BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,999,913	C→T	A516V (GCC→GTC)	b2866 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,999,913	0	C	T	100.0%	691.8 / NA	191	A516V (GCC→GTC)	b2866	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (100/91); total (100/91)

Only 100 of 195 total aligned reads displayed.

TGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGC  >  NC_000913/2999823‑3000002

tggCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCt                                                                                         >  1:2123775/1‑93 (MQ=255)

tggCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCt                                                                                         <  2:3254831/93‑1 (MQ=255)

 ggCAGAAACCGTGGGGGTTCCGGTCAGCGACGTCCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGtctc                                                                                        <  1:4613050/93‑1 (MQ=255)

  gCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCa                                                                                       >  1:4044514/1‑93 (MQ=255)

    aGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGACACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACg                                                                                     <  2:4286427/93‑1 (MQ=255)

     gAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGc                                                                                    >  2:130132/1‑93 (MQ=255)

     gAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGc                                                                                    <  2:2689259/93‑1 (MQ=255)

     gAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGc                                                                                    >  1:3239945/1‑93 (MQ=255)

      aaaCCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGcc                                                                                   <  1:1266912/93‑1 (MQ=255)

         ccGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCCTATGTCTCAGGCCaga                                                                                >  2:1893294/1‑93 (MQ=255)

         ccGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCaga                                                                                <  1:843718/93‑1 (MQ=255)

         ccGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCaga                                                                                <  2:671942/93‑1 (MQ=255)

          cGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCagag                                                                               >  1:3532424/1‑93 (MQ=255)

           gTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGc                                                                              >  1:1086918/1‑93 (MQ=255)

            tGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCt                                                                             >  2:3327329/1‑93 (MQ=255)

               gggTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATg                                                                          <  2:590785/93‑1 (MQ=255)

                 gTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGtt                                                                        <  1:1012156/93‑1 (MQ=255)

                 gTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGtt                                                                        <  2:2507183/93‑1 (MQ=255)

                   tCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGc                                                                      <  2:1019472/93‑1 (MQ=255)

                   tCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGc                                                                      <  2:907626/93‑1 (MQ=255)

                    ccGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGcc                                                                     <  2:3955800/93‑1 (MQ=255)

                     cGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCcg                                                                    >  1:3560423/1‑93 (MQ=255)

                      ggTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCcgc                                                                   <  2:3669157/93‑1 (MQ=255)

                        tCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCgcgc                                                                 >  1:497281/1‑93 (MQ=255)

                        tCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCgcgc                                                                 >  2:1462325/1‑93 (MQ=255)

                           gCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctg                                                              <  2:2471151/93‑1 (MQ=255)

                             gACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCcttcg                                                            >  1:3203682/1‑93 (MQ=255)

                             gACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGACGCGCctgcg                                                            >  2:3596884/1‑93 (MQ=255)

                              aCGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgc                                                           <  1:3056472/93‑1 (MQ=255)

                              aCGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgc                                                           >  1:2962981/1‑93 (MQ=255)

                               cGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgct                                                          >  1:4676000/1‑93 (MQ=255)

                                gTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgctg                                                         >  1:3840976/1‑93 (MQ=255)

                                 ttCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgctgc                                                        >  2:4613392/1‑93 (MQ=255)

                                  tCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCctgcgctgcg                                                       >  1:2745989/1‑93 (MQ=255)

                                   cgcgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCtgcgctgcgc                                                      >  1:4282403/1‑93 (MQ=255)

                                    gcgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCa                                                     >  2:3289412/1‑93 (MQ=255)

                                     cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg                                                    <  1:2354903/93‑1 (MQ=255)

                                     cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg                                                    <  1:4514334/93‑1 (MQ=255)

                                     cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg                                                    >  2:4400584/1‑93 (MQ=255)

                                     cgTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAg                                                    <  2:3102278/93‑1 (MQ=255)

                                      gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCCGt                                                   >  2:986568/1‑93 (MQ=255)

                                      gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGt                                                   >  1:3326386/1‑93 (MQ=255)

                                      gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGt                                                   >  2:3175383/1‑93 (MQ=255)

                                      gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGt                                                   <  2:3869414/93‑1 (MQ=255)

                                      gTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGACGCGCCTGCGCTGCGCAGt                                                   >  2:1081020/1‑93 (MQ=255)

                                       ttATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTg                                                  >  2:2246620/1‑93 (MQ=255)

                                         aTTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCg                                                >  2:643920/1‑93 (MQ=255)

                                          tttCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCgg                                               <  2:371543/93‑1 (MQ=255)

                                          tttCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCgg                                               >  1:4214952/1‑93 (MQ=255)

                                            tCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCa                                             >  2:2070729/1‑93 (MQ=255)

                                              aaCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACt                                           >  1:2155467/1‑93 (MQ=255)

                                               aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta                                          >  1:3695045/1‑93 (MQ=255)

                                               aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta                                          >  2:2727960/1‑93 (MQ=255)

                                               aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta                                          >  2:2420311/1‑93 (MQ=255)

                                               aCTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACta                                          <  1:3992103/93‑1 (MQ=255)

                                                cTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtat                                         >  2:3833346/1‑93 (MQ=255)

                                                cTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtat                                         <  2:4100367/93‑1 (MQ=255)

                                                 tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt                                        >  1:1934022/1‑93 (MQ=255)

                                                 tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt                                        >  2:1205237/1‑93 (MQ=255)

                                                 tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt                                        <  1:1729423/93‑1 (MQ=255)

                                                 tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt                                        <  1:3753287/93‑1 (MQ=255)

                                                 tCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatt                                        >  2:553295/1‑93 (MQ=255)

                                                  cAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtatta                                       >  2:217588/1‑93 (MQ=255)

                                                   aaGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGNTGCGCAGTGCGGCACtattat                                      >  1:1928716/1‑93 (MQ=255)

                                                   aaGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACtattat                                      >  1:826254/1‑93 (MQ=255)

                                                    aGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTattatt                                     >  1:4181490/1‑93 (MQ=255)

                                                      aTACCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaa                                   >  2:386204/1‑93 (MQ=255)

                                                       tgccGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaaa                                  <  2:3875440/91‑1 (MQ=255)

                                                        aCCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaaaa                                 >  2:2130765/1‑93 (MQ=255)

                                                        aCCGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTaaaa                                 <  2:1679931/93‑1 (MQ=255)

                                                         ccGACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAag                                >  2:431932/1‑93 (MQ=255)

                                                           gACGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAagag                              >  1:2078338/1‑93 (MQ=255)

                                                            aCGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAgaga                             <  1:1282172/93‑1 (MQ=255)

                                                            aCGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAgaga                             <  1:4327115/93‑1 (MQ=255)

                                                            aCGTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAgaga                             >  2:1922709/1‑93 (MQ=255)

                                                              gTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGaaa                           <  2:803670/93‑1 (MQ=255)

                                                              gTTACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGaaa                           <  2:1648695/93‑1 (MQ=255)

                                                               ttACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAGGAGaaaa                          <  1:2326457/93‑1 (MQ=255)

                                                               ttACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGaaaa                          >  1:2251328/1‑93 (MQ=255)

                                                                tACGCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAat                         <  1:1427219/93‑1 (MQ=255)

                                                                  tgCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatca                       <  1:2405136/92‑1 (MQ=255)

                                                                   gCCGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatcat                      <  2:869939/93‑1 (MQ=255)

                                                                    ccGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatcatc                     <  1:733899/93‑1 (MQ=255)

                                                                    ccGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAatcatc                     <  1:2199327/93‑1 (MQ=255)

                                                                     cGTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCg                    <  2:1954399/93‑1 (MQ=255)

                                                                      gTTCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGc                   <  1:45890/93‑1 (MQ=255)

                                                                        tCGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTc                 <  2:4378127/93‑1 (MQ=255)

                                                                         cGATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCa                <  2:258101/93‑1 (MQ=255)

                                                                          gATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAc               >  2:2896314/1‑93 (MQ=255)

                                                                          gATCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAc               <  2:3778687/93‑1 (MQ=255)

                                                                           aTCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAcg              <  2:344656/93‑1 (MQ=255)

                                                                           aTCCCGGCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCAcg              >  2:1102786/1‑93 (MQ=255)

                                                                                ggCGCATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCa         >  2:3213895/1‑93 (MQ=255)

                                                                                 gcgcATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAg        >  2:531287/1‑93 (MQ=255)

                                                                                   gcATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTc      >  2:768979/1‑93 (MQ=255)

                                                                                   gcATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTc      >  2:1746490/1‑93 (MQ=255)

                                                                                    cATTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCa     <  2:3015187/93‑1 (MQ=255)

                                                                                     aTTTGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCAt    <  2:498829/93‑1 (MQ=255)

                                                                                       ttGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCATGCCGCAGTCATGc  >  1:1552463/1‑93 (MQ=255)

                                                                                       ttGTCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGc  <  2:2346454/93‑1 (MQ=255)

TGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGC  >  NC_000913/2999823‑3000002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`