BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,262,568	T→C	T31A (ACG→GCG)	tdcC ←	TdcC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,262,568	0	T	C	99.5%	607.1 / ‑5.1	196	T31A (ACG→GCG)	tdcC	TdcC
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (102/93); total (102/94)
Fisher's exact test for biased strand distribution p-value = 4.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.57e-01

Only 100 of 204 total aligned reads displayed.

GTATGCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGTACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACTCA  >  NC_000913/3262479‑3262657

gTATGCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCAcc                                                                                        <  2:2161453/93‑1 (MQ=255)

gTATGCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCAcc                                                                                        <  1:699471/93‑1 (MQ=255)

  aTGCCAATACGAAGATCAGAATAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCTCCaa                                                                                      <  2:3004586/93‑1 (MQ=255)

  aTGCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCaa                                                                                      <  1:4210354/93‑1 (MQ=255)

   tGCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCaaa                                                                                     >  2:742988/1‑93 (MQ=255)

   tGCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCaaa                                                                                     >  2:4677559/1‑93 (MQ=255)

    gCCAATACCAACATCAGAAGAATCGGTATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAAc                                                                                    <  2:4608675/93‑1 (MQ=255)

    gCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAAc                                                                                    <  1:1011544/93‑1 (MQ=255)

     ccAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACa                                                                                   <  2:2289557/93‑1 (MQ=255)

      cAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACaa                                                                                  >  2:4140002/1‑93 (MQ=255)

       aaTACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAg                                                                                 >  2:1073678/1‑93 (MQ=255)

       aaTACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAg                                                                                 <  1:4440139/93‑1 (MQ=255)

         tACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGcc                                                                               <  2:52233/93‑1 (MQ=255)

          aCCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCt                                                                              >  2:2571205/1‑93 (MQ=255)

           ccAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTa                                                                             >  2:1884598/1‑93 (MQ=255)

            cAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTaa                                                                            <  2:18313/93‑1 (MQ=255)

            cAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTaa                                                                            <  2:3082564/93‑1 (MQ=255)

            cAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTaa                                                                            <  1:775403/93‑1 (MQ=255)

             aaCATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAAc                                                                           >  2:66360/1‑93 (MQ=255)

             aaCATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGAATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAAc                                                                           >  1:2221152/1‑93 (MQ=255)

              aCATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGCACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACg                                                                          <  1:2511735/93‑1 (MQ=255)

              aCATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACg                                                                          >  1:4585228/1‑93 (MQ=255)

                aTCAGAAGAATCGTGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTc                                                                        <  2:2924989/93‑1 (MQ=255)

                aTCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTc                                                                        >  2:2684574/1‑93 (MQ=255)

                 tCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTcc                                                                       >  1:535304/1‑93 (MQ=255)

                  cAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTTCCTCACCAAACAAGCCTAACGTCCa                                                                      <  1:3793282/93‑1 (MQ=255)

                  cAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCa                                                                      <  1:936677/93‑1 (MQ=255)

                  cAGAAGAATCGGGATCAGTCCGCCAAAACCGGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCa                                                                      <  2:3711571/93‑1 (MQ=255)

                    gaagaaTCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCAtg                                                                    >  1:2303839/1‑93 (MQ=255)

                       gaaTCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAATAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTgg                                                                 >  2:4491136/1‑93 (MQ=255)

                       gaaTCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTgg                                                                 >  1:4144658/1‑93 (MQ=255)

                        aaTCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGt                                                                <  1:1335556/93‑1 (MQ=255)

                          tCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTAt                                                              >  1:4420418/1‑93 (MQ=255)

                           cGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATc                                                             <  1:4533281/93‑1 (MQ=255)

                            gggATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCt                                                            >  2:3944655/1‑93 (MQ=255)

                             ggATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTg                                                           >  1:2662378/1‑93 (MQ=255)

                             ggATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTg                                                           >  1:2616274/1‑93 (MQ=255)

                              gATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGa                                                          <  2:3423504/93‑1 (MQ=255)

                               aTCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGAt                                                         >  1:301414/1‑93 (MQ=255)

                                tCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGAtt                                                        >  1:3971266/1‑93 (MQ=255)

                                 cAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGAttt                                                       <  2:2239481/93‑1 (MQ=255)

                                  aGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTa                                                      >  1:596875/1‑93 (MQ=255)

                                  aGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTa                                                      <  2:2027978/93‑1 (MQ=255)

                                   ttcagCCAAAACCTGTGCGCATATGGCAGAACAGCACCCCGGCGCCGATTGCCGCCCCAAACAAGCCTAACGTCCATGGGGTATCTGATTTAc                                                     <  2:3476375/89‑1 (MQ=255)

                                    tCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACg                                                    >  1:1486904/1‑93 (MQ=255)

                                       gCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCa                                                 >  2:4640118/1‑93 (MQ=255)

                                       gCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCa                                                 >  2:4519998/1‑93 (MQ=255)

                                       gCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCa                                                 >  2:2412580/1‑93 (MQ=255)

                                         cAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAgg                                               >  1:3586841/1‑93 (MQ=255)

                                         cAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAgg                                               >  1:3230010/1‑93 (MQ=255)

                                         cAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAgg                                               >  2:2808510/1‑93 (MQ=255)

                                         cAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAgg                                               >  1:3551835/1‑93 (MQ=255)

                                          aaaaCCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGa                                              >  2:1936453/1‑93 (MQ=255)

                                          aaaaCCTGCGCGGATAGGGAAGAACAGCAACCCGGCGCCGATTGCCGCACCAAACAAGACTAACGTCCATGTGGTATCTGATTTACGCCAGGa                                              >  2:3277237/1‑93 (MQ=255)

                                           aaaCCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGAc                                             <  2:3529379/93‑1 (MQ=255)

                                            aaCCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACg                                            <  2:1036491/93‑1 (MQ=255)

                                             aCCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTAGCTGATTTACGCCAGGACGa                                           <  2:904900/93‑1 (MQ=255)

                                              ccTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGAt                                          <  1:4666566/93‑1 (MQ=255)

                                               cTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGAtt                                         <  2:2936791/93‑1 (MQ=255)

                                               cTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGAtt                                         <  1:1132102/93‑1 (MQ=255)

                                               cTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGAtt                                         >  2:2140989/1‑93 (MQ=255)

                                                tGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTg                                        >  2:1633857/1‑93 (MQ=255)

                                                   gcgGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGttt                                     <  2:4053921/93‑1 (MQ=255)

                                                   gcgGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGttt                                     >  1:4624744/1‑93 (MQ=255)

                                                     ggATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTg                                   >  2:766075/1‑93 (MQ=255)

                                                      gATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGt                                  >  1:3094879/1‑93 (MQ=255)

                                                        tAGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTct                                >  1:3464457/1‑93 (MQ=255)

                                                        acgggAACAACATCACCCCGGCGCCGATTGCCGCACGAAACAAGCCTAACGTCCACGTGCTATCTGATCTACGCCAGGACGATTGTTTTGTct                                <  1:2085653/91‑1 (MQ=255)

                                                         aGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTctg                               <  2:515912/93‑1 (MQ=255)

                                                         aGGGAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTctg                               <  1:989518/93‑1 (MQ=255)

                                                          gggAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTctgg                              >  2:2601494/1‑93 (MQ=255)

                                                          gggAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTctgg                              <  2:3835452/93‑1 (MQ=255)

                                                          gggAAGAACAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTctgg                              <  1:3859180/93‑1 (MQ=255)

                                                             aagaaCAGCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTctggctg                           <  1:1914517/93‑1 (MQ=255)

                                                                    gCACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACaa                    >  1:1575085/1‑93 (MQ=255)

                                                                     cACCCCGGCGCCGATTGCCGTACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAAt                   <  1:4114804/93‑1 (MQ=255)

                                                                     cACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAAt                   <  2:1546024/93‑1 (MQ=255)

                                                                     cACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAAt                   >  2:2522451/1‑93 (MQ=255)

                                                                     cACCCCGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAAt                   <  2:4357905/93‑1 (MQ=255)

                                                                       ccccGGCGCCTATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGc                 >  2:3386737/1‑93 (MQ=255)

                                                                        cccGGCGCCGATTGCCGCACCAAACAAGCCTATCGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCt                <  1:1941049/93‑1 (MQ=255)

                                                                         ccGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGTCTGGATACAATGCTa               <  2:3181627/93‑1 (MQ=255)

                                                                         ccGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTa               >  2:136046/1‑93 (MQ=255)

                                                                         ccGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTa               <  2:4255382/93‑1 (MQ=255)

                                                                         ccGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTa               >  2:4035825/1‑93 (MQ=255)

                                                                          cGGCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTAt              <  1:1156054/93‑1 (MQ=255)

                                                                           ggCGCCGATTGCCGCACTAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATc             <  1:1248405/93‑1 (MQ=255)

                                                                           ggCGCCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATc             <  1:2359968/93‑1 (MQ=255)

                                                                              gcCGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATAAAATGCTATCTGa          >  2:2719579/1‑93 (MQ=255)

                                                                               ccGATTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGaa         <  2:2197795/93‑1 (MQ=255)

                                                                                  aTTGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTa      >  1:1197331/1‑93 (MQ=255)

                                                                                   ttGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTAc     <  1:3000383/93‑1 (MQ=255)

                                                                                   ttGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGCTTTGTCTGGCTGGATACAATGCTATCTGAAGTAc     >  2:2376545/1‑93 (MQ=255)

                                                                                    tGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACt    <  1:3641414/93‑1 (MQ=255)

                                                                                    tGCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACt    <  2:1062204/93‑1 (MQ=255)

                                                                                     gCCGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACTc   >  2:1012797/1‑93 (MQ=255)

                                                                                      ccGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACTCa  <  1:3382064/93‑1 (MQ=255)

                                                                                      ccGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACTCa  <  1:2131373/93‑1 (MQ=255)

                                                                                      ccGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACTCa  <  2:2762961/93‑1 (MQ=255)

                                                                                      ccGCACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACTCa  <  1:126778/93‑1 (MQ=255)

GTATGCCAATACCAACATCAGAAGAATCGGGATCAGTCCGCCAAAACCTGCGCGGATAGGGAAGAACAGCACCCCGGCGCCGATTGCCGTACCAAACAAGCCTAACGTCCATGTGGTATCTGATTTACGCCAGGACGATTGTTTTGTCTGGCTGGATACAATGCTATCTGAAGTACTCA  >  NC_000913/3262479‑3262657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`