BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,922,447	T→C	intergenic (‑312/+310)	b2792 ← / ← syd	hypothetical protein/Syd

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,922,447	0	T	C	99.5%	635.8 / ‑4.8	199	intergenic (‑312/+310)	b2792/syd	hypothetical protein/Syd
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (106/92); total (106/93)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.95e-01

Only 100 of 200 total aligned reads displayed.

TCCCTGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTTCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAC  >  NC_000913/2922357‑2922535

  ccTGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCt                                                                                      <  2:2151893/93‑1 (MQ=255)

  ccTGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCt                                                                                      >  1:3780640/1‑93 (MQ=255)

  ccTGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCt                                                                                      >  2:2997555/1‑93 (MQ=255)

  ccTGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCt                                                                                      >  2:1259313/1‑93 (MQ=255)

   cTGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCtt                                                                                     >  2:1134798/1‑93 (MQ=255)

    tGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTc                                                                                    >  1:3500293/1‑93 (MQ=255)

    tGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTc                                                                                    >  2:4676685/1‑93 (MQ=255)

    tGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTc                                                                                    >  1:731034/1‑93 (MQ=255)

     ggCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCa                                                                                   >  2:1509915/1‑93 (MQ=255)

      gCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCAt                                                                                  >  1:1503016/1‑93 (MQ=255)

        cTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATcc                                                                                <  2:3848201/93‑1 (MQ=255)

        cTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATcc                                                                                <  1:826806/93‑1 (MQ=255)

        cTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATcc                                                                                >  2:4464339/1‑93 (MQ=255)

         ttCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCa                                                                               >  1:2238622/1‑93 (MQ=255)

         ttCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCa                                                                               <  1:2286534/93‑1 (MQ=255)

          tCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAg                                                                              <  1:84017/93‑1 (MQ=255)

           ccTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGa                                                                             <  1:2331202/93‑1 (MQ=255)

            cTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGaa                                                                            <  2:3738777/93‑1 (MQ=255)

               aCCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGcc                                                                         >  1:3092505/1‑93 (MQ=255)

                 ccACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCtt                                                                       <  1:287238/93‑1 (MQ=255)

                 ccACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCtt                                                                       >  1:3342447/1‑93 (MQ=255)

                  cACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCttt                                                                      <  2:3286618/93‑1 (MQ=255)

                   aCCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCAGCTTCATCCAGAAGCCTTTc                                                                     >  2:3181003/1‑93 (MQ=255)

                     cGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTccc                                                                   >  2:2108357/1‑93 (MQ=255)

                        atcatcCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGa                                                                >  2:717478/1‑93 (MQ=255)

                         tcatcCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGaa                                                               >  1:4182063/1‑93 (MQ=255)

                           atcCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAac                                                             >  2:1725302/1‑93 (MQ=255)

                           atcCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAac                                                             >  2:4536473/1‑93 (MQ=255)

                           atcCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAac                                                             <  1:553060/93‑1 (MQ=255)

                           atcCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAac                                                             >  1:2340125/1‑93 (MQ=255)

                               tGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCa                                                         <  2:2899835/93‑1 (MQ=255)

                               tGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCa                                                         <  2:1525209/93‑1 (MQ=255)

                               tGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCa                                                         >  2:4074707/1‑93 (MQ=255)

                               tGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCa                                                         <  2:3041593/93‑1 (MQ=255)

                                gACCGGTTCTCATTCTCCATCCTGGAGGAGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGACACACCAt                                                        >  1:2353321/1‑93 (MQ=255)

                                gACCGGTTCTCAGTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCAt                                                        <  2:1514540/93‑1 (MQ=255)

                                  ccGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATcc                                                      <  1:3972365/93‑1 (MQ=255)

                                  ccGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATcc                                                      <  2:1989819/93‑1 (MQ=255)

                                  ccGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATcc                                                      <  2:2717426/93‑1 (MQ=255)

                                     gTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTgg                                                   <  2:1016156/93‑1 (MQ=255)

                                     gTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTgg                                                   <  1:4682728/93‑1 (MQ=255)

                                      ttCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTggc                                                  >  1:15492/1‑92 (MQ=255)

                                      ttCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGgt                                                  <  2:346825/93‑1 (MQ=255)

                                      ttCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGgt                                                  >  1:4495124/1‑93 (MQ=255)

                                       tctcATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGgtg                                                 <  2:3141658/93‑1 (MQ=255)

                                       tctcATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGgtg                                                 >  1:1350086/1‑93 (MQ=255)

                                        ctcATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGgtgt                                                >  1:4162843/1‑93 (MQ=255)

                                        ctcATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGgtgt                                                >  2:2260889/1‑93 (MQ=255)

                                         tcATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGgtgtg                                               >  2:4585115/1‑93 (MQ=255)

                                            ttCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTcc                                            >  1:3597291/1‑93 (MQ=255)

                                            ttCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTcc                                            <  1:186207/93‑1 (MQ=255)

                                            ttCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTcc                                            >  2:1181169/1‑93 (MQ=255)

                                            ttCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGAGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTcc                                            >  2:2059988/1‑93 (MQ=255)

                                             tctcCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCt                                           <  2:364393/93‑1 (MQ=255)

                                               tcCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGc                                         >  1:660137/1‑93 (MQ=255)

                                               tcCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGc                                         <  1:3327205/93‑1 (MQ=255)

                                                 cATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTTCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAg                                       <  2:2521403/93‑1 (MQ=255)

                                                   tCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGaa                                     >  1:4538953/1‑93 (MQ=255)

                                                   tCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGaa                                     <  1:2004371/93‑1 (MQ=255)

                                                    ccTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAg                                    <  1:3223934/93‑1 (MQ=255)

                                                     cTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAgt                                   <  1:4070887/93‑1 (MQ=255)

                                                       ggAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAgtgt                                 <  1:1750965/93‑1 (MQ=255)

                                                        gAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGtc                                <  2:354507/93‑1 (MQ=255)

                                                         aGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGtca                               <  2:2856502/93‑1 (MQ=255)

                                                         aGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGtca                               <  1:1125450/93‑1 (MQ=255)

                                                         aGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGtca                               <  1:2144083/93‑1 (MQ=255)

                                                         aGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGtca                               >  1:1081051/1‑93 (MQ=255)

                                                          ggTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGtcat                              >  1:1493341/1‑93 (MQ=255)

                                                          ggTGTCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGtcat                              >  2:4526231/1‑93 (MQ=255)

                                                              tCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCatcatc                          <  1:145165/93‑1 (MQ=255)

                                                              tCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCatcatc                          <  1:3070787/93‑1 (MQ=255)

                                                              tCCTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCatcatc                          >  1:370287/1‑93 (MQ=255)

                                                                cTTTAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCt                        >  2:3232259/1‑93 (MQ=255)

                                                                 tttAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTg                       >  1:4591779/1‑93 (MQ=255)

                                                                 tttAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCAACCTGGTGTGTCCTGCAGAAGTGTCATCATCCTg                       >  2:744429/1‑93 (MQ=255)

                                                                  ttAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGa                      <  1:1644237/93‑1 (MQ=255)

                                                                  ttAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGa                      <  1:796480/93‑1 (MQ=255)

                                                                  ttAACGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGa                      >  2:3767368/1‑93 (MQ=255)

                                                                    aaCGCGTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATg                    >  2:4214180/1‑93 (MQ=255)

                                                                      cgcgTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGtt                  <  2:3899289/93‑1 (MQ=255)

                                                                       gcgTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTc                 <  1:4375452/93‑1 (MQ=255)

                                                                       gcgTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTc                 <  1:2393176/93‑1 (MQ=255)

                                                                        cgTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCa                <  1:2964877/93‑1 (MQ=255)

                                                                         gTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCAc               <  1:4676685/93‑1 (MQ=255)

                                                                         gTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCAc               >  2:4620164/1‑93 (MQ=255)

                                                                         gTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCAc               >  1:191130/1‑93 (MQ=255)

                                                                         gTCCTGCGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCAc               <  1:401529/93‑1 (MQ=255)

                                                                               cGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt         <  1:2056778/93‑1 (MQ=255)

                                                                               cGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt         <  2:600685/93‑1 (MQ=255)

                                                                               cGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt         <  2:4409952/93‑1 (MQ=255)

                                                                               cGTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGtt         <  2:115917/93‑1 (MQ=255)

                                                                                gTCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGttt        >  2:902523/1‑92 (MQ=255)

                                                                                 tCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGt       >  1:1207259/1‑93 (MQ=255)

                                                                                 tCATCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGt       >  1:2462568/1‑93 (MQ=255)

                                                                                   aTCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCt     <  2:4024810/93‑1 (MQ=255)

                                                                                   aTCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCt     >  2:49879/1‑93 (MQ=255)

                                                                                    tCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTg    >  2:39998/1‑93 (MQ=255)

                                                                                    tCCTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTg    >  2:2073135/1‑93 (MQ=255)

                                                                                     ccTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGa   <  1:3638218/93‑1 (MQ=255)

                                                                                     ccTCTCCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGa   >  2:2312972/1‑93 (MQ=255)

TCCCTGGCCTTCCTGACCCACCGAATCATCCTGACCGGTTCTCATTCTCCATCCTGGAGGTGTCCTTTAACGCGTCCTGCGTCATCCTCTTCGCTTCATCCAGAAGCCTTTCCCTGAAACACCATCCTGGTGTGTCCTGCAGAAGTGTCATCATCCTGATGTTCACTTCGTTGTCTGAC  >  NC_000913/2922357‑2922535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`