Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,027,430 A→G F513L (TTC→CTC)  ygfT ← putative oxidoreductase Fe‑S subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,027,4300AG98.8% 532.7 / ‑2.9 170F513L (TTC→CTC) ygfTputative oxidoreductase Fe‑S subunit
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (100/68);  total (101/69)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01

Only 100 of 177 total aligned reads displayed.

GCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCA  >  NC_000913/3027340‑3027519
                                                                                          |                                                                                         
gCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACt                                                                                         <  2:2765492/93‑1 (MQ=255)
gCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGATAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCt                                                                                         >  1:2510020/1‑93 (MQ=255)
  cccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGa                                                                                       >  2:2476041/1‑93 (MQ=255)
  cccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGa                                                                                       <  1:2857818/93‑1 (MQ=255)
   ccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaa                                                                                      >  2:3031493/1‑93 (MQ=255)
   ccGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaa                                                                                      >  1:341811/1‑93 (MQ=255)
    cGGCTCGCCCATGGCGGTACGAAACAGGCCCACCGCAATTAAACGCCCATTTTAGTCCCAAGGGATATATTGCGGTTGAACATTGAGCTGaaa                                                                                     <  1:3471851/93‑1 (MQ=255)
    cGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaaa                                                                                     <  1:3584612/93‑1 (MQ=255)
    cGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGaaa                                                                                     <  2:757299/93‑1 (MQ=255)
       cTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTc                                                                                  >  2:2900414/1‑93 (MQ=255)
       cTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTc                                                                                  <  1:557530/93‑1 (MQ=255)
        tCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCg                                                                                 >  1:3972385/1‑93 (MQ=255)
            ccATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGacac                                                                             >  2:1332387/1‑93 (MQ=255)
             cATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACAcc                                                                            <  2:1705746/93‑1 (MQ=255)
              aTGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCt                                                                           <  2:3864645/93‑1 (MQ=255)
                 gCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTcc                                                                        <  1:3481353/93‑1 (MQ=255)
                   ggTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTc                                                                      <  2:2853128/93‑1 (MQ=255)
                    gTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTcg                                                                     >  2:2683256/1‑93 (MQ=255)
                         aaTCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCgcgcgc                                                                <  1:2778850/93‑1 (MQ=255)
                          aTCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCa                                                               >  2:4182799/1‑93 (MQ=255)
                           tCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCgcgcgctt                                                              >  2:1435957/1‑91 (MQ=255)
                           tCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCAt                                                              >  1:1120647/1‑93 (MQ=255)
                             aGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTa                                                            <  2:2953378/93‑1 (MQ=255)
                              ggCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTaa                                                           <  2:3346130/93‑1 (MQ=255)
                                cccACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAacc                                                         <  1:2910308/93‑1 (MQ=255)
                                cccACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAacc                                                         >  2:2003473/1‑93 (MQ=255)
                                  cACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccac                                                       >  2:864700/1‑93 (MQ=255)
                                   cccGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc                                                      <  1:142607/92‑1 (MQ=255)
                                   aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc                                                      <  1:4022412/93‑1 (MQ=255)
                                   aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc                                                      >  2:1063165/1‑93 (MQ=255)
                                   aCCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAaccacc                                                      >  1:865141/1‑93 (MQ=255)
                                     cGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACctc                                                    <  2:957252/93‑1 (MQ=255)
                                     cGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACctc                                                    <  1:3219217/93‑1 (MQ=255)
                                     cGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACctc                                                    >  1:1786931/1‑93 (MQ=255)
                                       cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt                                                  <  1:1693782/93‑1 (MQ=255)
                                       cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt                                                  <  1:3208825/93‑1 (MQ=255)
                                       cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt                                                  <  1:2548744/93‑1 (MQ=255)
                                       cAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCtt                                                  <  1:2446876/93‑1 (MQ=255)
                                        aGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCttt                                                 <  2:190850/93‑1 (MQ=255)
                                         gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg                                                >  2:3877269/1‑93 (MQ=255)
                                         gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg                                                >  2:4499057/1‑93 (MQ=255)
                                         gTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTg                                                >  2:160560/1‑93 (MQ=255)
                                          ttAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTgc                                               <  1:3785761/93‑1 (MQ=255)
                                            aaaCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTgcgc                                             <  1:1878884/93‑1 (MQ=255)
                                            aaaCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACCCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTgcgc                                             <  1:3089152/93‑1 (MQ=255)
                                             aaCGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGcgcg                                            <  1:4201052/93‑1 (MQ=255)
                                                 cccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGcc                                        >  1:3079154/1‑93 (MQ=255)
                                                 cccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTATTTGCGCGAgtc                                        >  2:3508853/1‑91 (MQ=255)
                                                  ccATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg                                      >  1:1188196/1‑93 (MQ=255)
                                                   cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg                                      >  2:2345721/1‑93 (MQ=255)
                                                   cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg                                      >  2:2054227/1‑93 (MQ=255)
                                                   cATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCg                                      >  1:1398400/1‑93 (MQ=255)
                                                    aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg                                     >  2:3240892/1‑93 (MQ=255)
                                                    aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg                                     >  1:2202560/1‑93 (MQ=255)
                                                    aTCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCgg                                     <  1:1932556/93‑1 (MQ=255)
                                                     tCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGc                                    >  2:972297/1‑93 (MQ=255)
                                                     tCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGc                                    >  2:3719113/1‑93 (MQ=255)
                                                      tgtCGTCACAAGCGATATATTGCGGTTGACCATTGAGCTGAACCTCGACCCCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCa                                   <  2:1808863/91‑1 (MQ=255)
                                                      cTTCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCa                                   >  2:2043625/1‑93 (MQ=255)
                                                       ttCGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCAt                                  >  1:4653783/1‑93 (MQ=255)
                                                         cGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAc                                <  1:1260358/93‑1 (MQ=255)
                                                         cGTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATAc                                <  2:347403/93‑1 (MQ=255)
                                                          gTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACt                               <  1:600266/93‑1 (MQ=255)
                                                          gTCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACt                               >  2:3026284/1‑93 (MQ=255)
                                                           tCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTg                              >  2:3529884/1‑93 (MQ=255)
                                                           tCACAAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTg                              >  2:607670/1‑93 (MQ=255)
                                                            cacaAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGa                             <  1:2188751/93‑1 (MQ=255)
                                                            cacaAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTAGCGCGAGCCCGGCATACTGa                             >  1:3128053/1‑93 (MQ=255)
                                                             acaAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGAc                            <  2:1574703/93‑1 (MQ=255)
                                                              caAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACt                           >  1:4018089/1‑93 (MQ=255)
                                                              caAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACt                           >  2:4113188/1‑93 (MQ=255)
                                                              caAGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACt                           >  2:2106824/1‑93 (MQ=255)
                                                               aaGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACtt                          >  1:3641537/1‑93 (MQ=255)
                                                                aGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtc                         >  1:4476298/1‑93 (MQ=255)
                                                                aGCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtc                         >  1:2642951/1‑93 (MQ=255)
                                                                 gCGATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtca                        <  1:1785070/93‑1 (MQ=255)
                                                                   gATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatc                      >  2:2364545/1‑93 (MQ=255)
                                                                   gATATATTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatc                      >  1:1480901/1‑93 (MQ=255)
                                                                    atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCTCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca                     >  2:1964704/1‑93 (MQ=255)
                                                                    atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca                     >  1:2029351/1‑93 (MQ=255)
                                                                    atatatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTtcatca                     >  1:3327377/1‑93 (MQ=255)
                                                                       tatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCCCCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacga                  <  1:1203103/93‑1 (MQ=255)
                                                                       tatTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacga                  >  2:4349347/1‑93 (MQ=255)
                                                                        atTGCGGTTGAACATTGAGCTGAAACTCGACACCTTCCTCGGGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCacgac                 >  2:501753/1‑93 (MQ=255)
                                                                             ggTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAc            >  1:4660836/1‑93 (MQ=255)
                                                                             ggTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAc            <  1:905506/93‑1 (MQ=255)
                                                                              gTTGAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATAcg           >  2:2266014/1‑93 (MQ=255)
                                                                                 gAACATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACgcgc        >  2:1794957/1‑93 (MQ=255)
                                                                                  aaCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCa       <  1:3227736/93‑1 (MQ=255)
                                                                                  aaCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCa       <  2:4261078/93‑1 (MQ=255)
                                                                                  aaCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCa       <  2:3714514/93‑1 (MQ=255)
                                                                                   aCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAg      >  2:1153662/1‑93 (MQ=255)
                                                                                   aCATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAg      >  2:649031/1‑93 (MQ=255)
                                                                                    cATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAgg     >  1:2384644/1‑93 (MQ=255)
                                                                                    cATTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAgg     >  2:3980340/1‑93 (MQ=255)
                                                                                     aTTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGt    >  1:3527135/1‑93 (MQ=255)
                                                                                     aTTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGt    <  1:3320720/93‑1 (MQ=255)
                                                                                     aTTGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGt    >  2:3424438/1‑93 (MQ=255)
                                                                                      ttGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTc   >  2:3516727/1‑93 (MQ=255)
                                                                                       tGAGCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCa  >  2:76770/1‑93 (MQ=255)
                                                                                          |                                                                                         
GCCCCGGCTCACCCATGGCGGTACGAATCAGGCCCACCGCAGTTAAACGCCCATCTTCGTCACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCA  >  NC_000913/3027340‑3027519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: