| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,473 | +G | intergenic (+40/‑193) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,472 | 1 | . | G | 99.3% | 430.1 / ‑3.8 | 140 | intergenic (+39/‑194) | b4555/yigM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (61/78); total (62/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
ACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGC‑GGGAAA‑‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGC > NC_000913/4008400‑4008558 | ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGc < 2:2551572/90‑1 (MQ=255) tgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCa > 1:1030894/3‑93 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAg < 2:826713/92‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAg < 2:483481/92‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAg < 2:4494890/92‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGCGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAg > 2:4215796/2‑93 (MQ=255) ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGt < 1:2506546/93‑1 (MQ=255) ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGt > 2:3217413/1‑93 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTgc < 1:3340585/93‑2 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTgc < 2:2953294/93‑2 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTgc > 1:2035757/1‑92 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTgcg > 1:689379/1‑91 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTgcg > 2:2407127/1‑91 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTgcg > 2:2696585/1‑91 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCgcacc > 1:4332377/3‑93 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCgcacc > 2:4246988/3‑93 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCgcacc > 2:4074519/3‑93 (MQ=255) ccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCgcaccg > 1:750969/2‑92 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAg < 1:3892728/93‑1 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAg < 1:960598/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc < 1:2805984/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc < 2:3541119/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTc < 2:1727104/93‑1 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCt > 2:399184/1‑93 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCt < 1:4531157/93‑1 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt > 2:1121649/5‑93 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCCGCATTATGGGAAGTGCGCACCACCGTCTGAAAGGCCTTCAt < 2:2832462/89‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 2:3075612/91‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc > 2:1871860/3‑93 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 1:1450524/91‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 2:2683642/91‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa < 1:1791295/93‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa > 1:81779/1‑93 (MQ=255) ggACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa < 1:2233640/92‑1 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg > 2:3324421/1‑93 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑c < 2:110176/93‑1 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑g < 1:1271192/93‑1 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gg > 2:3679479/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gg > 1:1064987/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gg > 1:4165025/1‑92 (MQ=255) gATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gga < 1:3208493/93‑3 (MQ=255) gATGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gga < 1:1244152/93‑3 (MQ=255) aTGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaa < 2:439256/93‑4 (MQ=255) aTGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaa < 1:2648648/93‑4 (MQ=255) tGAACGACGCGGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag < 1:3075847/93‑5 (MQ=255) tGAACGACGCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag < 2:3992017/93‑5 (MQ=255) acgacgCCGAGATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa < 1:451557/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa < 1:1118114/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa > 2:2467002/1‑93 (MQ=255) acgacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa < 2:4116374/93‑1 (MQ=255) cgacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAt < 2:3949962/93‑1 (MQ=255) gccgcgGAAATGCTGTCGATGGGG‑GGGAAAG‑GCTGCAGTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 2:202191/91‑1 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 2:103893/93‑1 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt > 2:4158913/1‑93 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 2:1314234/93‑1 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 1:4441255/93‑1 (MQ=255) gacgCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt > 2:2223405/1‑93 (MQ=255) acgCCGAAATGCTCTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTg < 1:2678236/93‑1 (MQ=255) gCCGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGt < 2:507341/93‑1 (MQ=255) cGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTAc < 1:2277134/93‑1 (MQ=255) cGAAATGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTAc > 2:196956/1‑93 (MQ=255) gAAATGCTGTCGCT‑GGC‑GGGAAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCCC‑GCAGTGATTGGTACt > 2:841908/1‑93 (MQ=255) gAAATGCTGGCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGAACTTCATCCCGAG‑CTGGAAGGGATTGGTACt > 1:2236980/1‑93 (MQ=255) aaTGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 1:890759/93‑1 (MQ=255) aaTGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa > 1:3391435/1‑93 (MQ=255) aaTGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 1:3768821/93‑1 (MQ=255) aaTGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 1:3037406/93‑1 (MQ=255) aaTGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 2:2085270/93‑1 (MQ=255) aaTGCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 2:2098657/93‑1 (MQ=255) gCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGc < 2:2580693/93‑1 (MQ=255) gCTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGc > 1:3024996/1‑93 (MQ=255) cTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGGGCACCAGCGTCTGAAAGACCTTCATACCGAG‑CTGGAAGGGATTGGTACTTATGcc > 1:3128615/1‑93 (MQ=255) cTGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGcc < 1:1463743/93‑1 (MQ=255) tGTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcg > 1:1690261/1‑93 (MQ=255) gTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGTAGTGATTGGTACTAATGCcga > 1:920091/1‑93 (MQ=255) gTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga < 1:3254248/93‑1 (MQ=255) gTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga < 1:2055819/93‑1 (MQ=255) gTCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga < 2:1568400/93‑1 (MQ=255) tCGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcgac < 1:4613932/93‑1 (MQ=255) cGAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcgacg < 1:378303/93‑1 (MQ=255) gAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcgacga < 1:2502888/93‑1 (MQ=255) gAT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcgacga < 2:2638556/93‑1 (MQ=255) aT‑GGCGGGGAAAG‑GCTGCATTATGGTCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 2:1479920/93‑1 (MQ=255) aT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGGGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac > 2:430081/1‑93 (MQ=255) aT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 2:2255970/93‑1 (MQ=255) aT‑GGCGGGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 2:4315304/93‑1 (MQ=255) ggcggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgc < 1:3225253/89‑1 (MQ=255) gcggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgcg > 1:4103495/4‑93 (MQ=255) gcggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgcg < 1:1307376/90‑1 (MQ=255) gcggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgcg > 1:1452411/4‑93 (MQ=255) gcggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgcg < 2:1336706/90‑1 (MQ=255) cggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCgg < 2:4654945/91‑1 (MQ=255) cggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCgg < 1:1228176/91‑1 (MQ=255) ggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCggg > 1:338655/2‑92 (MQ=255) ggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 1:3579281/92‑1 (MQ=255) ggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 2:3511676/92‑1 (MQ=255) ggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGt > 1:3730473/2‑93 (MQ=255) ggggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 1:3202892/92‑1 (MQ=255) ggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc > 2:1520282/1‑93 (MQ=255) ggAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc > 2:1678308/1‑93 (MQ=255) | ACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGAT‑GGC‑GGGAAA‑‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGC > NC_000913/4008400‑4008558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |