| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,620,219 | 0 | A | G | 61.5% | 61.2 / 100.2 | 96 | M1133V (ATG→GTG) | rhsB | RhsB |
| Reads supporting (aligned to +/- strand): ref base A (22/15); new base G (25/34); total (47/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.07e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 106 total aligned reads displayed.
GTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA > NC_000913/3620198‑3620311 | tGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGgcgc > 2:756610/1‑93 (MQ=17) tGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGgcgc < 2:4295647/93‑1 (MQ=17) tGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGgcgc < 2:1363828/93‑1 (MQ=17) tGGAGCAGATGAAAAACCAGGTGGACCCGGTGTACACG‑CGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCCGCCCCTGGCGCt > 2:3557265/1‑93 (MQ=11) gggAGCAGATAAAAACCCAGGTGGCCCGGGTTCACACGCCGCCGCAAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGgcgc < 2:4446367/92‑1 (MQ=11) ggAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCt > 1:2178669/1‑93 (MQ=18) ggAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCt < 1:2483896/93‑1 (MQ=33) gAGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtc > 1:1109062/1‑93 (MQ=21) aGCAGATGAAAACCCAGGGGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtca < 2:448555/93‑1 (MQ=11) aGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtca < 1:840966/93‑1 (MQ=255) aGCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtca < 2:4143217/93‑1 (MQ=25) gCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcat > 1:4482942/1‑93 (MQ=255) gCAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcat < 1:2999999/93‑1 (MQ=37) gCAGATGAAAAACCAGGTGGACCCGGTGTACACGACGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcat > 1:3362157/1‑93 (MQ=255) cAGATGAAAAACCAGGTGGACCCGGTGTCCACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc < 1:2743789/93‑1 (MQ=255) cAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc < 1:3154723/93‑1 (MQ=255) cAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc > 1:3662488/1‑93 (MQ=255) cAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc < 1:3725687/93‑1 (MQ=255) cAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc < 1:11169/93‑1 (MQ=255) cAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc > 1:676018/1‑93 (MQ=37) cAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc < 2:552841/93‑1 (MQ=255) cAGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatc < 1:1079212/93‑1 (MQ=255) ataTGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca < 1:4236245/91‑1 (MQ=255) aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca < 2:2728058/93‑1 (MQ=17) aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca < 2:3789910/93‑1 (MQ=17) aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca < 1:3652556/93‑1 (MQ=17) aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGACCTGCCGCTGGCGCtcatca > 1:3393420/1‑93 (MQ=12) aGATGCAAAACAAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca > 1:3324298/1‑93 (MQ=9) aGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca < 2:1702373/93‑1 (MQ=255) aGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca > 2:2802763/1‑93 (MQ=255) aGATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca < 1:3057162/93‑1 (MQ=255) gATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAg > 2:2727987/1‑93 (MQ=18) gATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAg > 1:146731/1‑93 (MQ=18) gATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAg > 2:2491969/1‑93 (MQ=255) gATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAg > 1:3500276/1‑93 (MQ=37) gATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAg > 2:4145375/1‑93 (MQ=255) gATGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAg < 1:4065239/93‑1 (MQ=255) aTGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGc > 2:1189112/1‑93 (MQ=18) aTGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGc < 2:4186420/93‑1 (MQ=255) aTGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGc < 1:3277476/93‑1 (MQ=255) aTGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGc > 1:2485046/1‑93 (MQ=255) tgcaaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCCCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa < 1:4456971/90‑1 (MQ=255) tgcaaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa > 1:899784/4‑93 (MQ=18) tGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa < 2:2512762/93‑1 (MQ=255) tGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa > 1:1730888/1‑93 (MQ=255) tGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa < 2:2165563/93‑1 (MQ=37) tGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa < 2:3452484/93‑1 (MQ=255) tGAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa < 1:1332391/93‑1 (MQ=255) gcacaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAACCCGCCTGTACCACTGCGCCCATCGCGGCCTGCCGCTGGCTCTCATCAGCAc < 2:1829287/89‑1 (MQ=11) gcaaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAc < 2:4421416/91‑1 (MQ=25) gcaaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAc < 1:2192994/91‑1 (MQ=25) gcaaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAc > 2:2161794/3‑93 (MQ=21) gcaaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAc > 2:4265977/3‑93 (MQ=21) gAAAAACCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAc < 1:3101861/93‑1 (MQ=255) aaaaaaCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCAc < 1:1396394/92‑1 (MQ=255) caaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTCCCACTGCGCCCATCGCGGCCTGCCGCTGGCGCTCATCAGCACg < 1:636830/92‑1 (MQ=255) aaaaaCCAGGTGGACCCGTTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACg < 2:4277448/93‑1 (MQ=255) aaaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACgg > 1:3072360/1‑93 (MQ=37) aaaCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGa > 2:3345110/1‑93 (MQ=37) aaaCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGa > 1:2889552/1‑93 (MQ=37) aaaCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGa < 1:115107/93‑1 (MQ=255) aaaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAACACGGa > 1:3085780/1‑93 (MQ=37) aaCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGaa < 2:1009061/93‑1 (MQ=255) aaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGaa > 1:2641603/1‑93 (MQ=37) aaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGaa > 2:4539965/1‑93 (MQ=37) aaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGaa > 2:2633600/1‑93 (MQ=37) aaCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGaa > 2:3987076/1‑93 (MQ=37) aCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAg < 2:2312056/93‑1 (MQ=255) aCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAg < 1:4079330/93‑1 (MQ=255) aCCAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAg > 2:2721715/1‑93 (MQ=37) aCCAGATGGACCGGGTGTACACGCCGCCGCAAAAAATCCCCCTGTACCACGGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAg < 1:3311436/93‑1 (MQ=14) aCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAg > 2:1344245/1‑93 (MQ=37) aCCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAg < 1:1766118/93‑1 (MQ=39) ccAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCGCCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 1:1947022/93‑1 (MQ=255) ccAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 2:3293473/93‑1 (MQ=255) ccAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg > 1:4187299/1‑93 (MQ=37) ccAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 1:3981085/93‑1 (MQ=255) ccAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 1:2383853/93‑1 (MQ=255) ccAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 1:3991587/93‑1 (MQ=37) ccAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 1:4228266/93‑1 (MQ=39) ccAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 1:3760188/93‑1 (MQ=39) ccAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg < 2:1650791/93‑1 (MQ=37) cAGTTGGACCGGGTGTACACGCGGGCGCGAAAAACCCACCTGTACCACGGCGGCCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg < 2:3139314/93‑1 (MQ=14) cAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg > 1:3144337/1‑93 (MQ=37) cAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg > 2:3163121/1‑93 (MQ=37) cAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg < 2:1045565/93‑1 (MQ=255) cAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg > 2:2301529/1‑93 (MQ=37) cAGGTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg < 2:4207704/93‑1 (MQ=255) cAGATGGACCCGGTGTACACGCGGGCGCGAAAAATCCCCCTGTACCACTGCGACCACCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg < 2:2063224/93‑1 (MQ=255) cAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg < 1:3624563/93‑1 (MQ=39) cAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg < 2:597997/93‑1 (MQ=38) cAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAggg > 2:137964/1‑93 (MQ=37) aGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgggg > 2:4483826/1‑93 (MQ=37) aGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgggg > 2:3193464/1‑93 (MQ=37) gATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGc > 1:4072265/1‑93 (MQ=37) gATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGc > 1:2877955/1‑93 (MQ=37) gATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGc > 1:4074375/1‑93 (MQ=37) gATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGc > 2:1094612/1‑93 (MQ=37) gATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGc < 1:2069361/93‑1 (MQ=39) aTGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCa > 1:3124432/1‑93 (MQ=37) | GTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCA > NC_000913/3620198‑3620311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |