Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3421377–3421870	3422212–3421880	11–836	33 [30]	[26] 31	[rrfD]–[rrlD]	[rrfD],[rrlD]

CATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGG  >  NC_000913/3421284‑3421390                                                                                             |               cATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTg                >  1:691372/1‑93 (MQ=255) cATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTg                >  1:3185176/1‑93 (MQ=255) cATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCAGCGCTACGGCGTTTCACTTCTg                >  1:883517/1‑93 (MQ=255)  atatCCGCACGCTAAATTTGATGCCTGGCATTGCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTGTCACTTCTGa               <  2:1640203/93‑1 (MQ=14)  atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa               >  2:3887413/1‑93 (MQ=255)  atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa               >  2:3508364/1‑93 (MQ=255)  atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGAGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa               >  1:4410278/1‑93 (MQ=255)    atCAGCACGCTAAATTTGATGGCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGt             <  2:1342558/93‑1 (MQ=255)    atCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGt             <  2:429403/93‑1 (MQ=255)    atCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGt             >  2:2481473/1‑93 (MQ=255)     tCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt            >  2:1477306/1‑93 (MQ=255)      cAGCTCGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc           <  2:693629/93‑1 (MQ=37)       aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg          >  2:3632338/1‑93 (MQ=40)       aGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg          >  1:2194479/1‑93 (MQ=40)        gCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCgg         >  1:1289396/1‑93 (MQ=39)          aCGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCa       >  1:3799566/1‑93 (MQ=35)          aCGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCa       >  1:2560562/1‑93 (MQ=35)           tgCTATATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt      <  2:3043982/92‑1 (MQ=14)           cGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt      >  2:2784951/1‑93 (MQ=34)           cGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCAt      <  1:2018905/93‑1 (MQ=34)            gCTAAATTTGCTGCCTGGCAGTTCCCTACTCTCGCATTGGGGGACCCCACACTACCATCGGCGCTACGGCGGTTCACTTCTGAGTTCGGCATg     >  2:162797/1‑93 (MQ=11)            gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTCCCATCGGCTCTCCTGCGCTTCACTTCTGAGTTCGGCATg     >  2:2350919/1‑93 (MQ=11)            gCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATg     >  2:3930301/1‑93 (MQ=33)             cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg    >  2:3253547/1‑93 (MQ=33)             cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg    >  1:1555073/1‑93 (MQ=33)             cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg    >  1:2479851/1‑93 (MQ=33)             cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg    >  2:602060/1‑93 (MQ=33)             cTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg    <  1:1175798/93‑1 (MQ=33)              tAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATggg   >  1:169913/1‑93 (MQ=32)              tAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATggg   <  2:4627321/93‑1 (MQ=32)               aaaTTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgggg  <  1:2104039/93‑1 (MQ=31)               aaaTTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgggg  >  1:4029674/1‑93 (MQ=31)               aaaTTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgggg  <  1:2254948/93‑1 (MQ=31)                                                                                             |               CATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGG  >  NC_000913/3421284‑3421390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑