Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,844,731 G→A F235F (TTC→TTT hycD ← membrane‑spanning protein of hydrogenase 3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,844,7310GA98.6% 508.9 / ‑3.6 144F235F (TTC→TTThycDmembrane‑spanning protein of hydrogenase 3
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (71/71);  total (72/72)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.84e-01

Only 100 of 152 total aligned reads displayed.

CACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACGAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCAGAGAGCGGGCCTTC  >  NC_000913/2844641‑2844820
                                                                                          |                                                                                         
caccaGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACaaa                                                                                         <  1:4298604/93‑1 (MQ=255)
 accaGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGCCAAAc                                                                                        >  2:2837353/1‑93 (MQ=255)
 accaGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAAc                                                                                        <  1:1134194/93‑1 (MQ=255)
 accaGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAAc                                                                                        <  2:2488566/93‑1 (MQ=255)
 accaGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGGTTCCATTTGTCCCCACGGAATAAACACCCCGACAAAc                                                                                        >  2:3278979/1‑93 (MQ=255)
  ccaGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACa                                                                                       >  2:3706896/1‑93 (MQ=255)
   caGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACAt                                                                                      >  1:553214/1‑93 (MQ=255)
    cgTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATc                                                                                     <  1:321461/92‑1 (MQ=255)
    aGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATc                                                                                     <  1:2815441/93‑1 (MQ=255)
      ttttACGATGGCAATCACCAGCGCCAGCACCAGACCACCGGCGGTGAAGGCTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTg                                                                                   >  1:4165441/1‑93 (MQ=255)
       tttACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGc                                                                                  <  1:3672748/93‑1 (MQ=255)
       tttACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGc                                                                                  >  2:1000433/1‑93 (MQ=255)
       tttACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGc                                                                                  <  1:3225439/93‑1 (MQ=255)
          aCGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAac                                                                               >  1:811398/1‑93 (MQ=255)
             aTGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAAcacc                                                                            <  1:1009998/93‑1 (MQ=255)
             aTGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAAcacc                                                                            <  2:4427010/93‑1 (MQ=255)
               ggCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAAcaccac                                                                          >  1:4606868/1‑93 (MQ=255)
                gCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGATTCCATTTGTCCCCACGGAATAAAAACCCCGACAAACATCTGCGACaccacc                                                                         >  1:1462498/1‑93 (MQ=255)
                  aaTCACCAGCTCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAg                                                                       <  2:183388/93‑1 (MQ=255)
                   aTCACCAGCGCGAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCGCCAGc                                                                      <  2:3016603/93‑1 (MQ=255)
                   aTCACCAGCGCCAGCAGCAGTCCACCGGCTGTGAAGGTTTCCATTTGCCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGc                                                                      <  2:3815462/93‑1 (MQ=255)
                   aTCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGc                                                                      <  1:480830/93‑1 (MQ=255)
                    tCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCt                                                                     <  2:602378/93‑1 (MQ=255)
                      aCCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCTCCAGCTGt                                                                   <  2:4550730/93‑1 (MQ=255)
                      aCCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGt                                                                   >  1:1870625/1‑93 (MQ=255)
                       ccAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGtt                                                                  >  2:1854133/1‑93 (MQ=255)
                        cAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGttt                                                                 >  2:3662976/1‑93 (MQ=255)
                         aGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTc                                                                <  2:3206625/93‑1 (MQ=255)
                         aGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTc                                                                >  1:2996559/1‑93 (MQ=255)
                           cgcCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAg                                                              <  1:3682904/93‑1 (MQ=255)
                           cgcCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAg                                                              <  2:3003044/93‑1 (MQ=255)
                            gcCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAgg                                                             <  1:638919/93‑1 (MQ=255)
                             ccAGGAGGAGGCCCCCGGCCGTGGAGGGTTCCAATTGGTCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGc                                                            <  1:1487824/93‑1 (MQ=255)
                             ccAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACCCCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGc                                                            <  2:54833/93‑1 (MQ=255)
                             ccAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACCCCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGc                                                            <  1:73744/93‑1 (MQ=255)
                             ccAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGc                                                            <  1:4472454/93‑1 (MQ=255)
                              cagcagcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCt                                                           <  2:2525239/93‑1 (MQ=255)
                              cagcagcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTCCAACACCACCAGCTGTTTCAGGCt                                                           <  1:1080008/93‑1 (MQ=255)
                               agcagcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTg                                                          >  2:3359321/1‑93 (MQ=255)
                                gcagcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGa                                                         >  2:1068593/1‑93 (MQ=255)
                                gcagcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGa                                                         <  2:4114070/93‑1 (MQ=255)
                                 cagcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGAt                                                        <  2:1943830/93‑1 (MQ=255)
                                 cagcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGAt                                                        <  1:143909/93‑1 (MQ=255)
                                   gcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACGAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAc                                                      <  1:775629/93‑1 (MQ=255)
                                   gcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAc                                                      <  1:1234665/93‑1 (MQ=255)
                                   gcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAc                                                      >  2:1791452/1‑93 (MQ=255)
                                   gcagTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAc                                                      >  1:2048317/1‑93 (MQ=255)
                                     agTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAccc                                                    >  2:4609364/1‑93 (MQ=255)
                                     agTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAccc                                                    <  2:1784172/93‑1 (MQ=255)
                                      gTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAcccc                                                   >  1:295879/1‑93 (MQ=255)
                                      gTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATAcccc                                                   <  1:3099351/93‑1 (MQ=255)
                                       tCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACCCCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCa                                                  <  1:288085/93‑1 (MQ=255)
                                          aCCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCAttt                                               >  1:2049629/1‑93 (MQ=255)
                                           ccGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTc                                              <  1:2392930/93‑1 (MQ=255)
                                           ccGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTc                                              <  1:2243347/93‑1 (MQ=255)
                                            cggcggTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCa                                             <  1:1955939/93‑1 (MQ=255)
                                               cggTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGa                                          <  2:53765/93‑1 (MQ=255)
                                               cggTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGa                                          <  2:33240/93‑1 (MQ=255)
                                                ggTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACACACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGAc                                         <  2:4622398/93‑1 (MQ=255)
                                                   gAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGcc                                      >  1:3557357/1‑93 (MQ=255)
                                                      ggTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCaaa                                   <  2:3729079/93‑1 (MQ=255)
                                                      ggTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCaaa                                   <  2:3575674/93‑1 (MQ=255)
                                                       gTTTCCATTTGTCCCCACGGGATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAg                                  >  2:2411850/1‑93 (MQ=255)
                                                       gTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAg                                  >  1:2615541/1‑93 (MQ=255)
                                                       gTTTCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAg                                  >  2:2339815/1‑93 (MQ=255)
                                                        tttCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgc                                 <  1:807025/93‑1 (MQ=255)
                                                        tttCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgc                                 <  1:473328/93‑1 (MQ=255)
                                                         ttCCATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgcc                                <  2:1951476/93‑1 (MQ=255)
                                                           ccATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgccgc                              >  2:2462989/1‑93 (MQ=255)
                                                            cATTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgccgct                             >  1:457704/1‑93 (MQ=255)
                                                             aTTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgccgctg                            <  2:590003/93‑1 (MQ=255)
                                                             aTTTGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgccgctg                            >  1:3465796/1‑93 (MQ=255)
                                                              tttGTCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgccgctgc                           >  2:4049178/1‑93 (MQ=255)
                                                                 ttCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgccgctgccgc                        <  2:1197550/92‑1 (MQ=255)
                                                                  tCCCCACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAgccgctgccgct                       >  1:3910670/1‑93 (MQ=255)
                                                                    cccACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGt                     <  1:2169809/93‑1 (MQ=255)
                                                                    cccACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGt                     >  2:1350360/1‑93 (MQ=255)
                                                                    cccACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGt                     <  2:720900/93‑1 (MQ=255)
                                                                     ccACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTa                    >  1:3902128/1‑93 (MQ=255)
                                                                     ccACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTa                    <  2:2111058/93‑1 (MQ=255)
                                                                     ccACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTa                    >  1:3497056/1‑93 (MQ=255)
                                                                     ccACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTa                    <  2:2111059/93‑1 (MQ=255)
                                                                     ccACGGAATAAACACACCGACAAACATCTGCAACACCACCAGCTGCTTCAGGCTGATACCCCATTTCATGACGCCAAAGCAGATGCCGCTGTa                    >  2:2624981/1‑93 (MQ=255)
                                                                      cACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTAt                   >  2:1410742/1‑93 (MQ=255)
                                                                      cACGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTAt                   <  1:429569/93‑1 (MQ=255)
                                                                        cGGAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTc                 <  1:1995611/93‑1 (MQ=255)
                                                                         ggAATAAACACCCCGACGAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCa                >  1:4135515/1‑93 (MQ=255)
                                                                         ggAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCa                >  2:316085/1‑93 (MQ=255)
                                                                         ggAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCa                >  2:3899108/1‑93 (MQ=255)
                                                                          gAATAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCag               >  1:1586959/1‑93 (MQ=255)
                                                                           aaTAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCaga              >  2:1282428/1‑93 (MQ=255)
                                                                           aaTAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCaga              >  2:4261767/1‑93 (MQ=255)
                                                                            aTAAACACCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCagag             >  2:3441045/1‑93 (MQ=255)
                                                                                acacCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCAGAGAGCg         >  2:3366676/1‑93 (MQ=255)
                                                                                acacCCCGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGGATTCAGAGAGCg         >  2:2165938/1‑93 (MQ=255)
                                                                                    cccGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCAGAGAGCGGGcc     <  1:4403961/93‑1 (MQ=255)
                                                                                     ccGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCAGAGAGCGGGCCt    >  1:1870952/1‑93 (MQ=255)
                                                                                     ccGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCAGAGAGCGGGCCt    >  1:3722660/1‑93 (MQ=255)
                                                                                     ccGACAAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGACGCTGCCGATGTATTCAGAGAGCGGGCCt    >  2:4223149/1‑93 (MQ=255)
                                                                                       gacaaACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCAGAGAGCGGGCCTTc  >  1:904456/1‑93 (MQ=255)
                                                                                          |                                                                                         
CACCAGTTTTACGATGGCAATCACCAGCGCCAGCAGCAGTCCACCGGCGGTGAAGGTTTCCATTTGTCCCCACGGAATAAACACCCCGACGAACATCTGCAACACCACCAGCTGTTTCAGGCTGATACCCCATTTCATGACGCCAAAGCCGCTGCCGCTGTATTCAGAGAGCGGGCCTTC  >  NC_000913/2844641‑2844820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: