BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	541,457	(G)_5→6	coding (346/1146 nt)	ybbZ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	541,452	1	.	G	100.0%	424.5 / NA	135	T114R (ACG→AGG)	ybbZ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (51/84); total (51/84)

Only 100 of 157 total aligned reads displayed.

AAACGGCGGTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTAC‑GGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGACGGCGGTA  >  NC_000913/541362‑541538

aaaCGGCGGTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTAC‑gg                                                                                      >  2:820708/1‑93 (MQ=255)

     gcggTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTAC‑ggggggg                                                                                 >  2:3247106/1‑91 (MQ=255)

     gcggTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTAC‑gggggga                                                                                 >  1:3465947/1‑91 (MQ=255)

     gcggTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTAC‑gggggga                                                                                 <  1:3139022/93‑3 (MQ=255)

      cggTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTAC‑ggggggag                                                                                <  2:1159276/93‑4 (MQ=255)

          gATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTaa                                                                             >  2:3611573/1‑93 (MQ=255)

          gATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTaa                                                                             <  2:2971513/93‑1 (MQ=255)

           aTTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAAt                                                                            >  1:3136886/1‑93 (MQ=255)

           aTTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTCAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAAt                                                                            >  1:2518538/1‑93 (MQ=255)

            ttGAGATGGCGTCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAAtt                                                                           <  2:1434113/93‑1 (MQ=255)

            ttGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAAtt                                                                           <  2:3274417/93‑1 (MQ=255)

             tGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTc                                                                          <  2:1973510/93‑1 (MQ=255)

               agaTGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGt                                                                        <  2:2559896/93‑1 (MQ=255)

                gaTGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTc                                                                       >  1:2846402/1‑93 (MQ=255)

                gaTGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTc                                                                       >  1:4304775/1‑93 (MQ=255)

                gaTGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTc                                                                       <  1:821056/93‑1 (MQ=255)

                  tGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCAt                                                                     <  1:4187687/93‑1 (MQ=255)

                  tGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCAt                                                                     <  1:664221/93‑1 (MQ=255)

                  tGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCAt                                                                     <  1:3549918/93‑1 (MQ=255)

                      ggcAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATgcgc                                                                 <  1:1357442/93‑1 (MQ=255)

                       gcagcaAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCt                                                                <  2:2181617/93‑1 (MQ=255)

                       gcagcaAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCt                                                                >  2:1592527/1‑93 (MQ=255)

                        cagcaAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTg                                                               <  2:235457/93‑1 (MQ=255)

                          gcaAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGa                                                             <  2:1826796/93‑1 (MQ=255)

                          gcaAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGa                                                             >  2:946890/1‑93 (MQ=255)

                           caAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGAt                                                            <  1:4370517/93‑1 (MQ=255)

                             aGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGAtca                                                          >  2:2066808/1‑91 (MQ=255)

                             aGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATaa                                                          <  2:1602363/93‑1 (MQ=255)

                             aGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATaa                                                          <  2:4371741/93‑1 (MQ=255)

                             aGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATaa                                                          <  2:793121/93‑1 (MQ=255)

                             aGTGGCCTGATGCGGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATaa                                                          <  2:4286253/93‑1 (MQ=255)

                              gTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAAc                                                         <  1:1085442/93‑1 (MQ=255)

                              gTGGCCTGATGCTGGGCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAAc                                                         <  1:418492/93‑1 (MQ=255)

                                  ccTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACa                                                     <  1:3650032/93‑1 (MQ=255)

                                  ccTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACa                                                     <  2:1318200/93‑1 (MQ=255)

                                  ccTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACa                                                     <  1:3422090/93‑1 (MQ=255)

                                   cTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACAt                                                    <  2:4047091/93‑1 (MQ=255)

                                   cTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACAt                                                    >  1:2934934/1‑93 (MQ=255)

                                   cTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACAt                                                    >  2:1172113/1‑93 (MQ=255)

                                   cTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACAt                                                    <  1:474778/93‑1 (MQ=255)

                                   cTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGCACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACAt                                                    >  1:3606365/1‑93 (MQ=255)

                                    tGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACAtt                                                   <  2:2723906/93‑1 (MQ=255)

                                     gATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTc                                                  <  1:871101/93‑1 (MQ=255)

                                       tGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGc                                                <  2:1655433/93‑1 (MQ=255)

                                           ggTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCata                                            <  1:1499242/93‑1 (MQ=255)

                                              cgcgCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCAtatta                                         <  1:1901423/93‑1 (MQ=255)

                                               gcgcCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCAtattat                                        <  2:4675123/93‑1 (MQ=255)

                                                cgcCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATattatt                                       >  2:2452068/1‑93 (MQ=255)

                                                 gcCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGGTAATTCGTCATGCGCTGGATAACGACATTCGCCATattattt                                      >  1:603743/1‑92 (MQ=255)

                                                   cTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATtctc                                    >  1:1294108/1‑93 (MQ=255)

                                                    tGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCg                                   <  1:327043/93‑1 (MQ=255)

                                                    tGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCg                                   <  2:1402831/93‑1 (MQ=255)

                                                       aaaGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGGGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGct                                >  2:2343851/1‑92 (MQ=255)

                                                       aaaGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCa                                <  1:3307898/93‑1 (MQ=255)

                                                       aaaGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCa                                <  1:785014/93‑1 (MQ=255)

                                                       aaaGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCa                                >  1:1660302/1‑93 (MQ=255)

                                                        aaGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCAt                               <  2:2916729/93‑1 (MQ=255)

                                                        aaGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCAt                               >  1:570890/1‑93 (MQ=255)

                                                        aaGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCAt                               >  2:1413315/1‑93 (MQ=255)

                                                         aGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCAtt                              <  1:3530379/93‑1 (MQ=255)

                                                         aGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCAtt                              <  2:2133367/93‑1 (MQ=255)

                                                          gCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTg                             <  2:3576121/93‑1 (MQ=255)

                                                          gCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTg                             <  1:1974205/93‑1 (MQ=255)

                                                          gCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTg                             >  2:3372059/1‑93 (MQ=255)

                                                          gCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTg                             <  1:1070590/93‑1 (MQ=255)

                                                          gCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTg                             >  2:565640/1‑93 (MQ=255)

                                                          gCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTg                             <  1:1434074/93‑1 (MQ=255)

                                                            gTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTggc                           <  2:1207271/93‑1 (MQ=255)

                                                            gTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTggc                           >  1:1926369/1‑93 (MQ=255)

                                                             tAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTggcg                          <  2:4564085/93‑1 (MQ=255)

                                                             tAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTggcg                          >  2:4045019/1‑93 (MQ=255)

                                                              aaTCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTggcgg                         >  1:3896035/1‑93 (MQ=255)

                                                               aTCCGTTGCTGGCCTCCAGTTTTGGTCCGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGCCATTggcggt                        >  2:572657/1‑92 (MQ=255)

                                                                tCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCa                       <  2:257469/93‑1 (MQ=255)

                                                                tCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCa                       >  2:2236470/1‑93 (MQ=255)

                                                                 ccGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAg                      <  2:2737089/93‑1 (MQ=255)

                                                                  cGTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGt                     <  1:3896539/93‑1 (MQ=255)

                                                                   gTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTg                    <  1:1250670/93‑1 (MQ=255)

                                                                   gTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTg                    <  1:1577487/93‑1 (MQ=255)

                                                                   gTTGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTg                    <  2:4624420/93‑1 (MQ=255)

                                                                    ttGCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGc                   <  1:4513972/93‑1 (MQ=255)

                                                                    ttGCTGGCCTCCAGTTTTGGTACGGGGGGAGGTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTAGGCATTGGCGGCAGTGc                   >  1:369362/1‑93 (MQ=255)

                                                                      gCTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGa                 >  1:2963954/1‑93 (MQ=255)

                                                                       cTGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGAc                <  1:1731627/93‑1 (MQ=255)

                                                                        tGGCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTTGCCATATTATTCTCGGCATTGGCGGCAGTGCGACg               >  2:3826903/1‑93 (MQ=255)

                                                                         ggCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACgg              >  1:543959/1‑93 (MQ=255)

                                                                         ggCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACgg              <  2:4395838/93‑1 (MQ=255)

                                                                         agCCTCCAGCTTTGGTACGGGGGGAGATAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGCGCGACgg              >  2:3420734/2‑93 (MQ=255)

                                                                          gCCTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGt             <  1:2056297/93‑1 (MQ=255)

                                                                           ccgccAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTc            <  1:2175642/90‑1 (MQ=255)

                                                                            cTCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCg           <  2:3265521/93‑1 (MQ=255)

                                                                             tCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCgc          >  1:4580678/1‑92 (MQ=255)

                                                                             tCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGa          >  1:2429252/1‑93 (MQ=255)

                                                                             tCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGa          >  2:2165747/1‑93 (MQ=255)

                                                                             tCCAGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGa          <  1:4117501/93‑1 (MQ=255)

                                                                                aGTTTTGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGAcgg       >  1:237254/1‑93 (MQ=255)

                                                                                  ttttGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGAcggcg     >  2:4072562/1‑93 (MQ=255)

                                                                                     tGGTACGGGGGGAGTTAATTCGTGATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGACGGCGGTa  <  1:3083400/93‑1 (MQ=255)

                                                                                     tGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGACGGCGGTa  <  2:1750872/93‑1 (MQ=255)

                                                                                     tGGTACGGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGACGGCGGTa  <  1:2867989/93‑1 (MQ=255)

AAACGGCGGTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTAC‑GGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGACGGCGGTA  >  NC_000913/541362‑541538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`