BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,421	+T	coding (504/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,421	1	.	T	100.0%	359.4 / NA	100	L168F (TTG→TTT)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (50/50); total (50/50)

Only 100 of 101 total aligned reads displayed.

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GC‑TGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCT  >  NC_000913/4008346‑4008503

tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                                                                                   >  2:3254248/1‑93 (MQ=255)

tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                                                                                   <  1:2592961/93‑1 (MQ=255)

tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtt                                                                                   <  1:4432993/93‑1 (MQ=255)

  tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                                                                                 <  1:3632859/93‑3 (MQ=255)

  tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttg                                                                                 <  1:3793677/93‑3 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                                                                                >  1:1240529/1‑90 (MQ=255)

    gAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttggt                                                                               <  1:1051163/93‑5 (MQ=255)

    gAAGTGATGGCGGGCGGCGGTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGtttggt                                                                               >  1:3702178/1‑89 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg                                                                         <  2:760103/93‑1 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg                                                                         <  2:229684/93‑1 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg                                                                         >  2:1077404/1‑93 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa                                                                        <  1:1894017/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa                                                                        <  1:1566229/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa                                                                        <  1:3374702/93‑1 (MQ=255)

            ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt                                                                       <  1:401856/93‑1 (MQ=255)

            ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAG‑CCGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt                                                                       <  2:3408020/93‑1 (MQ=255)

             gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg                                                                      <  2:1467147/93‑1 (MQ=255)

             gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg                                                                      <  1:3117785/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa                                                                    <  1:4425676/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGaa                                                                    <  1:1119358/93‑1 (MQ=255)

                 gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacg                                                                  >  1:4457103/1‑93 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga                                                                 >  1:4576177/1‑93 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga                                                                 <  2:3526130/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac                                                                <  1:2958163/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac                                                                <  2:4322943/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac                                                                <  1:2669860/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac                                                                >  2:516542/1‑93 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac                                                                >  2:4523682/1‑93 (MQ=255)

                    gcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgggg                                                               >  1:2074904/1‑90 (MQ=255)

                    gcgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg                                                               >  2:2058391/1‑93 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc                                                              >  2:4150932/1‑93 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc                                                              <  2:1382101/93‑1 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc                                                              <  1:1265185/93‑1 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc                                                              >  1:2192640/1‑93 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc                                                             <  2:1470272/93‑1 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc                                                             >  2:1671891/1‑93 (MQ=255)

                      gTTTCAAAAGGCCATGCGCAGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc                                                             >  2:4571105/1‑93 (MQ=255)

                          canaaGNNCATGCGCTGGAAG‑NNGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  1:4559497/90‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  1:2234580/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  2:3847674/91‑1 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  2:1013108/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  1:4466518/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  1:2030356/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  2:2669759/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  1:2475525/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAAt                                                        <  2:4362651/92‑1 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATg                                                       >  2:470735/1‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATg                                                       >  1:1050044/1‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATg                                                       >  1:4590471/1‑93 (MQ=255)

                             aaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGc                                                      >  1:3864513/1‑93 (MQ=255)

                             aaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGc                                                      <  2:1078745/93‑1 (MQ=255)

                             aaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGc                                                      <  1:4450069/93‑1 (MQ=255)

                             aaGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGc                                                      <  1:2907437/93‑1 (MQ=255)

                              aGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     <  2:2559408/93‑1 (MQ=255)

                              aGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     >  1:4654945/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     <  1:4631955/93‑1 (MQ=255)

                              aGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     >  2:1507239/1‑93 (MQ=255)

                              aGGCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     <  1:3115899/93‑1 (MQ=255)

                               ggCCATGCGCTGGAAGCGG‑TGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTg                                                    <  2:3964472/93‑1 (MQ=255)

                                                              ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGc                   <  2:2551572/90‑1 (MQ=255)

                                                              ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGc                   >  2:2827746/4‑93 (MQ=255)

                                                               tgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCa                  >  1:1030894/3‑93 (MQ=255)

                                                               tgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCa                  <  1:3975408/91‑1 (MQ=255)

                                                                gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAg                 <  2:4494890/92‑1 (MQ=255)

                                                                gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAg                 <  2:483481/92‑1 (MQ=255)

                                                                gggCTACAGCCTGAAGGATTGTATTGCGTTTGGCGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAg                 >  2:4215796/2‑93 (MQ=255)

                                                                 ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGt                <  1:2506546/93‑1 (MQ=255)

                                                                 ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGt                >  2:3217413/1‑93 (MQ=255)

                                                                 ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGt                >  2:2396445/1‑93 (MQ=255)

                                                                   cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgc              <  1:3340585/93‑2 (MQ=255)

                                                                   cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgc              >  1:2035757/1‑92 (MQ=255)

                                                                   cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgc              <  2:2953294/93‑2 (MQ=255)

                                                                    tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg             >  2:2407127/1‑91 (MQ=255)

                                                                    tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg             >  1:689379/1‑91 (MQ=255)

                                                                    tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg             >  2:2696585/1‑91 (MQ=255)

                                                                    tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTgcg             >  1:1686572/1‑91 (MQ=255)

                                                                        gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCgcacc         >  2:4246988/3‑93 (MQ=255)

                                                                        gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCgcacc         >  2:4074519/3‑93 (MQ=255)

                                                                        gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCgcacc         >  1:4332377/3‑93 (MQ=255)

                                                                         ccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCgcaccg        >  1:750969/2‑92 (MQ=255)

                                                                          cTGAAGGATTGTATTGCGTTTGGTGACGGGGTGAACGGCGCCGTAATGCTGTCGAAGGCGGGG‑‑AAA‑GCCTGCATTATGGGCAGGGGGTACCAg       >  2:1076668/1‑93 (MQ=255)

                                                                          cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAg       <  1:3892728/93‑1 (MQ=255)

                                                                          cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAg       >  1:1192872/1‑93 (MQ=255)

                                                                          cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAg       <  1:960598/93‑1 (MQ=255)

                                                                           tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGc      <  1:2756240/93‑1 (MQ=255)

                                                                           tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGc      >  1:1246741/1‑93 (MQ=255)

                                                                           tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGc      >  1:336362/1‑93 (MQ=255)

                                                                            gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCg     >  2:4258583/1‑93 (MQ=255)

                                                                            gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCg     >  2:1980376/1‑93 (MQ=255)

                                                                            gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGTAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCg     >  2:3586240/1‑93 (MQ=255)

                                                                             aaGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGt    <  2:1341619/93‑1 (MQ=255)

                                                                              aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc   >  2:1623503/1‑93 (MQ=255)

                                                                              aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc   >  2:2104761/1‑93 (MQ=255)

                                                                              aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc   <  2:4469741/93‑1 (MQ=255)

                                                                              aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc   <  1:2805984/93‑1 (MQ=255)

                                                                              aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc   <  2:3541119/93‑1 (MQ=255)

                                                                              aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc   <  2:1727104/93‑1 (MQ=255)

                                                                               ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCt  <  1:4531157/93‑1 (MQ=255)

                                                                               ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCt  >  2:4164986/1‑93 (MQ=255)

                                                                               ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCt  >  2:399184/1‑93 (MQ=255)

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GC‑TGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCT  >  NC_000913/4008346‑4008503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`