BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,834,144	T→C	L435L (TTA→TTG)	hypF ←	transcriptional regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,834,144	0	T	C	100.0%	500.2 / NA	159	L435L (TTA→TTG)	hypF	transcriptional regulatory protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/77); total (82/77)

Only 100 of 167 total aligned reads displayed.

TTCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGTAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCA  >  NC_000913/2834054‑2834233

ttCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCaa                                                                                         <  2:1904534/93‑1 (MQ=255)

 tCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAAc                                                                                        <  1:3101491/93‑1 (MQ=255)

   aCGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGc                                                                                      >  1:974353/1‑93 (MQ=255)

    cgcgCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCt                                                                                     >  1:720594/1‑93 (MQ=255)

      cgcCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTc                                                                                   <  2:2574346/93‑1 (MQ=255)

        cccACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTcgc                                                                                 >  2:2267577/1‑93 (MQ=255)

         ccACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTcgcg                                                                                >  1:4332076/1‑93 (MQ=255)

          cACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGGGCAAAGCTTCgcgc                                                                               >  2:2470211/1‑93 (MQ=255)

          cACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCgcgc                                                                               <  1:4008198/93‑1 (MQ=255)

            ctggctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCa                                                                             <  2:2401097/93‑1 (MQ=255)

            ctggctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCa                                                                             >  2:2853746/1‑93 (MQ=255)

            ctggctggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCa                                                                             <  2:1554321/93‑1 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        >  2:1791471/1‑93 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        <  1:885923/93‑1 (MQ=255)

                 tggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCa                                                                        >  1:1232945/1‑93 (MQ=255)

                  ggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCAt                                                                       >  1:2392092/1‑93 (MQ=255)

                  ggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCAt                                                                       >  1:532671/1‑93 (MQ=255)

                  ggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCAt                                                                       >  1:2541612/1‑93 (MQ=255)

                  ggAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCAt                                                                       >  1:2375289/1‑93 (MQ=255)

                   gagaCATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATc                                                                      <  2:1673986/93‑1 (MQ=255)

                      aCATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTgg                                                                   <  2:3508297/93‑1 (MQ=255)

                       cATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGa                                                                  <  1:4314189/93‑1 (MQ=255)

                        aTAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGAt                                                                 <  2:2963972/93‑1 (MQ=255)

                        aTAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGAt                                                                 >  1:3962859/1‑93 (MQ=255)

                        aTAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGAt                                                                 >  1:3376291/1‑93 (MQ=255)

                         tAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATg                                                                <  2:866037/93‑1 (MQ=255)

                             ccGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCAt                                                            >  2:3960737/1‑93 (MQ=255)

                              cGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATc                                                           <  1:4107083/93‑1 (MQ=255)

                              cGGATGCGCGTCATGCACAACGTATTGCGCGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATc                                                           <  1:1494756/93‑1 (MQ=255)

                               ggATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCg                                                          <  2:470932/93‑1 (MQ=255)

                               ggATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGCAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCg                                                          >  1:732810/1‑93 (MQ=255)

                               ggATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGAAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCg                                                          >  2:3276973/1‑93 (MQ=255)

                                gATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGt                                                         >  2:1265877/1‑93 (MQ=255)

                                gATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGt                                                         >  2:1681927/1‑93 (MQ=255)

                                 aTGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTc                                                        <  1:1784157/93‑1 (MQ=255)

                                 aTGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTc                                                        >  1:374374/1‑93 (MQ=255)

                                  tGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCa                                                       <  1:2069382/93‑1 (MQ=255)

                                   gcgcGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCAc                                                      <  1:869745/93‑1 (MQ=255)

                                    cgcgTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACt                                                     <  1:3094399/93‑1 (MQ=255)

                                    cgcgTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACt                                                     <  1:2849111/93‑1 (MQ=255)

                                     gcgTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACtt                                                    <  2:42789/93‑1 (MQ=255)

                                      cgTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTa                                                   <  1:3160306/93‑1 (MQ=255)

                                       gTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaa                                                  >  2:2949523/1‑93 (MQ=255)

                                       gTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCACGCCACTGCATCTGGATGCCATCGTCACTTaa                                                  >  2:278769/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 >  2:4434768/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 <  2:1037795/93‑1 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 >  2:2002260/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 <  1:2818504/93‑1 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 >  2:334388/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 >  1:4646851/1‑93 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 <  1:4374784/93‑1 (MQ=255)

                                        tCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTaaa                                                 <  1:2965195/93‑1 (MQ=255)

                                         cATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAAt                                                <  2:2543893/93‑1 (MQ=255)

                                         cATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAAt                                                >  2:4200891/1‑93 (MQ=255)

                                          aTGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATc                                               >  1:4544859/1‑93 (MQ=255)

                                            gCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGc                                             <  1:574943/93‑1 (MQ=255)

                                              acaACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGccc                                           <  2:4405524/93‑1 (MQ=255)

                                                aaCGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAg                                         >  2:3725454/1‑93 (MQ=255)

                                                 aCGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGa                                        <  1:3543922/93‑1 (MQ=255)

                                                  cGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGAt                                       >  2:4033373/1‑93 (MQ=255)

                                                  cGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGAt                                       <  2:1112414/93‑1 (MQ=255)

                                                   gTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATg                                      >  2:3809573/1‑93 (MQ=255)

                                                    tATTGCGGGGGAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGCATGCCATCGTCACTTAAATCGACCAGATGc                                     >  2:3069002/1‑93 (MQ=255)

                                                      ttGCGGGGTAAAATCGTAGATGTTTTGCAACAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTg                                   <  1:3667844/93‑1 (MQ=255)

                                                       tGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGa                                  <  2:3585393/93‑1 (MQ=255)

                                                        gCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGAc                                 <  1:95073/93‑1 (MQ=255)

                                                          ggggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTc                               >  1:1756976/1‑93 (MQ=255)

                                                           gggTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCa                              >  2:1919045/1‑93 (MQ=255)

                                                             gTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAac                            >  2:3547690/1‑93 (MQ=255)

                                                             gTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAac                            >  2:535802/1‑93 (MQ=255)

                                                             gTAAAATCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAac                            <  2:1649829/93‑1 (MQ=255)

                                                               aaaaTCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAacac                          <  1:2734802/93‑1 (MQ=255)

                                                                   tCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCt                      >  1:1627299/1‑93 (MQ=255)

                                                                   tCGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCt                      >  1:2764094/1‑93 (MQ=255)

                                                                    cGTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCtt                     >  2:3373364/1‑93 (MQ=255)

                                                                     gTAGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTg                    >  1:1962053/1‑93 (MQ=255)

                                                                       aGATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGtt                  <  1:134974/93‑1 (MQ=255)

                                                                        gATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTc                 <  2:2097697/93‑1 (MQ=255)

                                                                        gATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTc                 >  2:1850373/1‑93 (MQ=255)

                                                                        gATGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTc                 >  1:919476/1‑93 (MQ=255)

                                                                         aTGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCa                >  2:3179015/1‑93 (MQ=255)

                                                                          tGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAc               >  1:1611459/1‑93 (MQ=255)

                                                                          tGTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAc               <  1:2583178/93‑1 (MQ=255)

                                                                           gTTTTGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCAcc              <  1:4394367/93‑1 (MQ=255)

                                                                            ttttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcg             <  2:4386331/93‑1 (MQ=255)

                                                                            ttttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcg             <  1:1476608/93‑1 (MQ=255)

                                                                            ttttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACcg             <  2:2834135/93‑1 (MQ=255)

                                                                              ttGCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGCTCACcgcc           >  1:3367896/1‑92 (MQ=255)

                                                                                gCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCa         >  2:3472551/1‑93 (MQ=255)

                                                                                gCATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCa         <  2:4235017/93‑1 (MQ=255)

                                                                                 cATCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCAc        <  2:3014886/93‑1 (MQ=255)

                                                                                  aTCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCAcc       >  1:1347154/1‑93 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCa      >  2:1359888/1‑93 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCa      >  2:3913331/1‑93 (MQ=255)

                                                                                   tCAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATCCTGACTCAACACCGCTTGTTCACCGCGCACCa      >  1:1009378/1‑93 (MQ=255)

                                                                                    cAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAg     <  1:3882202/93‑1 (MQ=255)

                                                                                    cAGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAg     <  2:1275500/93‑1 (MQ=255)

                                                                                     aGGCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAgg    <  1:4171664/93‑1 (MQ=255)

                                                                                      ggCGCAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGc   >  2:4239766/1‑93 (MQ=255)

                                                                                       gcgcAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCa  <  2:677880/93‑1 (MQ=255)

TTCACGCGCCCACTGGCTGGAGACATAGCCCGGATGCGCGTCATGCACAACGTATTGCGGGGTAAAATCGTAGATGTTTTGCATCAGGCGTAACGCTTCGCGCCACTGCATCTGGATGCCATCGTCACTTAAATCGCCCAGATGCTGACTCAACACCGCTTGTTCACCGCGCACCAGGCA  >  NC_000913/2834054‑2834233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`