BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,202,607	T→C	C91C (TGT→TGC)	ygiH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,202,607	0	T	C	99.5%	665.5 / ‑3.9	212	coding (273/618 nt)	ygiH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (102/109); minor base . (0/1); total (102/110)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.48e-01

Only 100 of 219 total aligned reads displayed.

CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGA  >  NC_000913/3202517‑3202696

cGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCgcctgcct                                                                                         <  1:3832872/93‑1 (MQ=255)

    gTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGa                                                                                     <  1:2770172/93‑1 (MQ=255)

     ttCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGac                                                                                    >  2:2871858/1‑93 (MQ=255)

     ttCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGac                                                                                    >  1:1736597/1‑93 (MQ=255)

        tGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGAcaca                                                                                 >  1:4272684/1‑93 (MQ=255)

        tGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGAcaca                                                                                 <  2:570755/93‑1 (MQ=255)

        tGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGAcaca                                                                                 >  1:1825168/1‑93 (MQ=255)

         gAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACAt                                                                                <  2:557300/93‑1 (MQ=255)

         gAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACAt                                                                                >  2:507768/1‑93 (MQ=255)

          aaaGGAATGTTGCCCGTTCGGGGGGCCTATGGATTAAGTGTCAACCCCCTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATc                                                                               <  1:1923890/93‑1 (MQ=255)

          aaaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATc                                                                               <  1:3683908/93‑1 (MQ=255)

          aaaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATc                                                                               <  2:2314743/93‑1 (MQ=255)

          aaaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATc                                                                               <  2:2351727/93‑1 (MQ=255)

          aaaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATc                                                                               >  2:865481/1‑93 (MQ=255)

             ggAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTgg                                                                            >  1:3230578/1‑93 (MQ=255)

             ggAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTgg                                                                            <  2:3107314/93‑1 (MQ=255)

             ggAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTgg                                                                            <  1:514314/93‑1 (MQ=255)

                aTGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACCTCTGGccc                                                                         >  2:3138207/1‑93 (MQ=255)

                aTGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGccc                                                                         >  2:1615138/1‑93 (MQ=255)

                aTGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGccc                                                                         >  2:2598322/1‑93 (MQ=255)

                  gTTGCCCGTCTGGGGCGCGCATGAATTAGGCGTCAGCCCCTTCTAGCTAGGCGTAATTCACATCGCCGCCTGCCTTGGACACATCTGGGCCGt                                                                       >  2:4276055/1‑93 (MQ=255)

                    tGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGttt                                                                     <  2:1389442/93‑1 (MQ=255)

                      cccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttc                                                                   <  1:2393300/93‑1 (MQ=255)

                      cccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttc                                                                   <  2:3029883/93‑1 (MQ=255)

                      cccGTCGGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttc                                                                   <  2:4469412/93‑1 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  2:2967413/1‑93 (MQ=255)

                       ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttct                                                                  >  1:3134933/1‑93 (MQ=255)

                        cGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttctt                                                                 >  1:4521703/1‑93 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                >  1:810767/1‑93 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                <  1:3361679/93‑1 (MQ=255)

                         gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTttcttc                                                                <  1:3504685/93‑1 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               >  2:3336494/1‑93 (MQ=255)

                          tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCg                                                               <  1:1171985/93‑1 (MQ=255)

                             ggggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAt                                                            >  1:2950657/1‑93 (MQ=255)

                              gggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAtt                                                           <  2:43018/93‑1 (MQ=255)

                               ggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGAttt                                                          >  2:912396/1‑93 (MQ=255)

                                gcgcGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTa                                                         <  1:1592805/93‑1 (MQ=255)

                                   cgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAag                                                      <  1:2535375/93‑1 (MQ=255)

                                    gTATTAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  2:3878007/93‑1 (MQ=255)

                                    gTATGAATTAGTTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  2:2646906/93‑1 (MQ=255)

                                    gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAagg                                                     <  1:3568648/93‑1 (MQ=255)

                                           ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                              <  2:1512536/93‑1 (MQ=255)

                                            tAGGTGTCATCCCCTTCTGTCTAGGCTTAATTACCATCGCCTCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAg                                             <  1:1040628/93‑1 (MQ=255)

                                            tAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAg                                             <  1:1303229/93‑1 (MQ=255)

                                            tAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAg                                             <  2:1165538/93‑1 (MQ=255)

                                             aGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAgg                                            <  2:2077786/93‑1 (MQ=255)

                                             aGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAgg                                            <  2:766678/93‑1 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           >  2:1766056/1‑93 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           >  2:3244176/1‑93 (MQ=255)

                                              ggTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGc                                           >  1:1710875/1‑93 (MQ=255)

                                                tgtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGTCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGt                                         <  2:2539864/93‑1 (MQ=255)

                                                 gtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGtt                                        <  2:3986844/93‑1 (MQ=255)

                                                  tCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTg                                       <  1:3459933/93‑1 (MQ=255)

                                                    aGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCt                                     <  1:3188993/93‑1 (MQ=255)

                                                    aGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCt                                     >  2:294865/1‑93 (MQ=255)

                                                    aGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCt                                     <  1:1001471/93‑1 (MQ=255)

                                                    aGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTG‑CCTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    <  2:21769/93‑1 (MQ=255)

                                                     gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    >  1:2091108/1‑93 (MQ=255)

                                                     gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    >  1:4066934/1‑93 (MQ=255)

                                                     gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                    >  1:4179412/1‑93 (MQ=255)

                                                      ccccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAc                                   <  2:3636809/93‑1 (MQ=255)

                                                      ccccTTCTGGCTAGGCTTAATTGCCATCGCCACCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAc                                   <  1:4684717/93‑1 (MQ=255)

                                                       cccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAcc                                  >  1:1672171/1‑93 (MQ=255)

                                                       cccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAcc                                  >  1:2380200/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  1:3248617/1‑93 (MQ=255)

                                                        ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCg                                 >  1:3922419/1‑93 (MQ=255)

                                                         cTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGc                                >  1:2736749/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCt                               >  1:1635194/1‑93 (MQ=255)

                                                          ttCTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCt                               >  2:4476081/1‑93 (MQ=255)

                                                            cTGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCttt                             <  1:2856056/93‑1 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            <  2:709482/93‑1 (MQ=255)

                                                             tGGCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCtttt                            >  2:3082914/1‑93 (MQ=255)

                                                              ggCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTg                           <  1:2158538/93‑1 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          <  2:1931431/93‑1 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          <  2:1726493/93‑1 (MQ=255)

                                                               gCTAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCAGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                          >  1:2268424/1‑93 (MQ=255)

                                                                 tAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTg                        <  1:2659728/93‑1 (MQ=255)

                                                                 tAGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTg                        >  2:1695999/1‑93 (MQ=255)

                                                                  aGGCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGc                       >  1:4140045/1‑93 (MQ=255)

                                                                   ggCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGcc                      >  2:1052461/1‑93 (MQ=255)

                                                                   ggCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGcc                      >  2:2464354/1‑93 (MQ=255)

                                                                    gCTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCa                     <  1:2408954/93‑1 (MQ=255)

                                                                     cTTAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGCAAAGGCGTTGCTACCGCTTTTGGTGCCAt                    >  2:605074/1‑93 (MQ=255)

                                                                      ttAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATc                   <  1:4184023/93‑1 (MQ=255)

                                                                      ttAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATc                   >  2:1233974/1‑93 (MQ=255)

                                                                      ttAATTGCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATc                   >  2:3571629/1‑93 (MQ=255)

                                                                            gCCATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCAccc             >  1:3036659/1‑93 (MQ=255)

                                                                             ccATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCa            >  2:4608277/1‑93 (MQ=255)

                                                                              cATCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt           >  1:2072051/1‑93 (MQ=255)

                                                                               aTCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAtt          <  2:3935857/93‑1 (MQ=255)

                                                                               aTCGCCGCCTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAtt          >  2:1002051/1‑93 (MQ=255)

                                                                                tCGCCGCCTGCCTTGGACACATCTGTCCCGTTTTCTTCGGATTTAAAGGAGGGAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTg         >  1:2283293/1‑93 (MQ=255)

                                                                                  gccgccTGCCTTGGACACATCTGGCCCTTTTTCTTCGGATTTAAAGGAGGAAAAGGCTTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc       <  2:945660/93‑1 (MQ=255)

                                                                                   ccgccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCt      <  1:830135/93‑1 (MQ=255)

                                                                                     gcctgcctTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTgg    <  1:4594339/93‑1 (MQ=255)

                                                                                     gcctgcctTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTgg    <  1:2613093/93‑1 (MQ=255)

                                                                                      ccTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTggg   >  1:876248/1‑93 (MQ=255)

                                                                                       cTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCCCCCATTGGCTGGGa  <  1:466177/93‑1 (MQ=255)

                                                                                       cTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGa  >  2:4149663/1‑93 (MQ=255)

                                                                                       cTGCCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGa  <  2:2796863/93‑1 (MQ=255)

CGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGA  >  NC_000913/3202517‑3202696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`