BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	332,019	T→C	V142A (GTG→GCG)	yahA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	332,019	0	T	C	100.0%	438.7 / NA	141	V142A (GTG→GCG)	yahA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (68/73); total (68/73)

Only 100 of 149 total aligned reads displayed.

CCATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGTGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATAA  >  NC_000913/331929‑332108

 cATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCt                                                                                        >  1:1100803/1‑93 (MQ=255)

 cATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCt                                                                                        <  1:4453319/93‑1 (MQ=255)

  aTCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCtt                                                                                       >  2:3901604/1‑93 (MQ=255)

  aTCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCtt                                                                                       >  1:2236973/1‑93 (MQ=255)

  aTCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCtt                                                                                       >  2:569522/1‑93 (MQ=255)

   tCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTg                                                                                      >  1:1084582/1‑93 (MQ=255)

   tCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTg                                                                                      >  2:2566011/1‑93 (MQ=255)

   tCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTg                                                                                      >  1:2382710/1‑93 (MQ=255)

     aGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTc                                                                                    <  2:3124481/93‑1 (MQ=255)

      gTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTcc                                                                                   >  1:3496197/1‑93 (MQ=255)

      gTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTcc                                                                                   <  2:2052899/93‑1 (MQ=255)

      gTCTGGCGTTGGAAAACCACGAATTCAAACCGNGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTcc                                                                                   <  2:3557350/93‑1 (MQ=255)

        cTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGc                                                                                 <  1:1054453/93‑1 (MQ=255)

         tGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCt                                                                                >  2:4146376/1‑93 (MQ=255)

                 gAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACAt                                                                        >  2:335850/1‑93 (MQ=255)

                 gAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACAt                                                                        >  2:680969/1‑93 (MQ=255)

                  aaaaCCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATc                                                                       <  1:691419/93‑1 (MQ=255)

                   aaaCCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATcc                                                                      >  1:1204388/1‑93 (MQ=255)

                   aaaCCACGAATTCAAACCGTGGATCCAACCGGTATTCTGCGCGCAGACTGGCGCACTGACGGGCTGTCAGGCGCTTGTCCGCTTGGAACaccg                                                                      >  1:272457/1‑90 (MQ=255)

                      ccACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCcaca                                                                   >  2:3170004/1‑93 (MQ=255)

                       cACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACaa                                                                  >  1:3728327/1‑93 (MQ=255)

                       cACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACaa                                                                  <  1:3181042/93‑1 (MQ=255)

                       cACGAATGCAAACCGTGGATCCAGCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACaa                                                                  <  2:1170252/93‑1 (MQ=255)

                        aCGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACaaa                                                                 <  1:511400/93‑1 (MQ=255)

                        aCGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACaaa                                                                 >  1:2736761/1‑93 (MQ=255)

                        aCGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACaaa                                                                 <  2:2440110/93‑1 (MQ=255)

                         cGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAAc                                                                <  2:359317/93‑1 (MQ=255)

                            aTTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACggg                                                             >  1:3572253/1‑93 (MQ=255)

                            aTTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACggg                                                             >  1:2895543/1‑93 (MQ=255)

                              tCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCTCTTGTCCGCTGGGAACATCCACAAACGGGaa                                                           >  1:899905/1‑93 (MQ=255)

                              tCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGaa                                                           <  2:4350170/93‑1 (MQ=255)

                              tCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGaa                                                           <  2:2871292/93‑1 (MQ=255)

                              tCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGaa                                                           >  1:539697/1‑93 (MQ=255)

                               cAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAAt                                                          <  1:2391802/93‑1 (MQ=255)

                                 aaCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTa                                                        <  2:1422096/93‑1 (MQ=255)

                                 aaCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTa                                                        <  1:2543117/93‑1 (MQ=255)

                                  aCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTAt                                                       >  1:3859724/1‑93 (MQ=255)

                                  aCCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTAt                                                       >  2:4446050/1‑93 (MQ=255)

                                   ccGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGGATTATc                                                      >  2:908872/1‑93 (MQ=255)

                                   ccGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATc                                                      <  2:3614349/93‑1 (MQ=255)

                                   ccGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATc                                                      <  2:2070067/93‑1 (MQ=255)

                                    cGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATcc                                                     <  1:1292231/93‑1 (MQ=255)

                                    cGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATcc                                                     <  1:3734395/93‑1 (MQ=255)

                                      tGGATCCACCCGTTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTAAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCa                                                   <  2:2178005/93‑1 (MQ=255)

                                      tGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATccac                                                   >  1:1602721/1‑91 (MQ=255)

                                      tGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCa                                                   <  1:1684635/93‑1 (MQ=255)

                                      tGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCa                                                   >  2:1571817/1‑93 (MQ=255)

                                        gATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCAcc                                                 <  2:3427944/93‑1 (MQ=255)

                                        gATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCAcc                                                 <  2:2153279/93‑1 (MQ=255)

                                         aTCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCg                                                >  1:913169/1‑93 (MQ=255)

                                            cAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGAt                                             >  1:4551126/1‑93 (MQ=255)

                                             aaCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATc                                            <  1:1546594/93‑1 (MQ=255)

                                             aaCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATc                                            <  2:4417368/93‑1 (MQ=255)

                                             aaCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATc                                            >  2:4232075/1‑93 (MQ=255)

                                              aCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCCCAAAACGGAATTATCCCACCGGATCa                                           >  2:3229181/1‑93 (MQ=255)

                                              aCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCa                                           <  1:3240271/93‑1 (MQ=255)

                                              aCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCa                                           >  1:2315390/1‑93 (MQ=255)

                                              aCCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCa                                           <  2:707526/93‑1 (MQ=255)

                                                cGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGt                                         >  1:3143599/1‑93 (MQ=255)

                                                cGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGt                                         <  1:3758939/93‑1 (MQ=255)

                                                cGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCACACCGGATCAGt                                         >  1:2034079/1‑93 (MQ=255)

                                                 ggTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGtt                                        >  1:3588908/1‑93 (MQ=255)

                                                  gTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGttt                                       >  1:4414733/1‑93 (MQ=255)

                                                   ttttCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTa                                      <  2:3258641/93‑1 (MQ=255)

                                                   ttttCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTa                                      <  1:4337526/93‑1 (MQ=255)

                                                      tCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTc                                   <  2:964779/93‑1 (MQ=255)

                                                      tCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTc                                   <  1:2569317/93‑1 (MQ=255)

                                                         gcgcgcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCctc                                >  2:2670511/1‑93 (MQ=255)

                                                          cgcgcAGACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCctct                               <  2:2644333/93‑1 (MQ=255)

                                                                gACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGa                         <  1:1325640/93‑1 (MQ=255)

                                                                gACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGa                         <  1:1382308/93‑1 (MQ=255)

                                                                gACTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATAAGTTTGTGCCTATGGCggg                         >  2:2536269/1‑92 (MQ=255)

                                                                 aCTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAg                        <  2:1829997/93‑1 (MQ=255)

                                                                  cTGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGt                       <  2:1003715/93‑1 (MQ=255)

                                                                   tGGCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTc                      <  2:2959457/93‑1 (MQ=255)

                                                                    ggCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCa                     >  1:1551139/1‑93 (MQ=255)

                                                                    ggCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCa                     >  1:2741221/1‑93 (MQ=255)

                                                                     gCGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCAt                    >  2:458077/1‑93 (MQ=255)

                                                                      cGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATc                   <  1:2100275/93‑1 (MQ=255)

                                                                      cGTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCAAAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATc                   <  1:358405/93‑1 (MQ=255)

                                                                       gTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATcc                  <  1:1297099/93‑1 (MQ=255)

                                                                       gTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATcc                  <  2:2411533/93‑1 (MQ=255)

                                                                       gTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATcc                  <  2:1961002/93‑1 (MQ=255)

                                                                       gTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATcc                  <  1:3114337/93‑1 (MQ=255)

                                                                       gTACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATcc                  <  2:1470922/93‑1 (MQ=255)

                                                                        tACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCg                 >  1:326555/1‑93 (MQ=255)

                                                                        tACTGACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCg                 >  1:629629/1‑93 (MQ=255)

                                                                            gACGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCt             >  1:2990472/1‑93 (MQ=255)

                                                                              cGGGCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTa           <  1:628832/93‑1 (MQ=255)

                                                                                ggCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTAtt         >  2:4060479/1‑93 (MQ=255)

                                                                                ggCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTAtt         <  1:27355/93‑1 (MQ=255)

                                                                                 gCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTg        <  1:1192915/93‑1 (MQ=255)

                                                                                 gCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTg        >  1:309255/1‑93 (MQ=255)

                                                                                 gCTGTGAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTg        <  2:379374/93‑1 (MQ=255)

                                                                                    gtgAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCa     <  2:1603132/93‑1 (MQ=255)

                                                                                    gtgAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGAGCAGTTTATTCCTCTGGCGGAGTCATCCGGTTTTATTGTCa     <  2:1461117/93‑1 (MQ=255)

                                                                                     tgAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCAt    >  2:3549827/1‑93 (MQ=255)

                                                                                     tgAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCAt    >  1:4194693/1‑93 (MQ=255)

                                                                                      gAGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATa   <  2:1014224/93‑1 (MQ=255)

                                                                                       aGGCGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATaa  <  1:4630424/93‑1 (MQ=255)

CCATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGTGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATAA  >  NC_000913/331929‑332108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`