| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,980,940 | +C | coding (1/363 nt) coding (627/627 nt) |
araH ← araH ← |
ABC‑type arabinose transport system permease component ABC‑type arabinose transport system permease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,980,939 | 1 | . | C | 99.3% | 418.8 / ‑3.9 | 137 | coding (2/363 nt) | araH | ABC‑type arabinose transport system permease component |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (68/68); total (68/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 150 total aligned reads displayed.
CAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GG‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGG > NC_000913/1980848‑1981025 | cAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GG‑c < 1:4074568/93‑1 (MQ=255) ataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GG‑cctct > 1:2580021/1‑89 (MQ=255) ataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GG‑cctct < 2:881895/93‑5 (MQ=255) tCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGtt > 1:3738743/1‑93 (MQ=255) cgtcTATCGCAGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCCCCAGACGCGCTGC‑C‑TCTTCGTTcc < 2:736155/90‑1 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTcc > 2:418619/1‑93 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTcc < 2:2781526/93‑1 (MQ=255) cTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGc > 2:3402516/1‑93 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGcc > 1:3068568/1‑93 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGcc > 1:2929245/1‑93 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGcc > 1:3742499/1‑93 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGcc > 2:4472196/1‑93 (MQ=255) tCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCaa < 1:3342360/93‑1 (MQ=255) tCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCaa > 1:2332326/1‑93 (MQ=255) cGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACCCCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAAt < 1:1165157/93‑1 (MQ=255) cTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCg > 1:1443310/1‑93 (MQ=255) cTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCg < 2:4313387/93‑1 (MQ=255) cTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCg > 2:3973603/1‑93 (MQ=255) tGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGc > 1:3890444/1‑93 (MQ=255) tGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGc > 1:1997181/1‑93 (MQ=255) gATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGcc < 1:3199007/93‑1 (MQ=255) gATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGcc < 1:2419647/93‑1 (MQ=255) gATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGcc > 2:909935/1‑93 (MQ=255) gtACCCGGCCTGAGAGAACAAACATAATAATTTTGGTGCGAACAACCGGTACCCCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCa < 1:893369/92‑1 (MQ=255) aTACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCa < 1:3478217/93‑1 (MQ=255) aTACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCa < 1:2967231/93‑1 (MQ=255) tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAg < 1:4654343/93‑1 (MQ=255) tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAg > 2:2172006/1‑93 (MQ=255) cAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGgt < 2:470330/93‑1 (MQ=255) aGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGgtg < 1:1001250/93‑1 (MQ=255) ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAAACGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTa > 2:1618499/1‑93 (MQ=255) cTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTAc > 2:3731351/1‑93 (MQ=255) cTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTAc > 2:3030929/1‑93 (MQ=255) tGAGAGAACAAAGATAATACTTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACg > 2:4568657/1‑93 (MQ=255) gagagaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGa < 1:2753146/93‑1 (MQ=255) agagaACAAAGATAATAATTTGGGTGCGAACAACCGGTACCCCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAc < 1:146342/93‑1 (MQ=255) gagaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAcc < 2:2381058/93‑1 (MQ=255) agaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCa > 1:3667853/1‑93 (MQ=255) gaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaa > 1:3956296/1‑93 (MQ=255) gaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaa > 2:2627057/1‑93 (MQ=255) aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaaa > 2:1802664/1‑93 (MQ=255) aCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAg < 2:1214132/93‑1 (MQ=255) cAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg < 1:2766697/93‑1 (MQ=255) aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt > 1:1570020/1‑93 (MQ=255) aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg > 1:3609064/1‑93 (MQ=255) aGATAATAATTTTGGTGCGAACAACCGTGACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtgg < 1:1745663/93‑1 (MQ=255) aGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtgg < 2:4212087/93‑1 (MQ=255) aataataATTTTGGTGCGAACACCCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt < 2:4178037/92‑1 (MQ=255) ataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtt < 1:4143439/93‑1 (MQ=255) ataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtt > 1:2460969/1‑93 (MQ=255) ataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtt < 1:337186/93‑1 (MQ=255) taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGttt > 2:1319850/1‑93 (MQ=255) taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGttt > 2:2339942/1‑93 (MQ=255) ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa > 1:2669163/1‑93 (MQ=255) ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa < 2:2273541/93‑1 (MQ=255) taatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAt < 1:432059/93‑1 (MQ=255) aatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAtt < 1:2800602/93‑1 (MQ=255) atTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc > 1:559924/1‑93 (MQ=255) atTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc < 2:1203014/93‑1 (MQ=255) ttttGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca > 2:925570/1‑93 (MQ=255) tttGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcag < 2:2866214/93‑1 (MQ=255) ttGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GG‑CATCTTCGTTCCCGCCAATCGCCAGGGTGTTTCGACCAAAGGTGGTCTTATTcagc > 2:2819013/1‑93 (MQ=255) tGGTGCGAACAACCGGTACCCCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 1:1153988/93‑1 (MQ=255) tGGTGCGAACAACCGGTACCCCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 2:185959/93‑1 (MQ=255) tGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 2:4069952/93‑1 (MQ=255) tGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca > 1:3893974/1‑93 (MQ=255) tGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 2:3587891/93‑1 (MQ=255) ggTGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagcag > 1:1020281/1‑93 (MQ=255) tGCGAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAgcagca < 2:3536231/93‑1 (MQ=255) tcGAACAACCGGTACCCCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCaa < 2:2240275/92‑1 (MQ=255) cGAACAACCGGTACCCCCGCCAGCCGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCaaa < 2:3797119/93‑1 (MQ=255) gAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAc > 1:1602422/1‑93 (MQ=255) gAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAc < 1:1790092/93‑1 (MQ=255) gAACAACCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAc > 1:3674396/1‑93 (MQ=255) aacaacCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAcc < 1:4204482/93‑1 (MQ=255) acccGGTCCCCCCGCCAGACGCGC‑GGCC‑TCTTCGTGCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaaa < 2:1696535/91‑1 (MQ=255) aacCGGTCCACCCGCCACACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaaa < 2:2392108/93‑1 (MQ=255) aacCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaaa < 2:2100036/93‑1 (MQ=255) acCGGTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAg > 2:3753955/1‑93 (MQ=255) ggTCCACCCGGCAGACGCGC‑GGCC‑TTTTGGTTCCCGCGAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATa < 1:2466181/93‑1 (MQ=255) ggTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATa < 1:3170424/93‑1 (MQ=255) gTACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGACAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATaa > 1:2516486/1‑93 (MQ=255) tACACCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAAt < 1:3957526/93‑1 (MQ=255) acacCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATc < 2:4529834/93‑1 (MQ=255) cacCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa < 1:3070484/93‑1 (MQ=255) cacCCGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa < 2:1700393/93‑1 (MQ=255) cacCCCCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa < 2:145234/93‑1 (MQ=255) ccGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac < 2:2408089/93‑1 (MQ=255) ccGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac > 1:1519490/1‑93 (MQ=255) ccGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGCTTTATTCAGCAGCAAACCAAAGATAATCCGac > 2:48102/1‑93 (MQ=255) cGCCAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGaca < 2:1574984/93‑1 (MQ=255) cAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcgc < 1:2126823/93‑1 (MQ=255) cAGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcgc > 1:4551195/1‑93 (MQ=255) aGACGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcgcg > 1:4085326/1‑93 (MQ=255) aCGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc < 2:2066806/93‑1 (MQ=255) aCGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc < 2:1158274/93‑1 (MQ=255) aCGCGC‑GGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc < 1:1375814/93‑1 (MQ=255) cgcgc‑gGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACg > 2:2664093/1‑93 (MQ=255) gcgc‑gGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACgg > 2:4467742/1‑93 (MQ=255) gcgc‑gGCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACgg > 2:1842048/1‑93 (MQ=255) | CAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGC‑GG‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGG > NC_000913/1980848‑1981025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |