BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,971,616	A→G	L90P (CTG→CCG)	ygeD ←	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,971,616	0	A	G	100.0%	486.6 / NA	155	L90P (CTG→CCG)	ygeD	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (80/75); total (80/75)

Only 100 of 165 total aligned reads displayed.

TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA  >  NC_000913/2971527‑2971705

tCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCt                                                                                        <  1:4207940/93‑1 (MQ=255)

 cGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCtt                                                                                       >  1:2925644/1‑93 (MQ=255)

   ccGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa                                                                                     <  1:262460/93‑1 (MQ=255)

   ccGGTGAATAGCCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa                                                                                     <  2:2919173/93‑1 (MQ=255)

   ccGGTAAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa                                                                                     <  2:4219292/93‑1 (MQ=255)

    cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAg                                                                                    >  2:1633490/1‑93 (MQ=255)

    cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAg                                                                                    >  1:1706203/1‑93 (MQ=255)

       tGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGcc                                                                                 >  2:1884380/1‑93 (MQ=255)

       tGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGcc                                                                                 <  1:840137/93‑1 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCCGGCCg                                                                                >  2:374935/1‑93 (MQ=255)

          aTAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGtt                                                                              <  1:659011/93‑1 (MQ=255)

          aTAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGtt                                                                              <  2:4148572/93‑1 (MQ=255)

          aTAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGtt                                                                              >  2:4251904/1‑93 (MQ=255)

           tAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTg                                                                             >  2:2154408/1‑93 (MQ=255)

               cTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGCTGGcga                                                                         >  1:1411282/1‑91 (MQ=255)

                tGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCaaa                                                                        >  2:3989290/1‑93 (MQ=255)

                tGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCaaa                                                                        <  1:3064854/93‑1 (MQ=255)

                 gcagcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAc                                                                       <  2:1169588/93‑1 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatc                                                                    >  2:3589075/1‑93 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatc                                                                    <  1:1512509/93‑1 (MQ=255)

                      aCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatcat                                                                  >  2:3635914/1‑93 (MQ=255)

                       ccAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCCGGCCGTTGGGAAACatcatc                                                                 >  1:1959404/1‑93 (MQ=255)

                       ccAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACatcatc                                                                 >  1:3735378/1‑93 (MQ=255)

                       ccAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACatcatc                                                                 <  1:4667594/93‑1 (MQ=255)

                          acacCCACCAGCGTATAGCTGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAcc                                                              <  2:4036068/93‑1 (MQ=255)

                          acacCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAcc                                                              >  2:3515511/1‑93 (MQ=255)

                          acacCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAcc                                                              <  2:3693559/93‑1 (MQ=255)

                           cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAccc                                                             <  2:709505/93‑1 (MQ=255)

                           cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAccc                                                             >  2:998783/1‑93 (MQ=255)

                            acccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACCTCATCACCCg                                                            >  2:1205334/1‑93 (MQ=255)

                             cccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCgg                                                           >  1:1210233/1‑93 (MQ=255)

                             cccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCgg                                                           <  1:4349989/93‑1 (MQ=255)

                              ccaccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGc                                                          <  1:375913/93‑1 (MQ=255)

                                 ccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCtt                                                       <  1:3650854/93‑1 (MQ=255)

                                 ccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCtt                                                       <  2:2214188/93‑1 (MQ=255)

                                  caGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCttt                                                      <  1:3709586/93‑1 (MQ=255)

                                  caGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCttt                                                      <  1:2373846/93‑1 (MQ=255)

                                  caGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCttt                                                      >  1:4607034/1‑93 (MQ=255)

                                    gCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg                                                    >  1:1085917/1‑93 (MQ=255)

                                    gCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg                                                    <  2:2335376/93‑1 (MQ=255)

                                     cGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGc                                                   <  2:1207202/93‑1 (MQ=255)

                                       tataGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGa                                                 >  2:3625355/1‑93 (MQ=255)

                                       tataGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGa                                                 >  1:886140/1‑93 (MQ=255)

                                        ataGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGaa                                                <  1:205477/93‑1 (MQ=255)

                                          aGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGc                                              <  1:1005054/93‑1 (MQ=255)

                                           gCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCt                                             <  2:2116979/93‑1 (MQ=255)

                                            ccGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTa                                            <  2:2852611/93‑1 (MQ=255)

                                              gagaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATc                                          <  2:386611/93‑1 (MQ=255)

                                              gagaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATc                                          >  2:3320268/1‑93 (MQ=255)

                                              gagaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATc                                          <  2:1453166/93‑1 (MQ=255)

                                               agaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATcc                                         <  1:3995766/93‑1 (MQ=255)

                                               agaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATcc                                         <  1:3027396/93‑1 (MQ=255)

                                                  aaCGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCcccc                                      >  1:2851827/1‑93 (MQ=255)

                                                  aaCGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGcc                                      <  1:985018/93‑1 (MQ=255)

                                                     ggATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAcc                                   <  2:4483390/93‑1 (MQ=255)

                                                     ggATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAcc                                   >  2:153738/1‑93 (MQ=255)

                                                      gATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTTGCGAAGCTATCCGCCCCCt                                  >  2:1969014/1‑93 (MQ=255)

                                                      gATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCATCt                                  >  2:4482279/1‑93 (MQ=255)

                                                      gATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCt                                  >  1:1761951/1‑93 (MQ=255)

                                                      gATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCt                                  >  2:2399496/1‑93 (MQ=255)

                                                      gATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCt                                  >  2:678817/1‑93 (MQ=255)

                                                       aTTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTg                                 >  1:237623/1‑93 (MQ=255)

                                                          gATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACACGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              >  2:2027951/1‑93 (MQ=255)

                                                          aaTACCAAAGCAGATACTGTCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              <  2:2973466/92‑1 (MQ=255)

                                                           aTACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCg                             >  1:4441725/1‑93 (MQ=255)

                                                           aTACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCg                             >  1:3518637/1‑93 (MQ=255)

                                                            tACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGa                            >  1:3219412/1‑93 (MQ=255)

                                                              ccAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACa                          <  1:303163/93‑1 (MQ=255)

                                                               cAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACac                         >  1:4066196/1‑92 (MQ=255)

                                                               cAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaa                         <  2:4415677/93‑1 (MQ=255)

                                                               cAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaa                         >  2:2377044/1‑93 (MQ=255)

                                                                aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa                        <  1:2474631/93‑1 (MQ=255)

                                                                  aGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACg                      >  1:2153970/1‑93 (MQ=255)

                                                                     aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg                   <  2:792355/93‑1 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  2:1832657/1‑93 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  2:658009/1‑93 (MQ=255)

                                                                        tACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaa                >  1:11668/1‑93 (MQ=255)

                                                                          cTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaa              <  1:3837639/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             >  1:3245150/1‑93 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  1:2597752/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  2:2789702/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             >  2:2555491/1‑93 (MQ=255)

                                                                            ggCTCCGCCCAGCGGCTTCAGCCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAg            <  2:201502/93‑1 (MQ=255)

                                                                             gCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGa           <  2:2147573/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          <  1:4669680/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          <  2:2298959/93‑1 (MQ=255)

                                                                               tGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAAt         <  1:2934881/93‑1 (MQ=255)

                                                                               cgcgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAAt         <  2:983970/92‑1 (MQ=255)

                                                                                gcgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATg        <  1:354976/93‑1 (MQ=255)

                                                                                gcgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATg        >  2:3270209/1‑93 (MQ=255)

                                                                                gcgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATg        <  1:4569330/93‑1 (MQ=255)

                                                                                 cgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGt       <  2:4540422/93‑1 (MQ=255)

                                                                                  gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAGGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa      <  1:3299710/93‑1 (MQ=255)

                                                                                  gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa      <  1:3754654/93‑1 (MQ=255)

                                                                                  gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa      <  2:3018740/93‑1 (MQ=255)

                                                                                    ccAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGGGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAg    >  2:1222306/1‑93 (MQ=255)

                                                                                    ccAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAg    <  1:3049062/93‑1 (MQ=255)

                                                                                     cagcggCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGc   >  1:727604/1‑93 (MQ=255)

                                                                                      agcggcTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCa  >  1:4639986/1‑93 (MQ=255)

                                                                                      agcggcTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCa  <  1:75897/93‑1 (MQ=255)

TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA  >  NC_000913/2971527‑2971705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`