BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	332,530	T→C	P312P (CCT→CCC)	yahA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	332,530	0	T	C	100.0%	477.2 / NA	153	P312P (CCT→CCC)	yahA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (69/84); total (69/84)

Only 100 of 158 total aligned reads displayed.

TAAGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCTGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTATTT  >  NC_000913/332440‑332619

taAGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCgg                                                                                         <  1:494055/93‑1 (MQ=255)

  aGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTc                                                                                       <  2:3493272/93‑1 (MQ=255)

    aTCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTg                                                                                     >  1:572888/1‑93 (MQ=255)

    aTCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGACCGGTCTg                                                                                     >  2:2461598/1‑93 (MQ=255)

    aTCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACAAAATCTCCGGTCATATTGTGGAAAATATTGTCGAACTAGCGCGTAAGCCCGGTCTg                                                                                     <  1:4422017/93‑1 (MQ=255)

       gATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGt                                                                                  >  1:3796005/1‑93 (MQ=255)

       gATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGt                                                                                  >  1:4667225/1‑93 (MQ=255)

       gATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGt                                                                                  <  2:1027968/93‑1 (MQ=255)

       gATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGt                                                                                  >  2:4179715/1‑93 (MQ=255)

         tAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTAt                                                                                >  1:1681568/1‑93 (MQ=255)

         tAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTAt                                                                                <  2:4211516/93‑1 (MQ=255)

         tAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGCCTGAGTAt                                                                                >  1:268739/1‑93 (MQ=255)

          aaGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATc                                                                               <  2:4484903/93‑1 (MQ=255)

            gTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGt                                                                             <  1:847932/93‑1 (MQ=255)

              cATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTgg                                                                           >  1:3995421/1‑93 (MQ=255)

              cATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTgg                                                                           >  2:2546932/1‑93 (MQ=255)

              cATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTgg                                                                           >  2:1268200/1‑93 (MQ=255)

               aTTTGTGCAAATGGCGAGTGTCGACGAAATCTCCCGTCATATTGTGGGCCATATTGTCGAACTAGCGCGGAAGCCCCGTCTCAGTATCGTGGc                                                                          >  2:2018565/1‑93 (MQ=255)

               aTTTGTGCAAATGCCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGc                                                                          <  1:1195482/93‑1 (MQ=255)

                tttGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCg                                                                         >  2:1938214/1‑93 (MQ=255)

                   gtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGaa                                                                      >  1:2127936/1‑93 (MQ=255)

                   gtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGaa                                                                      >  2:4352780/1‑93 (MQ=255)

                   gtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGaa                                                                      <  2:4583919/93‑1 (MQ=255)

                   gtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGaa                                                                      >  2:4245623/1‑93 (MQ=255)

                    tgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAg                                                                     >  1:2500528/1‑93 (MQ=255)

                    tgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAg                                                                     <  2:3706912/93‑1 (MQ=255)

                      cAAATGGCGAGTTTCGAAGAAATCTCCGGTCGTTTTGTGGACAATATTGTCGACCTAGCGCGCAAGCCCGGTCTGAGTATCGTGGCGGAAggg                                                                   >  2:2342101/1‑93 (MQ=255)

                      cAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAggg                                                                   <  2:1878034/93‑1 (MQ=255)

                       aaaTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAgggg                                                                  <  1:3602868/93‑1 (MQ=255)

                        aaTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGt                                                                 <  1:999742/93‑1 (MQ=255)

                         aTGTCGAGGGTCGACGAAATCTCCTGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTa                                                                <  1:1529803/93‑1 (MQ=255)

                         aTGGCGAGTGTCGACGAAATCTCCGGTCATATTTTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTa                                                                <  2:4052101/93‑1 (MQ=255)

                         aTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTa                                                                <  2:4486119/93‑1 (MQ=255)

                          tGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAg                                                               >  2:903974/1‑93 (MQ=255)

                          tGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAg                                                               >  1:3387796/1‑93 (MQ=255)

                           ggCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGa                                                              <  2:277299/93‑1 (MQ=255)

                            gCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGaa                                                             <  1:3020889/93‑1 (MQ=255)

                               aGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAAcc                                                          >  2:3481320/1‑93 (MQ=255)

                                gtgtCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAAccc                                                         <  2:850383/93‑1 (MQ=255)

                                   tCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAgg                                                      <  1:3957529/93‑1 (MQ=255)

                                   tCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAgg                                                      >  2:3009096/1‑93 (MQ=255)

                                    cgacgaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGa                                                     <  2:3883636/93‑1 (MQ=255)

                                      acgaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGc                                                   >  2:2120295/1‑93 (MQ=255)

                                       cgaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCa                                                  <  1:3107078/93‑1 (MQ=255)

                                        gaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAg                                                 <  2:236175/93‑1 (MQ=255)

                                        gaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAg                                                 <  2:3957368/93‑1 (MQ=255)

                                         aaaTCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAgg                                                >  1:2145559/1‑93 (MQ=255)

                                         aaaTCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAgg                                                <  1:2719099/93‑1 (MQ=255)

                                          aaTCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGc                                               >  2:732076/1‑93 (MQ=255)

                                          aaTCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGc                                               <  2:1558912/93‑1 (MQ=255)

                                          aaTCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGGAGAAACCCAAGAGCAGGc                                               >  1:1444836/1‑93 (MQ=255)

                                              tcCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGAt                                           <  1:2091627/93‑1 (MQ=255)

                                              tcCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGAt                                           <  1:1327784/93‑1 (MQ=255)

                                              tcCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGAt                                           <  2:1331557/93‑1 (MQ=255)

                                              tcCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGAt                                           <  2:1512144/93‑1 (MQ=255)

                                              tcCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGCCTGAGTATCGTGGCGGAAGGGGGAGAAACACAGGAGGAGGCgggt                                           >  2:2491911/1‑91 (MQ=255)

                                                cGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGAttt                                         <  2:51315/93‑1 (MQ=255)

                                                  gTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTaa                                       <  1:1108465/93‑1 (MQ=255)

                                                  gTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTaa                                       >  1:1856597/1‑93 (MQ=255)

                                                    cATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATg                                     <  2:3892113/93‑1 (MQ=255)

                                                    cATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATg                                     >  2:744414/1‑93 (MQ=255)

                                                    cATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATg                                     <  2:3179028/93‑1 (MQ=255)

                                                     atatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGa                                    <  2:2243121/93‑1 (MQ=255)

                                                     atatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGa                                    >  1:4426118/1‑93 (MQ=255)

                                                      tatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGAt                                   <  1:2526773/93‑1 (MQ=255)

                                                       atTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGAtg                                  >  1:4367978/1‑92 (MQ=255)

                                                       atTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATc                                  <  1:2417524/93‑1 (MQ=255)

                                                         tgtgGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCgg                                <  2:3652954/93‑1 (MQ=255)

                                                             gACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTaaa                            >  1:406842/1‑93 (MQ=255)

                                                             gACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTaaa                            <  1:3000420/93‑1 (MQ=255)

                                                             gACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTaaa                            <  1:326791/93‑1 (MQ=255)

                                                                aaTATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGc                         >  1:1231870/1‑93 (MQ=255)

                                                                aaTATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGc                         >  2:3806103/1‑93 (MQ=255)

                                                                aaTATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGc                         <  1:163581/93‑1 (MQ=255)

                                                                 atatTGTCGAACTAGCGCGTAACCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCg                        <  2:4377876/93‑1 (MQ=255)

                                                                   atTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGtt                      >  2:2804030/1‑93 (MQ=255)

                                                                   atTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGtt                      >  1:2882986/1‑93 (MQ=255)

                                                                    ttGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTc                     >  1:1784515/1‑93 (MQ=255)

                                                                     tGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCa                    <  1:2398167/93‑1 (MQ=255)

                                                                       tCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACt                  >  2:835440/1‑93 (MQ=255)

                                                                        cGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtt                 <  2:3984882/93‑1 (MQ=255)

                                                                        cGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtt                 <  1:1058725/93‑1 (MQ=255)

                                                                         gAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttt                <  2:208771/93‑1 (MQ=255)

                                                                         gAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttt                <  2:3233427/93‑1 (MQ=255)

                                                                          aaCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtttt               >  1:1576601/1‑93 (MQ=255)

                                                                           aCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttttt              <  1:874280/93‑1 (MQ=255)

                                                                            cTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACCTTTTg             >  2:1091863/1‑93 (MQ=255)

                                                                             tAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGc            >  1:3704317/1‑93 (MQ=255)

                                                                              aGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCa           <  1:2622755/93‑1 (MQ=255)

                                                                                cgcgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAGACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAgg         <  2:1211458/93‑1 (MQ=255)

                                                                                cgcgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAgg         <  2:2443488/93‑1 (MQ=255)

                                                                                  cgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGc       <  2:3789377/93‑1 (MQ=255)

                                                                                  cgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGc       <  1:1303445/93‑1 (MQ=255)

                                                                                  cgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGc       <  2:520463/93‑1 (MQ=255)

                                                                                  cgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGc       <  1:4257569/93‑1 (MQ=255)

                                                                                   gTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCt      <  1:1905772/93‑1 (MQ=255)

                                                                                    tAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTa     >  1:2007340/1‑93 (MQ=255)

                                                                                    tAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTa     >  2:13820/1‑93 (MQ=255)

                                                                                       gCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTAttt  <  1:2243081/93‑1 (MQ=255)

                                                                                       gCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTAttt  >  2:3511572/1‑93 (MQ=255)

TAAGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCTGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTATTT  >  NC_000913/332440‑332619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`