BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,231,505	(T)_6→7	coding (608/720 nt)	sanA →	vancomycin sensitivity

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,231,499	1	.	T	100.0%	299.4 / NA	85	R201L (CGT→CTT)	sanA	vancomycin sensitivity
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (47/38); total (47/38)

Only 100 of 102 total aligned reads displayed.

GTCACCGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑TTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTT  >  NC_000913/2231407‑2231586

gTCACCGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACcgcg                                                                                          >  2:2656787/1‑93 (MQ=255)

   aCCGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑ttt                                                                                      >  1:3792296/1‑93 (MQ=255)

    ccGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑tttt                                                                                     >  2:2847102/1‑93 (MQ=255)

    ccGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑cttt                                                                                     >  1:1054152/1‑93 (MQ=255)

     cGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑ttttt                                                                                    >  1:559702/1‑93 (MQ=255)

     cGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑ttttt                                                                                    <  1:3059720/93‑1 (MQ=255)

      gAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑tttttt                                                                                   <  1:1175134/93‑1 (MQ=255)

       aaaGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑ttttttt                                                                                  >  1:3838624/1‑92 (MQ=255)

        aaGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑ttttttta                                                                                 <  2:2414387/93‑3 (MQ=255)

        aaGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTCAACCGCG‑atttttta                                                                                 >  1:4001222/1‑91 (MQ=255)

         aGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑tttttttag                                                                                >  1:1829511/1‑90 (MQ=255)

         aGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑tttttttag                                                                                <  2:2854323/93‑4 (MQ=255)

          gATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑tttttttagg                                                                               >  2:2945728/1‑89 (MQ=255)

          gATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑tttttttagg                                                                               <  2:2111982/93‑5 (MQ=255)

          gATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑tttttttagg                                                                               >  1:2044465/1‑89 (MQ=255)

            tatGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGc                                                                              <  1:1939410/93‑1 (MQ=255)

            tatGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGc                                                                              <  2:3323985/93‑1 (MQ=255)

            tatGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGc                                                                              >  1:1903523/1‑93 (MQ=255)

            tatGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGc                                                                              >  2:1928940/1‑93 (MQ=255)

             atGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGcc                                                                             >  2:4247658/1‑93 (MQ=255)

               gCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGc                                                                           >  1:2721820/1‑93 (MQ=255)

                cTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCt                                                                          >  1:737785/1‑93 (MQ=255)

                 tGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTg                                                                         >  2:2629771/1‑93 (MQ=255)

                 tGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTg                                                                         >  1:2662548/1‑93 (MQ=255)

                 tGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTg                                                                         >  1:1768226/1‑93 (MQ=255)

                     aGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTcc                                                                     >  2:2872474/1‑93 (MQ=255)

                      gTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTccc                                                                    >  1:3009162/1‑93 (MQ=255)

                        aCGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTcccca                                                                  >  1:1850871/1‑91 (MQ=255)

                        aCGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTa                                                                  <  1:1357955/93‑1 (MQ=255)

                        aCGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTa                                                                  <  2:474717/93‑1 (MQ=255)

                        aCGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTa                                                                  <  1:3638461/93‑1 (MQ=255)

                         cGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTAt                                                                 >  2:2159992/1‑93 (MQ=255)

                         cGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTAt                                                                 <  2:1073093/93‑1 (MQ=255)

                         cGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTAt                                                                 <  2:1073092/93‑1 (MQ=255)

                         cGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTAt                                                                 >  1:2162384/1‑93 (MQ=255)

                           tATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTc                                                               <  1:3802224/93‑1 (MQ=255)

                           tATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTc                                                               >  2:4512323/1‑93 (MQ=255)

                           tATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTc                                                               >  2:3051559/1‑93 (MQ=255)

                           tATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTc                                                               <  1:4588634/93‑1 (MQ=255)

                            aTTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTcc                                                              >  2:4602502/1‑93 (MQ=255)

                            aTTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTcc                                                              <  1:2298403/93‑1 (MQ=255)

                             ttCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCg                                                             >  1:2538199/1‑93 (MQ=255)

                                 tGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTa                                                         <  1:3463319/93‑1 (MQ=255)

                                 tGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTa                                                         >  2:3133072/1‑93 (MQ=255)

                                 tGAAGTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTa                                                         <  1:1985794/93‑1 (MQ=255)

                                   aaTTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATg                                                       >  1:816220/1‑93 (MQ=255)

                                    aTTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGc                                                      >  2:302278/1‑93 (MQ=255)

                                       tGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCAcc                                                   <  1:769829/93‑1 (MQ=255)

                                       tGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCAcc                                                   <  2:2485028/93‑1 (MQ=255)

                                        gccgccCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCa                                                  <  2:1104374/93‑1 (MQ=255)

                                         ccgccCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAg                                                 <  2:2305938/93‑1 (MQ=255)

                                           gccCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCACGt                                               >  1:931823/1‑93 (MQ=255)

                                            cccGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTa                                              >  1:2868651/1‑93 (MQ=255)

                                            cccGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTa                                              >  1:3523406/1‑93 (MQ=255)

                                             ccGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTAc                                             >  2:2294862/1‑93 (MQ=255)

                                               gTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCg                                           >  1:3173470/1‑93 (MQ=255)

                                                tttCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCgg                                          >  1:1359555/1‑93 (MQ=255)

                                                   cGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAg                                       >  1:1931759/1‑93 (MQ=255)

                                                    ggTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGaata                                      <  2:2959006/93‑3 (MQ=255)

                                                    ggTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGa                                      <  2:1922364/93‑1 (MQ=255)

                                                    ggTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGa                                      >  2:4054920/1‑93 (MQ=255)

                                                    ggTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGa                                      <  2:2694129/93‑1 (MQ=255)

                                                    ggTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGa                                      <  2:2694128/93‑1 (MQ=255)

                                                     gTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGAt                                     <  2:3197216/93‑1 (MQ=255)

                                                      tGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATg                                    <  2:1758261/93‑1 (MQ=255)

                                                      tGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATg                                    <  1:1966139/93‑1 (MQ=255)

                                                           tggctgACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAg                               <  2:3602990/93‑1 (MQ=255)

                                                             gctgACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAggg                             <  2:677561/93‑1 (MQ=255)

                                                             gctgACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAggg                             <  1:2609616/93‑1 (MQ=255)

                                                             gctgACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAggg                             >  2:1957018/1‑93 (MQ=255)

                                                               tgACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGt                           >  1:330157/1‑93 (MQ=255)

                                                               tgACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGt                           >  2:534690/1‑93 (MQ=255)

                                                                gACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTa                          <  1:312381/93‑1 (MQ=255)

                                                                gACCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTa                          >  1:3399416/1‑93 (MQ=255)

                                                                 aCCTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTAt                         >  1:2479616/1‑93 (MQ=255)

                                                                  ccTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATc                        >  2:4598149/1‑93 (MQ=255)

                                                                  ccTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATc                        <  1:3601795/93‑1 (MQ=255)

                                                                   cTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATcc                       <  2:3836597/93‑1 (MQ=255)

                                                                   cTTTATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATcc                       >  2:1881102/1‑93 (MQ=255)

                                                                    tttATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATccc                      >  1:3772463/1‑93 (MQ=255)

                                                                    tttATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATccc                      >  2:216089/1‑93 (MQ=255)

                                                                    tttATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATccc                      >  2:1235274/1‑93 (MQ=255)

                                                                     ttATATTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCccg                     >  2:4500045/1‑93 (MQ=255)

                                                                      tataTTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCACAGGGGTATCccgc                    >  2:540276/1‑93 (MQ=255)

                                                                        tatTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCccgccg                  <  2:2066175/93‑1 (MQ=255)

                                                                        tatTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCccgccg                  >  2:4100809/1‑93 (MQ=255)

                                                                         atTTTTAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGt                 >  2:141848/1‑93 (MQ=255)

                                                                          tttttAAACGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTc                >  2:1493034/1‑93 (MQ=255)

                                                                                 aCGTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCg         <  2:2488132/93‑1 (MQ=255)

                                                                                   gTGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGaa       <  2:1488094/93‑1 (MQ=255)

                                                                                    tGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGTTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAAc      <  1:2507691/93‑1 (MQ=255)

                                                                                    tGAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAAc      <  1:3216576/93‑1 (MQ=255)

                                                                                     gAACCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACa     <  1:770380/93‑1 (MQ=255)

                                                                                      aaCCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAg    >  1:742949/1‑93 (MQ=255)

                                                                                      aaCCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAg    <  2:1913232/93‑1 (MQ=255)

                                                                                       aCCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGt   <  1:3059952/93‑1 (MQ=255)

                                                                                       aCCGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGt   >  1:1290613/1‑93 (MQ=255)

                                                                                        ccGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCTGCCGTCACACCCGAACAGtt  >  2:3450533/1‑93 (MQ=255)

                                                                                        ccGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGtt  <  1:2698/93‑1 (MQ=255)

                                                                                        ccGCGTTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGCTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGtt  <  1:4272328/93‑1 (MQ=255)

GTCACCGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCG‑TTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTT  >  NC_000913/2231407‑2231586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`