| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,083,359 | T→C | H191R (CAC→CGC) | speA ← | biosynthetic arginine decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,083,359 | 0 | T | C | 99.5% | 588.9 / ‑4.5 | 186 | H191R (CAC→CGC) | speA | biosynthetic arginine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (97/88); minor base A (1/0); total (98/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01 | |||||||||||
Only 100 of 187 total aligned reads displayed.
CGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCA > NC_000913/3083270‑3083448 | cccAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGcccc < 1:1474627/93‑1 (MQ=255) ccAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCa > 2:4037789/1‑93 (MQ=255) ccAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCa > 1:3982249/1‑93 (MQ=255) cAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAt > 1:312313/1‑93 (MQ=255) aGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtc < 1:2820087/93‑1 (MQ=255) cGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtcttc > 2:3794971/1‑93 (MQ=255) gAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtcttct > 2:1996740/1‑93 (MQ=255) gAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCAtcttct < 1:4264614/93‑1 (MQ=255) ggAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCg > 2:2442415/1‑93 (MQ=255) gAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGc < 1:500207/93‑1 (MQ=255) aCGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCCATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCa > 1:1021994/1‑93 (MQ=255) aCGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCa > 1:3566633/1‑93 (MQ=255) cGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCaa > 1:1010261/1‑93 (MQ=255) gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAt > 1:4553051/1‑93 (MQ=255) gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAt < 1:980984/93‑1 (MQ=255) gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAt < 2:1084762/93‑1 (MQ=255) gACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGAGCCCCATCTTCTCGCCAAt > 1:3343275/1‑93 (MQ=255) cATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTa > 1:3738210/1‑93 (MQ=255) cATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTa < 2:4127546/93‑1 (MQ=255) aTTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTaa < 1:2053276/93‑1 (MQ=255) aTTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTaa > 2:133636/1‑93 (MQ=255) ttCAGACGTTCTGCTTCATCAAGCACAATGGCTATTTCTGACATCTCCTCAATGACAAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAAt < 2:2500624/93‑1 (MQ=255) cAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGc < 2:2356456/93‑1 (MQ=255) aGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGcc > 1:158897/1‑93 (MQ=255) gACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCa > 1:2295327/1‑93 (MQ=255) gACGTGCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCa < 1:1909623/93‑1 (MQ=255) cTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGa < 1:1665306/93‑1 (MQ=255) tGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGat > 2:588169/1‑93 (MQ=255) tGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGat > 2:3553421/1‑93 (MQ=255) gCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGata < 1:1179901/93‑1 (MQ=255) gCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGata < 1:133570/93‑1 (MQ=255) gCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGata > 1:2379701/1‑93 (MQ=255) cTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatat > 1:2498225/1‑93 (MQ=255) cTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatat < 2:4457812/93‑1 (MQ=255) ttCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatata < 2:1635281/93‑1 (MQ=255) tCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatatat < 2:3421186/93‑1 (MQ=255) tCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGatatat < 1:2013226/93‑1 (MQ=255) cATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATAtt < 2:2944009/93‑1 (MQ=255) cATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATAtt < 2:3017289/93‑1 (MQ=255) cATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATAtt < 2:875952/93‑1 (MQ=255) aTCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTc > 2:2664839/1‑93 (MQ=255) tCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTcg > 1:2982572/1‑93 (MQ=255) cAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCACTTAATGCCAGGCGGATATATTcgcg > 2:1739795/1‑93 (MQ=255) cAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTcgcg > 2:3941743/1‑93 (MQ=255) gCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGt > 1:4374973/1‑93 (MQ=255) acaATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCt > 1:4071479/1‑93 (MQ=255) acaATAGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCt > 2:450751/1‑93 (MQ=255) caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCtt < 1:2696638/93‑1 (MQ=255) caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCtt < 2:3731943/93‑1 (MQ=255) caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCtt < 2:3144289/93‑1 (MQ=255) caATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAAATAATGCCAGGCGGATATATTCGCGGTCtt < 2:3466358/93‑1 (MQ=255) aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta < 1:1767651/93‑1 (MQ=255) aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta < 2:3055475/93‑1 (MQ=255) aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta > 2:1849393/1‑93 (MQ=255) aTGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTAGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTta > 2:3824567/1‑93 (MQ=255) tGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTtat > 2:2587187/1‑93 (MQ=255) tGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTtat > 1:2508974/1‑93 (MQ=255) tGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTtat < 1:363493/93‑1 (MQ=255) gCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATaa < 2:429601/93‑1 (MQ=255) cGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAAc < 2:1482507/93‑1 (MQ=255) aTTTCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCg > 2:1919123/1‑93 (MQ=255) tttCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGt > 1:3074227/1‑93 (MQ=255) tttCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGt > 1:4450423/1‑93 (MQ=255) ttCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGtt < 2:1879519/93‑1 (MQ=255) tCTGACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTg > 2:1447382/1‑93 (MQ=255) gACATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAg > 2:4353497/1‑93 (MQ=255) cATCTTCTCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGAc < 1:3543849/93‑1 (MQ=255) tcttctCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGa < 1:1918534/93‑1 (MQ=255) tttctCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGAt < 1:2627375/92‑1 (MQ=255) cttctCAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGAt < 1:2675940/93‑1 (MQ=255) ctcAATGACCAGATAGACCTTGCGCCCCATCGTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGAc < 1:3003311/93‑1 (MQ=255) tcAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGTTGACg > 2:224601/1‑93 (MQ=255) tcAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACg > 2:4386746/1‑93 (MQ=255) cAATGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGc < 1:1096808/93‑1 (MQ=255) aaTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCt > 2:387194/1‑93 (MQ=255) aaTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCt > 1:1997435/1‑93 (MQ=255) aaTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCt > 1:4495450/1‑93 (MQ=255) aTGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTa < 1:3744802/93‑1 (MQ=255) tGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATTTATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTAc < 1:2926749/93‑1 (MQ=255) tGACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTAc < 2:2729480/93‑1 (MQ=255) gACCAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACg < 1:712988/93‑1 (MQ=255) ccAGATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACggg < 1:3211666/93‑1 (MQ=255) gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa < 1:1737498/93‑1 (MQ=255) gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa > 2:2965777/1‑93 (MQ=255) gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa > 2:1721276/1‑93 (MQ=255) gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa > 1:842612/1‑93 (MQ=255) gATAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCa < 1:3923248/93‑1 (MQ=255) aTAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAt > 1:160097/1‑93 (MQ=255) aTAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCAt < 1:4648027/93‑1 (MQ=255) aTAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTCTATAACCGTTGCAGACGATGACGCTACGGGTCAt > 1:828763/1‑93 (MQ=255) tAGACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATg > 1:2065326/1‑93 (MQ=255) gACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGcc < 2:2810843/93‑1 (MQ=255) gACCTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGcc > 1:1828868/1‑93 (MQ=255) ccTTGCGCCCCATCTTCTCACCAATTAATGCCATGCGGATATATTCGCGGTCTTTATAACCGTTGCACACGCTGACGCTACGGGTCATGCCac > 2:4568827/1‑92 (MQ=255) cTTGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGc > 1:1415419/1‑93 (MQ=255) ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa < 1:2841021/93‑1 (MQ=255) ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa > 2:2043465/1‑93 (MQ=255) ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa < 1:655549/93‑1 (MQ=255) ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa > 2:754342/1‑93 (MQ=255) ttGCGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCa > 1:433630/1‑93 (MQ=255) | CGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAATTAATGCCAGGCGGATATATTCGCGGTCTTTATAACCGTTGCAGACGATGACGCTACGGGTCATGCCAGCA > NC_000913/3083270‑3083448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |