BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,089,241	G→A	R30H (CGC→CAC)	b2946 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,089,241	0	G	A	100.0%	746.9 / NA	207	R30H (CGC→CAC)	b2946	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (93/114); total (93/114)

Only 100 of 214 total aligned reads displayed.

CTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAGCAAA  >  NC_000913/3089151‑3089329

cTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGcacg                                                                                        >  1:981971/1‑93 (MQ=255)

cTATGCGTATCCCCCGCATTTATCATCCTCAACCACTGACAAGCCATTCTCACATCGCGCTTTGTGATGATGCTGCCACACATATCGGGcacg                                                                                        >  2:1569416/1‑93 (MQ=255)

  aTGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTa                                                                                      <  2:1533185/93‑1 (MQ=255)

   tGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTAc                                                                                     <  2:3481905/93‑1 (MQ=255)

    gCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACt                                                                                    <  1:1886832/93‑1 (MQ=255)

      gTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTgc                                                                                  <  2:245516/93‑1 (MQ=255)

       tATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTgcg                                                                                 >  1:3356107/1‑93 (MQ=255)

       tATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTgcg                                                                                 >  2:2223979/1‑93 (MQ=255)

         tCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCa                                                                               >  1:1431968/1‑93 (MQ=255)

         tCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCa                                                                               >  2:1435924/1‑93 (MQ=255)

         tCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCa                                                                               >  2:1188691/1‑93 (MQ=255)

           ccccGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATg                                                                             >  1:3682458/1‑93 (MQ=255)

             ccGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGGGCATggg                                                                           <  1:1378627/93‑1 (MQ=255)

               gCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGc                                                                         >  1:1644414/1‑93 (MQ=255)

                 aTTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCg                                                                       >  1:2053951/1‑93 (MQ=255)

                 aTTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGAACGTACTGCGCATGGGGCCg                                                                       >  2:3593819/1‑93 (MQ=255)

                  tttATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCgg                                                                      <  1:2213125/93‑1 (MQ=255)

                   ttATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCggg                                                                     <  1:616656/93‑1 (MQ=255)

                   ttATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCggg                                                                     <  1:2497267/93‑1 (MQ=255)

                     atcatcCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGc                                                                   <  1:4548429/93‑1 (MQ=255)

                      tcatcCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCa                                                                  <  1:1139735/93‑1 (MQ=255)

                       catcatGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAg                                                                 <  2:4509399/93‑1 (MQ=255)

                       catcCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAg                                                                 <  1:3959493/93‑1 (MQ=255)

                       catcCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAg                                                                 <  1:124056/93‑1 (MQ=255)

                        atcCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAgg                                                                <  2:230860/93‑1 (MQ=255)

                           cTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGt                                                             <  2:2618912/93‑1 (MQ=255)

                           cTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGt                                                             <  1:3722956/93‑1 (MQ=255)

                           cTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGt                                                             >  1:2959475/1‑93 (MQ=255)

                            tGACCCACTGCCCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGtt                                                            <  1:59056/93‑1 (MQ=255)

                             gAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTg                                                           >  1:4413965/1‑93 (MQ=255)

                             gAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTg                                                           >  1:1606764/1‑93 (MQ=255)

                               aCCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCa                                                         >  2:2049938/1‑93 (MQ=255)

                               aCCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCa                                                         >  1:873561/1‑93 (MQ=255)

                                ccACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCaa                                                        <  1:4338586/93‑1 (MQ=255)

                                ccACTCACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCaa                                                        <  1:219509/93‑1 (MQ=255)

                                 cACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAt                                                       <  1:3191583/93‑1 (MQ=255)

                                 cACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAt                                                       >  1:3459377/1‑93 (MQ=255)

                                 cACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAt                                                       <  2:1919116/93‑1 (MQ=255)

                                 cACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAt                                                       >  2:219635/1‑93 (MQ=255)

                                 cACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAt                                                       >  2:3305481/1‑93 (MQ=255)

                                 cACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGATGCAAt                                                       >  2:1859562/1‑93 (MQ=255)

                                  ccTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAtt                                                      <  2:2847006/92‑1 (MQ=255)

                                  aCTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAtt                                                      >  2:3997436/1‑93 (MQ=255)

                                  aCTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAAtt                                                      >  2:79659/1‑93 (MQ=255)

                                    tGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGt                                                    >  2:4064620/1‑93 (MQ=255)

                                     gACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGtt                                                   <  1:2369563/93‑1 (MQ=255)

                                      aCCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGttt                                                  >  1:805064/1‑93 (MQ=255)

                                       ccAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTg                                                 >  2:1935130/1‑93 (MQ=255)

                                         aGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTgcg                                               >  1:4033342/1‑91 (MQ=255)

                                         aGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGAc                                               <  1:1102776/93‑1 (MQ=255)

                                         aGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGAc                                               >  1:1627562/1‑93 (MQ=255)

                                         aGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGAc                                               <  2:3239604/93‑1 (MQ=255)

                                          gCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCACATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACg                                              >  2:1321470/1‑93 (MQ=255)

                                            cATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGt                                            >  1:287454/1‑93 (MQ=255)

                                             aTTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTa                                           >  2:3277523/1‑93 (MQ=255)

                                             aTTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTa                                           <  2:176513/93‑1 (MQ=255)

                                              ttCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAg                                          >  2:4612688/1‑93 (MQ=255)

                                               tctcACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGc                                         <  2:1395215/93‑1 (MQ=255)

                                               tctcACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGc                                         <  2:4149661/93‑1 (MQ=255)

                                               tctcACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGc                                         >  2:3772338/1‑93 (MQ=255)

                                                  cacaTCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAAc                                      <  2:2641502/93‑1 (MQ=255)

                                                   acaTCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAAcc                                     >  1:2409185/1‑93 (MQ=255)

                                                    caTCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCa                                    >  1:3068177/1‑93 (MQ=255)

                                                    caTCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCa                                    >  1:3862533/1‑93 (MQ=255)

                                                    caTCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCa                                    <  1:3096566/93‑1 (MQ=255)

                                                    caTCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCa                                    >  2:4468506/1‑93 (MQ=255)

                                                    caTCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCa                                    <  2:552637/93‑1 (MQ=255)

                                                      tCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAgg                                  <  2:2500560/93‑1 (MQ=255)

                                                      tCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAgg                                  >  1:4589507/1‑93 (MQ=255)

                                                        gcgcTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTc                                <  2:1230911/93‑1 (MQ=255)

                                                        gcgcTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTc                                <  1:82530/93‑1 (MQ=255)

                                                        gcgcTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTc                                <  2:1008040/93‑1 (MQ=255)

                                                        gcgcTTTGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGCAGCAACCAggct                                >  2:1289896/1‑91 (MQ=255)

                                                           cTTTGCGAAGATGCCGCCAACCATATCGGGCATGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCttt                             <  2:3791870/93‑1 (MQ=255)

                                                             ttGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGa                           <  2:1143801/93‑1 (MQ=255)

                                                             ttGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGa                           >  1:1732626/1‑93 (MQ=255)

                                                              tGCGAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGAc                          <  2:2769263/93‑1 (MQ=255)

                                                                 gAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGcc                       >  2:2033680/1‑93 (MQ=255)

                                                                 gAAGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACAAGGTCTTTGACGcc                       >  1:4217402/1‑93 (MQ=255)

                                                                  aaGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCg                      >  2:355759/1‑93 (MQ=255)

                                                                   aGATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGa                     >  2:3353206/1‑93 (MQ=255)

                                                                    gATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGaa                    >  2:3003095/1‑93 (MQ=255)

                                                                    gATGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGaa                    >  1:133932/1‑93 (MQ=255)

                                                                      tGCCGCCAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAAt                  <  1:1474988/93‑1 (MQ=255)

                                                                       gccgccAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAAtt                 <  2:2357432/93‑1 (MQ=255)

                                                                        ccgccAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTa                <  2:3811226/93‑1 (MQ=255)

                                                                         cgccAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTAc               <  2:2534697/93‑1 (MQ=255)

                                                                            cAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAg            <  1:2783798/93‑1 (MQ=255)

                                                                            cAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAg            <  1:1431006/93‑1 (MQ=255)

                                                                            cAACCATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAg            <  1:3432274/93‑1 (MQ=255)

                                                                               ccATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAgcgc         >  2:2614891/1‑93 (MQ=255)

                                                                                cATATCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGcc        >  1:2734367/1‑93 (MQ=255)

                                                                                 atatCGGGCACGTACTGCGCATGGGGCCGGGGCAGGTGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCa       <  2:3184290/93‑1 (MQ=255)

                                                                                 atatCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCa       <  2:2006357/93‑1 (MQ=255)

                                                                                  tatCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAg      >  1:1670247/1‑93 (MQ=255)

                                                                                  tatCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAg      <  1:2588649/93‑1 (MQ=255)

                                                                                  tatCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAg      >  2:3933725/1‑93 (MQ=255)

                                                                                  tatCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAg      >  1:165428/1‑93 (MQ=255)

                                                                                  tatCGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAg      >  1:3839358/1‑93 (MQ=255)

                                                                                     cGGGCACGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAGCaa   <  2:1452834/93‑1 (MQ=255)

CTATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAGCAAA  >  NC_000913/3089151‑3089329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`