Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,129,641 C→T V261V (GTG→GTA b2983 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,129,6410CT100.0% 534.0 / NA 149V261V (GTG→GTAb2983hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (85/64);  total (85/64)

Only 100 of 160 total aligned reads displayed.

AAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC  >  NC_000913/3129552‑3129730
                                                                                         |                                                                                         
aaaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTTAATAACCCTGCGGCAACGGGTCCTAACACGAACCCCACCAATACt                                                                                        >  2:2427235/1‑93 (MQ=255)
aaaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACt                                                                                        >  2:4597097/1‑93 (MQ=255)
aaaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACt                                                                                        <  1:2988237/93‑1 (MQ=255)
aaaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACt                                                                                        <  2:1527416/93‑1 (MQ=255)
 aaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtg                                                                                       >  1:1343920/1‑93 (MQ=255)
 aaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtg                                                                                       >  2:2651908/1‑93 (MQ=255)
 aaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCAGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtg                                                                                       <  1:740859/93‑1 (MQ=255)
  aCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtgt                                                                                      >  1:1507637/1‑93 (MQ=255)
  aCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtgt                                                                                      <  1:2569077/93‑1 (MQ=255)
  aCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGAACCCCACCAATACtgt                                                                                      <  1:2898417/93‑1 (MQ=255)
   cccGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtgtg                                                                                     >  1:633418/1‑93 (MQ=255)
      gCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctg                                                                                  <  1:1577034/93‑1 (MQ=255)
       cTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctgc                                                                                 >  1:4099072/1‑93 (MQ=255)
       cTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctgc                                                                                 >  1:1515809/1‑93 (MQ=255)
         ggCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAc                                                                               >  1:3285501/1‑93 (MQ=255)
            gTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAg                                                                            <  2:2190329/93‑1 (MQ=255)
            gTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAg                                                                            >  1:3920247/1‑93 (MQ=255)
             ttCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGt                                                                           >  1:2080525/1‑93 (MQ=255)
             ttCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGt                                                                           <  1:2719750/93‑1 (MQ=255)
              tCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGtt                                                                          >  2:4449244/1‑93 (MQ=255)
              tCCGGCGACGTCGAAGAATCTCATGGCGATTATAAATAACCAGGCGGCAGCGGGTCCTAACACGACCCCCACCAATACTGTGCTGCACGAGtt                                                                          <  1:4626232/93‑1 (MQ=255)
               ccGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTa                                                                         >  2:2858298/1‑93 (MQ=255)
                 ggcggcGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAcg                                                                       >  2:4127790/1‑93 (MQ=255)
                 ggcggcGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAcg                                                                       <  2:1058702/93‑1 (MQ=255)
                  gcggcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAcgc                                                                      >  2:495017/1‑93 (MQ=255)
                    ggcgTCGAAGAATGTCATGGCGATTTTAAATACCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACgcgc                                                                    <  1:3199096/93‑1 (MQ=255)
                     gcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGcc                                                                   >  1:2553629/1‑93 (MQ=255)
                     gcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAAGAGCTACGCGcc                                                                   >  2:2452644/1‑93 (MQ=255)
                       gTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCgc                                                                 >  2:1199672/1‑92 (MQ=255)
                        tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc                                                                >  1:3155937/1‑93 (MQ=255)
                        tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc                                                                >  2:1970646/1‑93 (MQ=255)
                         cGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAcc                                                               <  2:3915705/93‑1 (MQ=255)
                           aagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAg                                                             >  2:3534606/1‑93 (MQ=255)
                            agaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGa                                                            >  2:3991173/1‑93 (MQ=255)
                            agaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGa                                                            <  2:1941556/93‑1 (MQ=255)
                            agaaTGTCATGGCGATTTTAAATAACCCGGCGAAAGCGGGTCCTAACACGATCCCCACCAATACTGAGCTGCACCAGCTACGCGCCGAGCAGa                                                            >  2:96213/1‑93 (MQ=255)
                            agaaAGCCATGGCGATTTTAAATAACCCGGCGGGGGAGGGTCCTAACACGCTCCCCACCAATACTGTGCTGCATGAGGTACGCGCCGAACAgt                                                            >  2:2350795/1‑92 (MQ=255)
                             gaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAt                                                           >  2:4023321/1‑93 (MQ=255)
                              aaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATg                                                          >  1:3052137/1‑93 (MQ=255)
                               aTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATgg                                                         <  2:1758764/93‑1 (MQ=255)
                               aTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATgg                                                         >  1:173587/1‑93 (MQ=255)
                                  tCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGt                                                      >  1:4527225/1‑93 (MQ=255)
                                  tCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGt                                                      <  1:999151/93‑1 (MQ=255)
                                    aTGGCAATTTTAAATAACCCGGCGGCATCGGGGCCTAACACGATCCCCACAAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTgg                                                    <  2:4495174/93‑1 (MQ=255)
                                       gCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGACGACCAGGTGGAGTGGGCa                                                 >  2:3022914/1‑93 (MQ=255)
                                         gATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAAt                                               <  1:4018477/93‑1 (MQ=255)
                                          aTTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATg                                              >  1:3558039/1‑93 (MQ=255)
                                           ttttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgt                                             <  1:1837031/93‑1 (MQ=255)
                                           ttttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgt                                             >  2:660941/1‑93 (MQ=255)
                                           ttttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgt                                             >  2:4259210/1‑93 (MQ=255)
                                            tttAAATACCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGCGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgtt                                            <  1:2854573/93‑1 (MQ=255)
                                                aaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggtt                                        >  2:391744/1‑93 (MQ=255)
                                                aaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggtt                                        <  1:3634730/93‑1 (MQ=255)
                                                aaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggtt                                        <  1:1956898/93‑1 (MQ=255)
                                                 aTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggttg                                       >  1:193315/1‑93 (MQ=255)
                                                   aaCCCGGCGGCAGCGGGTCCTAACACGATCCCCTCCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAc                                     <  2:3362023/93‑1 (MQ=255)
                                                   aaCCCGGCGGCAGCGGGTCCTAACACGATCCCCACAAATACTTTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAc                                     >  2:3643399/1‑93 (MQ=255)
                                                    aCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAcc                                    >  1:511256/1‑93 (MQ=255)
                                                    aCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAcc                                    >  2:2566118/1‑93 (MQ=255)
                                                     cccGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCa                                   <  2:1421218/93‑1 (MQ=255)
                                                     cccGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCa                                   <  1:1770645/93‑1 (MQ=255)
                                                       cggcggCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGa                                 <  2:4641422/93‑1 (MQ=255)
                                                         gcggcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACa                               >  2:2526709/1‑93 (MQ=255)
                                                           ggcAGCGGGACCTAACACGACCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaa                             <  2:3245579/93‑1 (MQ=255)
                                                            gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            <  2:3737499/93‑1 (MQ=255)
                                                            gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            >  2:2934377/1‑93 (MQ=255)
                                                            gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            <  2:754139/93‑1 (MQ=255)
                                                            gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            <  1:1004140/93‑1 (MQ=255)
                                                              aGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACt                          <  1:3025980/93‑1 (MQ=255)
                                                              aGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAAGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACGAGACAAAAca                          >  1:2325696/1‑92 (MQ=255)
                                                               gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc                         >  1:1310930/1‑93 (MQ=255)
                                                               gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc                         >  2:3480974/1‑93 (MQ=255)
                                                                 gggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCa                       >  2:146238/1‑93 (MQ=255)
                                                                  ggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      >  2:3661935/1‑93 (MQ=255)
                                                                  ggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      <  1:2821136/93‑1 (MQ=255)
                                                                  ggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      >  1:619334/1‑93 (MQ=255)
                                                                  ggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      >  2:2097111/1‑93 (MQ=255)
                                                                  ggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      >  2:2097110/1‑93 (MQ=255)
                                                                        aaCACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCt                >  1:4092484/1‑93 (MQ=255)
                                                                          cacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCttt              <  1:2998467/93‑1 (MQ=255)
                                                                          cacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCttt              <  1:1964024/93‑1 (MQ=255)
                                                                             gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt           <  1:1492305/93‑1 (MQ=255)
                                                                              aTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATg          <  2:1708050/93‑1 (MQ=255)
                                                                               tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt         >  1:3728702/1‑93 (MQ=255)
                                                                               tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt         >  2:2784353/1‑93 (MQ=255)
                                                                               tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt         >  2:2710264/1‑93 (MQ=255)
                                                                                ccccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTa        <  1:2577731/93‑1 (MQ=255)
                                                                                ccccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTa        <  2:1124360/93‑1 (MQ=255)
                                                                                 cccACTAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt       <  1:383305/93‑1 (MQ=255)
                                                                                 cccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAGGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt       <  1:1215439/93‑1 (MQ=255)
                                                                                  ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      >  2:4153419/1‑93 (MQ=255)
                                                                                  ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      >  1:868460/1‑93 (MQ=255)
                                                                                  ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      <  1:2929523/93‑1 (MQ=255)
                                                                                  ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      <  2:166431/93‑1 (MQ=255)
                                                                                  ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      <  1:2379565/93‑1 (MQ=255)
                                                                                   caccaATACTGTGCTGCAAGAGCTCCGCCCAGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAAGCGCCTTTAATGTATCg     >  2:1280017/1‑93 (MQ=255)
                                                                                    cccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg    <  1:35355/92‑1 (MQ=255)
                                                                                    accaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTGGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg    <  2:3190187/93‑1 (MQ=255)
                                                                                     ccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCggg   >  1:3723711/1‑93 (MQ=255)
                                                                                      caATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGc  >  2:2338680/1‑93 (MQ=255)
                                                                                         |                                                                                         
AAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC  >  NC_000913/3129552‑3129730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: