BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,940,536	T→C	A18A (GCA→GCG)	gcvA ←	GcvA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,940,536	0	T	C	99.4%	532.3 / NA	171	A18A (GCA→GCG)	gcvA	GcvA
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (78/92); total (78/93)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 185 total aligned reads displayed.

AAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAT  >  NC_000913/2940447‑2940625

aaaaaaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGcgct                                                                                        >  1:4129378/1‑93 (MQ=255)

  aaaaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGcgctgc                                                                                      >  1:1961040/1‑93 (MQ=255)

  aaaaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGcgctgc                                                                                      <  1:3700842/93‑1 (MQ=255)

   aaaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCg                                                                                     >  1:3089067/1‑93 (MQ=255)

    aaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCgg                                                                                    >  1:711779/1‑93 (MQ=255)

    aaTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGGGAAACTTAAATGGCGCGCTGCgg                                                                                    >  2:2262719/1‑93 (MQ=255)

     aTCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGc                                                                                   >  1:147860/1‑93 (MQ=255)

      tCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCa                                                                                  <  2:2013481/93‑1 (MQ=255)

      tCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCa                                                                                  <  2:1718588/93‑1 (MQ=255)

      tCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCa                                                                                  <  1:4207737/93‑1 (MQ=255)

         tCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCa                                                                               <  1:992938/93‑1 (MQ=255)

          cAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATcta                                                                              >  1:1516039/1‑91 (MQ=255)

          cAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaa                                                                              >  1:347510/1‑93 (MQ=255)

             gagaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaaa                                                                           <  1:1032747/93‑1 (MQ=255)

             gagaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaaa                                                                           <  2:1762079/93‑1 (MQ=255)

             gagaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCaaaaa                                                                           >  2:504569/1‑93 (MQ=255)

               gaCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTTCGGCATCAAAAACt                                                                         >  1:2106433/1‑93 (MQ=255)

                aCTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTc                                                                        >  2:2518610/1‑93 (MQ=255)

                 cTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCg                                                                       <  2:2493510/93‑1 (MQ=255)

                 cTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCg                                                                       >  1:3510548/1‑93 (MQ=255)

                  ttgatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGt                                                                      >  1:3404387/1‑93 (MQ=255)

                   tgatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTa                                                                     <  2:3184411/93‑1 (MQ=255)

                    gatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTaa                                                                    >  1:1260210/1‑93 (MQ=255)

                    gatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTaa                                                                    <  1:1474/93‑1 (MQ=255)

                    gatttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGCGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTaa                                                                    >  2:1552762/1‑93 (MQ=255)

                      tttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAgg                                                                  <  1:272142/93‑1 (MQ=255)

                       ttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGc                                                                 <  1:2547690/93‑1 (MQ=255)

                       ttgatGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGc                                                                 >  1:4334529/1‑93 (MQ=255)

                         gatgaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCAt                                                               >  2:1217945/1‑93 (MQ=255)

                         gatgaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCAt                                                               >  1:3793978/1‑93 (MQ=255)

                          atgaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCAtt                                                              <  2:1889694/93‑1 (MQ=255)

                           tgaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCAttt                                                             >  2:555938/1‑93 (MQ=255)

                           tgaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCAttt                                                             >  1:4337864/1‑93 (MQ=255)

                            gaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTa                                                            >  2:3817979/1‑93 (MQ=255)

                            gaCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTa                                                            <  2:3900024/93‑1 (MQ=255)

                             aCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAg                                                           >  2:2059632/1‑93 (MQ=255)

                             aCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAg                                                           >  2:723656/1‑93 (MQ=255)

                             aCTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAg                                                           <  2:4414115/93‑1 (MQ=255)

                              cTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGc                                                          <  2:2859240/93‑1 (MQ=255)

                              cTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTCAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGc                                                          <  1:2516397/93‑1 (MQ=255)

                                 aCTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggt                                                       >  2:2753066/1‑93 (MQ=255)

                                 aCTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggt                                                       <  2:1082642/93‑1 (MQ=255)

                                 aCTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggt                                                       <  2:671084/93‑1 (MQ=255)

                                  cTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggtg                                                      >  2:2048049/1‑93 (MQ=255)

                                   tGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggtgg                                                     >  1:4540177/1‑93 (MQ=255)

                                   tGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggtgg                                                     <  2:2621913/93‑1 (MQ=255)

                                   tGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggtgg                                                     >  1:2797144/1‑93 (MQ=255)

                                    gCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCggtggt                                                    <  2:3866203/93‑1 (MQ=255)

                                      ggCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTaa                                                  <  2:1628804/93‑1 (MQ=255)

                                       gCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAt                                                 <  2:542897/93‑1 (MQ=255)

                                       gCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAAt                                                 <  2:772900/93‑1 (MQ=255)

                                         ttGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCg                                               >  2:1993339/1‑93 (MQ=255)

                                         ttGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCg                                               >  2:3023174/1‑93 (MQ=255)

                                         ttGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCg                                               >  2:4038429/1‑93 (MQ=255)

                                            ggTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGttt                                            <  1:580038/93‑1 (MQ=255)

                                            ggTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGttt                                            >  2:4516780/1‑93 (MQ=255)

                                             gTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTa                                           >  2:3110545/1‑93 (MQ=255)

                                             gTCACAAAAAGCTCTTCTGCTGCGCGAGGGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTa                                           >  2:3420050/1‑93 (MQ=255)

                                               cacaAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGa                                         <  2:2939859/93‑1 (MQ=255)

                                               cacaAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGa                                         <  2:896883/93‑1 (MQ=255)

                                                acaAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGAc                                        >  2:733610/1‑93 (MQ=255)

                                                 caAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACa                                       >  1:1013731/1‑93 (MQ=255)

                                                  aaaaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACAt                                      <  1:2155769/93‑1 (MQ=255)

                                                   aaaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATg                                     <  2:3484427/93‑1 (MQ=255)

                                                    aaaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATgg                                    <  1:3396915/93‑1 (MQ=255)

                                                     aaGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGc                                   >  1:2728493/1‑93 (MQ=255)

                                                      aGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCt                                  >  1:4573303/1‑93 (MQ=255)

                                                       gCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTa                                 <  1:3873620/93‑1 (MQ=255)

                                                        ctctTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAt                                <  1:605087/93‑1 (MQ=255)

                                                        ctctTCTGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAt                                <  2:4328119/93‑1 (MQ=255)

                                                         tcttctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAtt                               >  2:124295/1‑93 (MQ=255)

                                                         tcttctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTAtt                               >  2:3143785/1‑93 (MQ=255)

                                                          cttctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTa                              >  1:3494373/1‑93 (MQ=255)

                                                           ttctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTaa                             <  2:2368586/93‑1 (MQ=255)

                                                            tctGCTGCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTaaa                            >  2:3944571/1‑93 (MQ=255)

                                                             ctgctgCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAAc                           <  2:127433/93‑1 (MQ=255)

                                                             ctgctgCGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAAc                           >  1:3034656/1‑93 (MQ=255)

                                                              tgctgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACt                          >  2:3633516/1‑93 (MQ=255)

                                                               gctgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACtt                         <  1:1129413/93‑1 (MQ=255)

                                                                 tgcGCGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTg                       >  2:2465893/1‑93 (MQ=255)

                                                                  gcgcGAGTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGa                      <  2:3327127/93‑1 (MQ=255)

                                                                  gcgcGAGTGAAACTTAAATGGCGCGCTGCGACATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGa                      <  2:3438802/93‑1 (MQ=255)

                                                                        gTGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaa                <  1:356056/93‑1 (MQ=255)

                                                                         tGAAACTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTaaa               >  1:48606/1‑93 (MQ=255)

                                                                            aaCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGa            >  2:218066/1‑93 (MQ=255)

                                                                            aaCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGa            >  1:4617978/1‑93 (MQ=255)

                                                                            aaCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGa            <  1:3205711/93‑1 (MQ=255)

                                                                            aaCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGa            >  1:1615661/1‑93 (MQ=255)

                                                                            aaCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGa            >  1:2579257/1‑93 (MQ=255)

                                                                             aCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGaa           <  2:3260167/93‑1 (MQ=255)

                                                                             aCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGaa           <  1:1277397/93‑1 (MQ=255)

                                                                             aCTTAAATGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGaa           >  2:1403453/1‑93 (MQ=255)

                                                                                  aaTGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTaa      >  2:1967260/1‑93 (MQ=255)

                                                                                   aTGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAAc     <  2:1447433/93‑1 (MQ=255)

                                                                                    tGGCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACa    >  2:1850651/1‑93 (MQ=255)

                                                                                     ggCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACaa   <  2:284597/93‑1 (MQ=255)

                                                                                     ggCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACaa   <  1:4641702/93‑1 (MQ=255)

                                                                                     ggCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACaa   <  2:1533213/93‑1 (MQ=255)

                                                                                     ggCGCGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTAGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACaa   <  1:1441126/93‑1 (MQ=255)

                                                                                      gcgcgcTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAt  <  2:3537453/93‑1 (MQ=255)

AAAAAATCCTCAAGAGACTTGATTTGATGACTTACTGCGGCTTGGGTCACAAAAAGCTCTTCTGCTGCGCGAGTGAAACTTAAATGGCGTGCTGCGGCATCAAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAAT  >  NC_000913/2940447‑2940625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`