| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,469 | +G | intergenic (+36/‑197) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,466 | 1 | . | G | 97.6% | 379.3 / 1.5 | 124 | intergenic (+33/‑200) | b4555/yigM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base G (55/66); total (57/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
ACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGC‑GGG‑‑AAA‑‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑GAAGTGATTGGTACTAATGCCGACGAC > NC_000913/4008400‑4008551 | ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGc > 2:2827746/4‑93 (MQ=255)ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGc < 2:2551572/90‑1 (MQ=255) tgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCa > 1:1030894/3‑93 (MQ=255) tgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCa < 1:3975408/91‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAg < 2:826713/92‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAg < 2:4494890/92‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAg < 2:483481/92‑1 (MQ=255) ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGt < 1:2506546/93‑1 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTgc < 1:3340585/93‑2 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTgc < 2:2953294/93‑2 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTgcg > 1:1686572/1‑91 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTgcg > 2:2407127/1‑91 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTgcg > 1:689379/1‑91 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTgcg > 2:2696585/1‑91 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCgcacc > 2:4246988/3‑93 (MQ=255) ccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCgcaccg > 1:750969/2‑92 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAg < 1:3892728/93‑1 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAg < 1:960598/93‑1 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAg > 1:1192872/1‑93 (MQ=255) tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGc < 1:2756240/93‑1 (MQ=255) tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGc > 1:1246741/1‑93 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCg > 2:1980376/1‑93 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCg > 2:4258583/1‑93 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGC‑GGGGTAAG‑‑GCTGCATTATGGGCAGTGCGCACCAGCg > 2:3586240/1‑93 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc > 2:2104761/1‑93 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc > 2:1623503/1‑93 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc < 2:1727104/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc < 2:4469741/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc < 2:3541119/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc < 1:2805984/93‑1 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCt > 2:399184/1‑93 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCt > 2:4164986/1‑93 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCt < 1:4531157/93‑1 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt > 2:2660699/5‑93 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt > 2:1121649/5‑93 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 2:3075612/91‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 2:2683642/91‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc > 2:1871860/3‑93 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 1:1450524/91‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa < 1:1791295/93‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa > 1:81779/1‑93 (MQ=255) ggACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa < 1:2233640/92‑1 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg > 2:3324421/1‑93 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑c < 2:110176/93‑1 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑g < 1:1271192/93‑1 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑g > 2:4670876/1‑93 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gg < 2:1252333/93‑2 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gg > 1:1064987/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gg > 1:4165025/1‑92 (MQ=255) gATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gga < 1:3208493/93‑3 (MQ=255) tGAACGACGCGGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag < 1:3075847/93‑5 (MQ=255) tGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag < 2:788028/93‑5 (MQ=255) tGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag < 2:3992017/93‑5 (MQ=255) tGAACGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag < 1:3060309/93‑5 (MQ=255) aaCGACGCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTg < 1:3223860/93‑1 (MQ=255) acgacgCCGAGATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa < 1:451557/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa < 1:1118114/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa < 2:4116374/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa > 2:2467002/1‑93 (MQ=255) cgacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAt < 2:3949962/93‑1 (MQ=255) gccgcgGAAATGCTGTCGATGGGG‑GGG‑‑AAAG‑GCTGCAGTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 2:202191/91‑1 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 2:103893/93‑1 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt > 2:4158913/1‑93 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt > 2:2223405/1‑93 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 2:1314234/93‑1 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 1:4441255/93‑1 (MQ=255) acgCCGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTg > 2:3987726/1‑93 (MQ=255) acgCCGAAATGCTCTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTg < 1:2678236/93‑1 (MQ=255) cGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTAc > 1:1390274/1‑93 (MQ=255) cGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTAc > 1:4173572/1‑93 (MQ=255) cGAAATGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTAc > 2:196956/1‑93 (MQ=255) gAAATGCTGTCGCT‑GGC‑GGG‑‑AAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCCC‑GCAGTGATTGGTACt > 2:841908/1‑93 (MQ=255) gAAATGCTGGCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGAACTTCATCCCGAG‑CTGGAAGGGATTGGTACt > 1:2236980/1‑93 (MQ=255) aaaTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTa > 1:1807128/1‑93 (MQ=255) aaaTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTa > 2:4089899/1‑93 (MQ=255) aaTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 1:3768821/93‑1 (MQ=255) aaTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 1:890759/93‑1 (MQ=255) aaTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa > 1:3391435/1‑93 (MQ=255) aaTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 2:2098657/93‑1 (MQ=255) aaTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa > 1:2327810/1‑93 (MQ=255) aTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAAt > 2:3008086/1‑93 (MQ=255) aTGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAAt > 1:2632541/1‑93 (MQ=255) tGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATg > 1:2107200/1‑93 (MQ=255) tGCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATg < 1:356852/93‑1 (MQ=255) gCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGc < 2:2580693/93‑1 (MQ=255) gCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGc > 1:3024996/1‑93 (MQ=255) gCTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGc > 2:3400004/1‑93 (MQ=255) cTGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGGGCACCAGCGTCTGAAAGACCTTCATACCGAG‑CTGGAAGGGATTGGTACTTATGcc > 1:3128615/1‑93 (MQ=255) tGTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcg > 1:1690261/1‑93 (MQ=255) gTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGTAGTGATTGGTACTAATGCcga > 1:920091/1‑93 (MQ=255) gTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga < 1:2055819/93‑1 (MQ=255) gTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga < 2:1568400/93‑1 (MQ=255) gTCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga < 1:3254248/93‑1 (MQ=255) tCGAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcgac < 1:4613932/93‑1 (MQ=255) gAT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcgacga < 1:2502888/93‑1 (MQ=255) aT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGTCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 2:1479920/93‑1 (MQ=255) aT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGGGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac > 2:430081/1‑93 (MQ=255) aT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 2:4315304/93‑1 (MQ=255) aT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 2:2255970/93‑1 (MQ=255) aT‑GGCGGGG‑‑AAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 1:3757164/93‑1 (MQ=255) | ACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGC‑GGG‑‑AAA‑‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑GAAGTGATTGGTACTAATGCCGACGAC > NC_000913/4008400‑4008551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |