                   <  2:4610130/93‑5 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaaggc                                                                                   <  1:4566620/93‑5 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaaggc                                                                                   <  1:809673/93‑5 (MQ=255)

       cAGGCGATTAACGCTCGTTGGGGCGACCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑a‑aaaggc                                                                                   <  2:1238240/93‑5 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGTGGCG‑TTTCAA‑AAGGCCa                                                                                  <  2:524188/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCa                                                                                  <  1:3255323/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCa                                                                                  <  1:1408664/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCa                                                                                  >  2:378303/1‑93 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCa                                                                                  <  1:1200436/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCGTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCa                                                                                  <  1:1124133/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAGCCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCAt                                                                                 <  1:3398205/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCAt                                                                                 <  2:3494613/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCAt                                                                                 >  1:1336706/1‑93 (MQ=255)

           cGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATg                                                                                <  1:2966608/93‑1 (MQ=255)

            gATTAGCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATgc                                                                               <  1:1649861/93‑1 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGGGTTTTC‑A‑AAGGCCATgc                                                                               >  2:3037406/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCCTgc                                                                               >  2:3768821/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATgc                                                                               >  2:3757164/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATgc                                                                               >  2:2648648/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATgc                                                                               <  2:406433/93‑1 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAAGCCATgc                                                                               >  1:1010122/1‑93 (MQ=255)

             aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATgcg                                                                              >  2:4130012/1‑93 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATgcgc                                                                             <  2:2889403/93‑1 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATgcgc                                                                             <  1:2570759/93‑1 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTTCAA‑AAGGCCATgcgc                                                                             >  2:150626/1‑93 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTTCAA‑AAGGCCATgcgc                                                                             >  2:2867331/1‑93 (MQ=255)

               tAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCt                                                                            >  1:3326041/1‑93 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTg                                                                           <  1:2523393/93‑1 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGGGGCG‑TTTCAA‑AAGGCCCTGCGCTGGa                                                                         >  1:3332752/1‑93 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGaa                                                                        <  2:2364678/93‑1 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGaa                                                                        <  2:1645304/93‑1 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAAGCCATGCGCTTGaa                                                                        >  2:2037370/1‑93 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCCGCG‑TTTCAA‑AAAGCCATGCGCTTGaa                                                                        >  2:4370279/1‑93 (MQ=255)

                    cccGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑ACAAGGCCATGCGCCGGCAg                                                                       >  2:547012/3‑93 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAgc                                                                      <  1:2463423/93‑2 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAAGCCATGCGCTGGAAgc                                                                      >  1:3949962/1‑92 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGGGGCG‑GTTCAA‑AAGGCCATGAGCTGGAAgcgg                                                                    >  2:573336/1‑90 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAgcgg                                                                    <  2:2846331/93‑4 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTTCAA‑AAAGCCATGCGCTGGAAgcgg                                                                    >  1:1683766/1‑90 (MQ=255)

                             gCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGCAGCGG‑TGGCG‑‑‑‑a                                                         >  2:2584046/1‑93 (MQ=255)

                             gCGAGCGCGTCAACGTCAGTTCCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑a                                                         <  1:3422101/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aa                                                        <  1:3182967/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAAGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aa                                                        >  2:1849334/1‑93 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aag                                                       <  1:3581944/93‑2 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aag                                                       <  1:575495/93‑2 (MQ=255)

                               gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aag                                                       >  2:2756240/1‑92 (MQ=255)

                                aTCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aaga                                                      >  2:2283480/1‑91 (MQ=255)

                                aTCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aaga                                                      >  2:2329246/1‑91 (MQ=255)

                                aTCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAAGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aaga                                                      >  1:1052050/1‑91 (MQ=255)

                                  cgcgTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCG‑‑‑‑aagaaa                                                    <  2:2369141/93‑5 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  1:4432993/93‑1 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        >  2:3254248/1‑93 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  1:2592961/93‑1 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  1:3632859/93‑3 (MQ=255)

                                                                    tGGAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                      <  1:3793677/93‑3 (MQ=255)

                                                                     ggAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                     >  1:1240529/1‑90 (MQ=255)

                                                                      gAAGTGATGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttggt                    <  1:1051163/93‑5 (MQ=255)

                                                                      gAAGTGATGGCGGGCGGCG‑GTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttggt                    >  1:3702178/1‑89 (MQ=255)

                                                                            aTGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              <  2:760103/93‑1 (MQ=255)

                                                                            aTGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              <  2:229684/93‑1 (MQ=255)

                                                                            aTGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              >  2:1077404/1‑93 (MQ=255)

                                                                             tGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  1:1566229/93‑1 (MQ=255)

                                                                             tGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  1:1894017/93‑1 (MQ=255)

                                                                             tGGCGGGCGGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  1:3374702/93‑1 (MQ=255)

                                                                              ggcgggcgGCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            <  1:401856/93‑1 (MQ=255)

                                                                              ggcgggcgGCG‑TTTCAA‑AAGGCCATGCGCTGGAAG‑CCGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            <  2:3408020/93‑1 (MQ=255)

                                                                               gcgggcggCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  1:3117785/93‑1 (MQ=255)

                                                                               gcgggcggCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  2:1467147/93‑1 (MQ=255)

                                                                                 gggcggCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa         <  1:4425676/93‑1 (MQ=255)

                                                                                 gggcggCG‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa         <  1:1119358/93‑1 (MQ=255)

                                                                                   gcggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacg       >  1:4457103/1‑93 (MQ=255)

                                                                                    cggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      <  2:3526130/93‑1 (MQ=255)

                                                                                    cggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      >  1:4576177/1‑93 (MQ=255)

                                                                                     ggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     >  2:4523682/1‑93 (MQ=255)

                                                                                     ggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     >  2:516542/1‑93 (MQ=255)

                                                                                     ggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  1:2669860/93‑1 (MQ=255)

                                                                                     ggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  2:4322943/93‑1 (MQ=255)

                                                                                     ggcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  1:2958163/93‑1 (MQ=255)

                                                                                      gcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgggg    >  1:2074904/1‑90 (MQ=255)

                                                                                      gcg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg    >  2:2058391/1‑93 (MQ=255)

                                                                                       cg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc   >  2:4150932/1‑93 (MQ=255)

                                                                                       cg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc   >  1:2192640/1‑93 (MQ=255)

                                                                                       cg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc   <  1:1265185/93‑1 (MQ=255)

                                                                                       cg‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc   <  2:1382101/93‑1 (MQ=255)

                                                                                        g‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  <  2:1470272/93‑1 (MQ=255)

                                                                                        g‑TTTCAA‑AAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  2:1671891/1‑93 (MQ=255)

                                                                                        g‑TTTCAA‑AAGGCCATGCGCAGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  2:4571105/1‑93 (MQ=255)

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTC‑A‑AAGGCCATGCGCTGGAAG‑GC‑TGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`