BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,032,284	T→C	D304G (GAT→GGT)	lysS ←	lysine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,032,284	0	T	C	100.0%	577.0 / NA	180	D304G (GAT→GGT)	lysS	lysine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/94); total (86/94)

Only 100 of 191 total aligned reads displayed.

TTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGA  >  NC_000913/3032194‑3032371

ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc                                                                                       >  2:3669163/1‑93 (MQ=255)

ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc                                                                                       <  1:3374782/93‑1 (MQ=255)

ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc                                                                                       >  1:4277749/1‑93 (MQ=255)

ttGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATAccc                                                                                       >  2:4155685/1‑93 (MQ=255)

 tGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCt                                                                                      <  1:2317523/93‑1 (MQ=255)

  gATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCtg                                                                                     >  2:3789636/1‑93 (MQ=255)

  gATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCtg                                                                                     <  1:1051276/93‑1 (MQ=255)

      gCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGcc                                                                                 >  2:444217/1‑93 (MQ=255)

       cTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCa                                                                                <  2:4243144/93‑1 (MQ=255)

       cTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCa                                                                                >  2:1128451/1‑93 (MQ=255)

        ttCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCag                                                                               >  2:282429/1‑93 (MQ=255)

         tCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCaga                                                                              <  1:342280/93‑1 (MQ=255)

          cacgcacgGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCagag                                                                             <  1:981829/93‑1 (MQ=255)

           aCGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGt                                                                            >  2:1888277/1‑93 (MQ=255)

            cGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTTGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTa                                                                           >  2:3792164/1‑93 (MQ=255)

            cGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTa                                                                           >  1:2111085/1‑93 (MQ=255)

            cGCATGGTCAGTTTTACGAACGGTTTACCGAAGTGCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTGACCGAGAATACCCTGTGCCAGAGTa                                                                           <  2:4333275/93‑1 (MQ=255)

             gCATGGTCAGTTTTTCGAACGGTTTACAGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTAc                                                                          >  2:462819/1‑93 (MQ=255)

              cATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACg                                                                         >  2:902532/1‑93 (MQ=255)

              cATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACg                                                                         >  1:2158503/1‑93 (MQ=255)

                 ggTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGaa                                                                      <  1:4191911/93‑1 (MQ=255)

                  gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGCGAATACCCTGTGCCAGAGTACGGAAc                                                                     >  2:58074/1‑93 (MQ=255)

                  gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc                                                                     >  2:1871327/1‑93 (MQ=255)

                  gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc                                                                     >  2:2273757/1‑93 (MQ=255)

                  gTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAAc                                                                     <  2:3908914/93‑1 (MQ=255)

                   tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa                                                                    >  2:3338941/1‑93 (MQ=255)

                   tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa                                                                    <  2:1020124/93‑1 (MQ=255)

                   tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa                                                                    >  1:819790/1‑93 (MQ=255)

                   tCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACa                                                                    <  1:2914810/93‑1 (MQ=255)

                    cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg                                                                   <  1:2574406/93‑1 (MQ=255)

                    cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg                                                                   <  2:3834125/93‑1 (MQ=255)

                    cAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAg                                                                   >  2:1424843/1‑93 (MQ=255)

                      gTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCg                                                                 >  2:1141267/1‑93 (MQ=255)

                      gTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCg                                                                 >  2:1515008/1‑93 (MQ=255)

                         tttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGAtt                                                              >  2:4223351/1‑93 (MQ=255)

                          ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc                                                             <  1:854711/93‑1 (MQ=255)

                          ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc                                                             <  1:3685176/93‑1 (MQ=255)

                          ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc                                                             <  1:3524130/93‑1 (MQ=255)

                          ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc                                                             <  2:2582217/93‑1 (MQ=255)

                          ttCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTc                                                             <  1:2840600/93‑1 (MQ=255)

                           tCGGACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCg                                                            <  2:3939187/93‑1 (MQ=255)

                            cGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCgg                                                           >  1:2884007/1‑93 (MQ=255)

                             gAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGt                                                          <  2:1303216/93‑1 (MQ=255)

                             gAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGt                                                          >  1:3138144/1‑93 (MQ=255)

                               agggTTTGCCGAAGTCCAGCGTCACGCCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCa                                                        <  2:1979060/91‑1 (MQ=255)

                                 ggTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGc                                                      <  2:1710454/93‑1 (MQ=255)

                                 ggTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGc                                                      >  1:4070924/1‑93 (MQ=255)

                                  gTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCt                                                     <  1:3452551/93‑1 (MQ=255)

                                   tttACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTc                                                    >  1:4561894/1‑93 (MQ=255)

                                      aCCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAt                                                 <  1:4597539/93‑1 (MQ=255)

                                      aCCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGAt                                                 <  1:2186852/93‑1 (MQ=255)

                                        cGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCa                                               <  2:1745173/93‑1 (MQ=255)

                                        cGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCa                                               >  2:744541/1‑93 (MQ=255)

                                         gAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAg                                              <  2:4250741/93‑1 (MQ=255)

                                          aaGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGa                                             <  1:1960122/93‑1 (MQ=255)

                                          aaGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGa                                             >  1:2749725/1‑93 (MQ=255)

                                           aGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAt                                            >  2:4085415/1‑93 (MQ=255)

                                           aGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAt                                            <  2:6991/93‑1 (MQ=255)

                                           aGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGAt                                            >  2:3937799/1‑93 (MQ=255)

                                            gTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATc                                           >  2:2466155/1‑93 (MQ=255)

                                              ccAGCGTCACGTCGCCGTAGGACACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGGACAGCGATTAGGTCAGCTCGATCGGCTCtt                                         >  1:437870/1‑93 (MQ=255)

                                               cAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCttt                                        <  1:1672032/93‑1 (MQ=255)

                                                aGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTg                                       <  1:1331563/93‑1 (MQ=255)

                                                 gCGTCACGTCGCCGTATGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt                                      <  2:4050005/93‑1 (MQ=255)

                                                 gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCATATCTTTGt                                      <  2:4577654/93‑1 (MQ=255)

                                                 gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt                                      >  1:2563347/1‑93 (MQ=255)

                                                 gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt                                      <  1:4356430/93‑1 (MQ=255)

                                                 gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGt                                      >  1:1988509/1‑93 (MQ=255)

                                                 gCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGCCAGCTCGATCAGATCTTTga                                      >  1:325129/1‑92 (MQ=255)

                                                     cACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGATTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATc                                  <  2:3527962/93‑1 (MQ=255)

                                                      aCGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCt                                 <  2:2954732/93‑1 (MQ=255)

                                                       cGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTg                                <  2:1995836/93‑1 (MQ=255)

                                                         tCGCCGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCg                              >  2:1187709/1‑93 (MQ=255)

                                                            ccGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTaa                           <  1:102143/93‑1 (MQ=255)

                                                             cGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAg                          <  1:1119215/93‑1 (MQ=255)

                                                             cGTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAg                          <  2:2128102/93‑1 (MQ=255)

                                                              gTAGGTCACTTCCGTCTTACCGAGAATGCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGc                         <  2:2217003/93‑1 (MQ=255)

                                                              gTAGGTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGc                         >  2:753/1‑93 (MQ=255)

                                                                 ggTCACCTCCGTCTAACCGAGAATCCCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCAt                      <  1:1541168/93‑1 (MQ=255)

                                                                  gTCACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATg                     >  2:87735/1‑93 (MQ=255)

                                                                    cACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTa                   <  1:3128796/93‑1 (MQ=255)

                                                                    cACTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTa                   <  1:248933/93‑1 (MQ=255)

                                                                     aCTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGTTTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTag                  <  2:4187662/93‑1 (MQ=255)

                                                                     aCTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTag                  >  2:2691010/1‑93 (MQ=255)

                                                                      cTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTaga                 >  2:3103757/1‑93 (MQ=255)

                                                                      cTTCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTaga                 <  2:1445105/93‑1 (MQ=255)

                                                                       ttCCGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTagag                <  2:3457408/93‑1 (MQ=255)

                                                                        tCCGTCTTACCGAGAATACCCTGTGACAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGt               >  1:3842197/1‑93 (MQ=255)

                                                                         ccGTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGtt              >  1:1803848/1‑93 (MQ=255)

                                                                         cagTCTTACCGAGAATACCCTGTGACAGAGTACGGAACAGCGATTCGGTCAGATCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGtt              >  2:2503198/3‑93 (MQ=255)

                                                                           gTCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTcc            <  1:602283/93‑1 (MQ=255)

                                                                            tCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCca           >  2:2091336/1‑93 (MQ=255)

                                                                            tCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCca           >  2:2994663/1‑93 (MQ=255)

                                                                            tCTTACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCca           <  2:2363486/93‑1 (MQ=255)

                                                                               tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca        <  1:1641093/93‑1 (MQ=255)

                                                                               tACCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatca        >  1:1504347/1‑93 (MQ=255)

                                                                                aCCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatcat       >  2:2553557/1‑93 (MQ=255)

                                                                                aCCGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCcatcat       <  2:2165171/93‑1 (MQ=255)

                                                                                 ccGAGAATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATg      <  1:3625141/93‑1 (MQ=255)

                                                                                    agaATACCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTg   >  2:3052872/1‑93 (MQ=255)

TTGATCGCTTCACGCATGGTCAGTTTTTCGAACGGTTTACCGAAGTCCAGCGTCACGTCGCCGTAGGTCACTTCCGTCTTACCGAGAATATCCTGTGCCAGAGTACGGAACAGCGATTCGGTCAGCTCGATCAGATCTTTGTAATCTGCGTAAGCCATGTAGAGTTCCATCATGGTGA  >  NC_000913/3032194‑3032371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`