Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,192,7231.G55.9% 436.7 / inf 247intergenic (+182/+238)b3051/b3052putative membrane protein/putative kinase
Reads supporting (aligned to +/- strand):  ref base . (44/65);  new base G (71/67);  total (115/132)
Fisher's exact test for biased strand distribution p-value = 9.54e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.38e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 294 total aligned reads displayed.

CAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCA‑GGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGATTGTGTTG  >  NC_000913/3192631‑3192814
                                                                                             |                                                                                            
 agcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTcagca‑g                                                                                             >  2:2803330/1‑93 (MQ=255)
  gcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCA‑gg                                                                                            >  1:4441166/1‑93 (MQ=255)
  gcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCA‑gg                                                                                            >  1:1179970/1‑93 (MQ=255)
  gcaTTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCA‑gg                                                                                            >  2:2520141/1‑93 (MQ=255)
     ttttGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCA‑ggggg                                                                                         >  1:847649/1‑93 (MQ=255)
     ttttGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑c                                                                                       <  1:1566460/93‑1 (MQ=255)
     ttttGCGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑c                                                                                       <  1:653647/93‑1 (MQ=255)
          cGTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGaaa                                                                                  <  1:4570269/93‑1 (MQ=255)
            tGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGaaa                                                                                  >  2:3518585/1‑93 (MQ=255)
             gACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAAc                                                                                 <  1:4623644/93‑1 (MQ=255)
             gACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAAc                                                                                 <  2:1929171/93‑1 (MQ=255)
             gACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAAc                                                                                 >  1:954736/1‑93 (MQ=255)
             gACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACgg                                                                               <  1:2376467/93‑1 (MQ=255)
             gACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACgg                                                                               <  1:574724/93‑1 (MQ=255)
               ccgCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGa                                                                             <  1:4308561/91‑1 (MQ=255)
                 gCTCGGGGAAGGCAAAATTGCCTCTGAGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGaaa                                                                           <  1:2978658/93‑1 (MQ=255)
                 gCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGa                                                                             >  1:3972830/1‑93 (MQ=255)
                 gCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGa                                                                             <  1:2780100/93‑1 (MQ=255)
                  cTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAg                                                                          <  2:1277784/93‑1 (MQ=255)
                  cTCGGGGAAGACAAAATTGCCTCTGGGAGAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑GGGGG‑CTGAAACGGGAAAg                                                                          <  2:3194859/93‑1 (MQ=255)
                   tCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGc                                                                         <  2:3634687/93‑1 (MQ=255)
                   tCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGaaa                                                                           <  2:4036477/93‑1 (MQ=255)
                    cGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAg                                                                          <  2:3692045/93‑1 (MQ=255)
                     ggggAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGccc                                                                       <  2:1521344/93‑1 (MQ=255)
                      gggAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGcccc                                                                      >  2:2932407/1‑93 (MQ=255)
                      gggAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGcc                                                                        >  2:4339373/1‑93 (MQ=255)
                       ggAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCt                                                                     >  2:827813/1‑93 (MQ=255)
                        gAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGcccc                                                                      <  1:3073447/93‑1 (MQ=255)
                         aaGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTcc                                                                   <  2:4679906/93‑1 (MQ=255)
                          aGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTccc                                                                  <  2:388120/93‑1 (MQ=255)
                           ggCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGTAACGGGAAAGCCCCTCCCg                                                                 >  1:2083526/1‑93 (MQ=255)
                             cAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCgaa                                                               <  1:2817506/93‑1 (MQ=25)
                             cAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCgaa                                                               <  1:4243922/93‑1 (MQ=25)
                               aaaTTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCgaaga                                                             <  1:2048297/93‑1 (MQ=25)
                               aaaCTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCgaa                                                               >  1:1235570/1‑93 (MQ=255)
                                 aCTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCgaaga                                                             <  2:4408396/93‑1 (MQ=255)
                                     cATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAggg                                                         <  2:2778084/93‑1 (MQ=255)
                                      aTCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAgggg                                                        <  1:232217/93‑1 (MQ=255)
                                      aTCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTAAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAgggg                                                        <  1:2511319/93‑1 (MQ=255)
                                       tCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAggggg                                                       >  2:2007636/1‑93 (MQ=255)
                                       tCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAggggg                                                       >  2:21601/1‑93 (MQ=255)
                                       tCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAggggg                                                       <  1:1268058/93‑1 (MQ=255)
                                         agagAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGcc                                                     <  1:3212775/93‑1 (MQ=255)
                                          gagaAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCt                                                    >  2:2188446/1‑93 (MQ=255)
                                          gagaAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCt                                                    <  2:2553740/93‑1 (MQ=255)
                                              aaGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAACCGGGAAAGCACCTCCCGAAGAAGGGGGCCTTACa                                                <  2:1653673/93‑1 (MQ=255)
                                              aaGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACa                                                <  2:1596347/93‑1 (MQ=255)
                                               aGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGCAGAAGGGGGCCTTACAg                                               >  1:1524750/1‑93 (MQ=255)
                                               aGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGACCTACAg                                               >  2:2684325/1‑93 (MQ=38)
                                                gCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGa                                              >  2:2352548/1‑93 (MQ=255)
                                                 cATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGaa                                             >  2:3423403/1‑93 (MQ=255)
                                                 cATTGCGTGCGGTCTGGCGCGCATCAACAAGCGGGGAGTCAGCA‑GGGGGCCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGACCTTACAGaa                                             <  2:720743/93‑1 (MQ=37)
                                                  aTTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCGGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAg                                            >  1:2415105/1‑93 (MQ=255)
                                                  aTTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGTAg                                            >  1:1928537/1‑93 (MQ=255)
                                                  aTTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAg                                            <  1:226835/93‑1 (MQ=255)
                                                  aTTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAg                                            <  1:3361892/93‑1 (MQ=255)
                                                     gcgcGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAgg                                      <  1:1819424/93‑1 (MQ=18)
                                                     gcgcGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAgg                                      <  2:3308394/93‑1 (MQ=18)
                                                     gcgcGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAgg                                      <  1:4397344/93‑1 (MQ=18)
                                                      cgcggggTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAggg                                     <  1:372933/90‑1 (MQ=18)
                                                      cgcggggTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAggg                                     >  2:4091517/4‑93 (MQ=18)
                                                       gcggggTCCGGCGGTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGt                                    >  2:4501609/3‑93 (MQ=17)
                                                       gcggggTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGt                                    >  2:3102402/3‑93 (MQ=18)
                                                       gTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAg                                       >  2:4615/1‑93 (MQ=255)
                                                       gTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAg                                       >  2:4353587/1‑93 (MQ=255)
                                                        tGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAgg                                      <  2:564256/93‑1 (MQ=255)
                                                           ggTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGtt                                   <  1:3254038/93‑1 (MQ=255)
                                                           ggTCCGGCGCTCATCAACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTatg                                >  1:4113406/1‑93 (MQ=18)
                                                            gTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTa                                  <  2:1144140/93‑1 (MQ=255)
                                                            gTCTGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTa                                  <  1:2621367/93‑1 (MQ=255)
                                                             tCTGGCGCGCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTat                                 <  1:3542265/93‑1 (MQ=255)
                                                               tGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTatga                               <  1:2701295/93‑1 (MQ=255)
                                                               tGGCGCTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTatga                               >  1:3839540/1‑93 (MQ=255)
                                                                ggCGCTAATAACCAACCGGGAAGTCAGCAGGGGGG‑CTGAAACGGAAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTatgat                              <  2:1715391/93‑1 (MQ=25)
                                                                  cgcTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTAtgatga                            <  2:2049154/93‑1 (MQ=255)
                                                                   gcTCATCAACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCACTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGaa                           >  2:495312/1‑93 (MQ=255)
                                                                     tcatcaACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGc                         >  2:4221357/1‑93 (MQ=255)
                                                                     tcatcaACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCg                      <  1:3423129/93‑1 (MQ=18)
                                                                       atcaACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtt                    <  1:1707312/93‑2 (MQ=17)
                                                                        tcaACAATCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCg                      >  1:468429/1‑93 (MQ=255)
                                                                        tcaACAATCGGGGAGTCAGCAGGGGGG‑CCGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCg                      >  1:1778072/1‑93 (MQ=255)
                                                                        tcaACAATCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtca                   >  1:1049625/1‑93 (MQ=17)
                                                                          aacaaTCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtcatc                 >  2:4249560/1‑93 (MQ=17)
                                                                           acaaTCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGtca                   <  1:3665441/93‑1 (MQ=255)
                                                                           acaaTCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGtca                   <  2:4145045/93‑1 (MQ=255)
                                                                           acaaTCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtcatca                <  2:898495/93‑1 (MQ=17)
                                                                           acaaTCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCATCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtcatca                <  1:27487/93‑1 (MQ=17)
                                                                            caaTCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTcatcat               <  2:2204247/93‑1 (MQ=17)
                                                                             aaTCGGGGAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGGTATGATGAAGCTCGtcatc                 <  2:4562613/93‑1 (MQ=255)
                                                                             aaTCGGGG‑GGCAGCA‑AGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATa              <  2:953286/93‑1 (MQ=17)
                                                                                  gggAGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACt            >  2:1867924/1‑93 (MQ=255)
                                                                                     aGTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGAt         >  2:1342021/1‑93 (MQ=255)
                                                                                      gTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGAtt        <  2:3749837/93‑1 (MQ=255)
                                                                                      gTCAGCAGGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGAtt        <  2:1114433/93‑1 (MQ=255)
                                                                                       gcagca‑aGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTtgtg     <  1:1342021/92‑1 (MQ=17)
                                                                                        cagcagGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGATtgt      <  2:642654/93‑1 (MQ=255)
                                                                                        cagcagGGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGATtgt      <  1:1152140/93‑1 (MQ=255)
                                                                                         agca‑aGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGtgtt   <  1:760087/93‑1 (MQ=17)
                                                                                         agca‑aGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGtgtt   >  1:1595353/1‑93 (MQ=17)
                                                                                          gca‑aGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAA‑GGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGtgttg  <  1:1025151/93‑1 (MQ=17)
                                                                                             |                                                                                            
CAGCATTTTGCGTGACGGCTCGGGGAAGGCAAAACTGCATCAGAGAAAGCATTGCGTGGGGTCTGGCGCTCATCAACAATCGGGGAGTCAGCA‑GGGGG‑CTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGGCCTTACAGAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGATTGTGTTG  >  NC_000913/3192631‑3192814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑