BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,091,676	A→G	Q53R (CAG→CGG)	yqgF →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,091,676	0	A	G	100.0%	494.0 / NA	156	Q53R (CAG→CGG)	yqgF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (59/97); total (59/97)

Only 100 of 169 total aligned reads displayed.

CCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTA  >  NC_000913/3091589‑3091765

ccGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑Cgg                                                                                       <  2:294316/93‑1 (MQ=255)

 cGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGa                                                                                      <  1:2732450/93‑1 (MQ=255)

 cGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGa                                                                                      <  1:2213304/93‑1 (MQ=255)

    cACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGa                                                                                   <  2:1583959/93‑1 (MQ=255)

       cGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAat                                                                                <  1:3004714/93‑1 (MQ=255)

        gCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CGGACGAAatc                                                                               >  1:2066404/1‑93 (MQ=255)

        gCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAatc                                                                               >  2:4309706/1‑93 (MQ=255)

         cTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAatca                                                                              <  1:4363038/93‑1 (MQ=255)

          tCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CGGGCGaaaaaat                                                                             >  2:2747067/1‑89 (MQ=255)

           cGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAatcatc                                                                            <  2:4115501/93‑1 (MQ=255)

           cGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAatcatc                                                                            <  1:1661226/93‑1 (MQ=255)

            gCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CCGGCGAAaacatac                                                                           >  2:979725/1‑91 (MQ=255)

             cccTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCAtcgt                                                                          <  1:154423/93‑1 (MQ=255)

              ccTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CGGGCGAAAACAtcgtc                                                                         >  2:4444201/1‑93 (MQ=255)

               cTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGCGCGGGGGAAA‑CAtcgtcg                                                                        >  2:2643953/1‑93 (MQ=255)

               cTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCAtcgtcg                                                                        >  1:477540/1‑93 (MQ=255)

                tttGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCgg                                                                       <  2:3032079/93‑1 (MQ=255)

                 ttGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAAACATCGTCGGt                                                                      >  1:4367397/1‑93 (MQ=255)

                  tGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGtt                                                                     <  2:2571930/93‑1 (MQ=255)

                     cTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CGGGCGAAATTATCGTCGGGTTgt                                                                  >  2:46072/1‑92 (MQ=255)

                     cTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGc                                                                  <  1:3814212/93‑1 (MQ=255)

                     cTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAAACATCGTCGGGTTGc                                                                  >  1:1937370/1‑93 (MQ=255)

                     cTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CCGGCGAAATCATCGTCGGGTTGc                                                                  >  1:1046809/1‑93 (MQ=255)

                      tGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAAACATCGTCGGGTTGcc                                                                 >  1:916071/1‑93 (MQ=255)

                      tGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGcc                                                                 <  2:935056/93‑1 (MQ=255)

                       gCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CGGGCGAAATCATCGTCGGGTTGCCg                                                                >  1:680709/1‑93 (MQ=255)

                        cAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGc                                                               <  1:1802472/93‑1 (MQ=255)

                          aTTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGCAATTATCGTCGGTTTTGCGCTg                                                             >  2:4095319/1‑93 (MQ=255)

                          aTTAAAGCACAGGACGGCACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGGCATTATTGTCGGTTTGgcgccg                                                             >  1:738147/1‑91 (MQ=255)

                            tAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CGGGCGGAATCATCGTCGGTTTGCCGCTgca                                                           >  2:2628531/1‑91 (MQ=255)

                            tAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGaa                                                           <  1:126144/93‑1 (MQ=255)

                              aaGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAata                                                         <  1:1118193/93‑1 (MQ=255)

                              aaGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAata                                                         <  2:3146704/93‑1 (MQ=255)

                              aaGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAata                                                         <  1:2699069/93‑1 (MQ=255)

                               aGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAatat                                                        <  2:3520396/93‑1 (MQ=255)

                                gCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGGCGCCGGATATg                                                       >  1:1796106/1‑93 (MQ=255)

                                gCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATg                                                       <  2:2162276/93‑1 (MQ=255)

                                gCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGGCGGTTTGCCGCTGAATATg                                                       >  2:2187774/1‑93 (MQ=255)

                                  acaGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGa                                                     <  1:1458140/93‑1 (MQ=255)

                                   caGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑c                                                   <  1:4595661/93‑1 (MQ=255)

                                    aGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑Cg                                                  <  2:3951199/93‑1 (MQ=255)

                                    aGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑Cg                                                  <  2:1659042/93‑1 (MQ=255)

                                      gACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGc                                                <  2:1962006/93‑1 (MQ=255)

                                      gACGGTACGCAGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGc                                                <  1:4240283/93‑1 (MQ=255)

                                       aCGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCa                                               <  1:505164/93‑1 (MQ=255)

                                        cGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCAc                                              <  2:3546273/93‑1 (MQ=255)

                                         ggTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCAcc                                             >  2:2158060/1‑93 (MQ=255)

                                          gTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAATCATCGTCGGTTTGCCGCTGGATATTGA‑CGGCAccc                                            >  1:3192485/1‑92 (MQ=255)

                                            aCGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAg                                          <  2:1746308/93‑1 (MQ=255)

                                             cGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAATCATCGTCGGGTTGCCGCCGGATATGGA‑GCGCAcccggg                                         >  1:3419827/1‑89 (MQ=255)

                                             cGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGc                                         <  2:2086567/93‑1 (MQ=255)

                                              gCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAAACATCGTCGGGTTGCCGCTGAATATGGG‑AGGGACCGAGCa                                        >  2:403213/1‑93 (MQ=255)

                                               ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCaa                                       <  2:4359228/93‑1 (MQ=255)

                                               ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCaa                                       <  1:888963/93‑1 (MQ=255)

                                                cGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAAc                                      <  2:128127/93‑1 (MQ=255)

                                                cGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAAc                                      <  1:1163126/93‑1 (MQ=255)

                                                 ggACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGGACCGAGCAAcc                                     >  2:1234773/1‑93 (MQ=255)

                                                  gACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCa                                    <  2:2292403/93‑1 (MQ=255)

                                                   aCTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCAt                                   <  2:146859/93‑1 (MQ=255)

                                                    cTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCAtt                                  <  2:1628238/93‑1 (MQ=255)

                                                    cTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCAtt                                  <  2:1568803/93‑1 (MQ=255)

                                                     tagAACATTATCGAGCGTTTACTGAAAGAGTGGCGGG‑CCGGCCAAATCAACGTTGGCATGCCCCCGGAAATAGACCGGCACC‑ACCAACCAttt                                 >  2:40116/3‑92 (MQ=255)

                                                     tGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCAttt                                 >  1:3602631/1‑92 (MQ=255)

                                                     tGGAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCAtta                                 >  1:1750729/1‑92 (MQ=255)

                                                      ggAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGa                                <  1:1647177/93‑1 (MQ=255)

                                                       gAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGAc                               <  2:1750092/93‑1 (MQ=255)

                                                       gAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGAc                               <  2:2241795/93‑1 (MQ=255)

                                                       gAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGAc                               <  1:4105137/93‑1 (MQ=255)

                                                       gAACATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGAc                               <  2:3115714/93‑1 (MQ=255)

                                                        aaCATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCACCGAGGAAACATTGACt                              >  2:1801285/1‑93 (MQ=255)

                                                        aaCATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACt                              <  1:2178856/93‑1 (MQ=255)

                                                        aaCATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAAACATCGTCGGGTTGGCGCTGAATATGGA‑CGGCACCGGGGAAACAtttaat                              >  1:429915/1‑89 (MQ=255)

                                                          cATTATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCACCGAGGAACCATTTACTGc                            >  1:4041818/1‑93 (MQ=255)

                                                            ttATCGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAAACATCGTCGGTTTGCCGCTGGATATGGA‑CGGCACCCAGGAACCATTGACTTccc                          >  2:4150061/1‑92 (MQ=255)

                                                              aTCGAGCGTGTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCaga                        <  1:4245100/93‑1 (MQ=255)

                                                                cGAGCGTTTACTGAAAGAGTGGCGGC‑CGGGCGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAgc                      >  2:4645185/1‑93 (MQ=255)

                                                                cGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAgc                      <  1:2820284/93‑1 (MQ=255)

                                                                cGAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAgc                      <  1:2567327/93‑1 (MQ=255)

                                                                 gAGCGTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCACCGAGCAAACATTTACTTCCAGGgcg                     >  2:3495619/1‑93 (MQ=255)

                                                                     gTTTACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTa                 <  1:3432662/93‑1 (MQ=255)

                                                                       ttACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTaaa               <  2:1187170/93‑1 (MQ=255)

                                                                       ttACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTaaa               <  1:3808007/93‑1 (MQ=255)

                                                                       ttACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTaaa               <  2:1677257/93‑1 (MQ=255)

                                                                        tACTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAt              <  1:2967854/93‑1 (MQ=255)

                                                                        tACTGAAAGAGTGGCGGC‑CGGACGAAAAAATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTTCCAGAGCGCGTAAAt              >  2:1021003/1‑93 (MQ=255)

                                                                         aCTGAAAGAGTGGCGTT‑AGGACGAAATCATCGTGGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAtt             <  2:754603/93‑1 (MQ=255)

                                                                         aCTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGGATATGGA‑CGGGACCGAGCAACCATTGACTGCCAGAGCGCGTAAAtt             >  2:324118/1‑93 (MQ=255)

                                                                         aCTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAtt             <  1:1468828/93‑1 (MQ=255)

                                                                          cTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAttt            <  2:3775619/93‑1 (MQ=255)

                                                                          cTGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGGTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAAttt            >  1:1298571/1‑93 (MQ=255)

                                                                          cTGAAAGAGTGGCGAC‑CGCACGAAATCATCGTCGGTTGGCCGCTGAATATGGA‑GGGCACCGAGCAACCATTGACTGGCAGAGCGCGTTAAtta            <  2:1429537/93‑2 (MQ=255)

                                                                           tGAAAGAGTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAAACATTTACTTCCAGAGCGCGGAAAtttt           >  1:3754671/1‑92 (MQ=255)

                                                                              aaGAGGGGCGGC‑GGGACGAAATCATCGTCGTTTTGCCGCTGAATAGGGA‑GGGCCCCGAGCAACCATTGACTGCAAGAGCGGGTAAATTTGCCa        <  2:3282786/93‑1 (MQ=255)

                                                                                gagTGGCGGC‑CGGGCGAAATCATCGTCGGGTTGCCGCCCAAAATGGA‑AGGCACCCCGGAACCATTGACTGGCAGAGCGCGTAAATTTGGCAAc      >  2:4188625/1‑93 (MQ=255)

                                                                                gagTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAAc      <  1:3914694/93‑1 (MQ=255)

                                                                                gagTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAAc      <  1:3936940/93‑1 (MQ=255)

                                                                                gagTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAAc      <  2:764775/93‑1 (MQ=255)

                                                                                  gTGGCGGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCg    <  2:551530/93‑1 (MQ=255)

                                                                                    ggcggc‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTa  <  1:1042451/93‑1 (MQ=255)

                                                                                    ggcggc‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTa  <  2:1934817/93‑1 (MQ=255)

CCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGC‑CGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGA‑CGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTA  >  NC_000913/3091589‑3091765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`