BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	333,313	T→C	L115L (TTA→TTG)	yahB ←	putative transcriptional regulator LYSR‑type

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	333,313	0	T	C	100.0%	563.5 / NA	178	L115L (TTA→TTG)	yahB	putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (100/78); total (100/78)

Only 100 of 186 total aligned reads displayed.

CTGATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGTAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATCGAT  >  NC_000913/333223‑333402

cTGATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCaa                                                                                         <  2:4098572/93‑1 (MQ=255)

cTGATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCaa                                                                                         >  2:2371821/1‑93 (MQ=255)

 tGATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAAc                                                                                        >  2:3646764/1‑93 (MQ=255)

 tGATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAAc                                                                                        >  2:146550/1‑93 (MQ=255)

 tGATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAAc                                                                                        >  2:1177562/1‑93 (MQ=255)

  gATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACa                                                                                       >  2:1089706/1‑93 (MQ=255)

   attattAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGcaacaa                                                                                      <  1:2052084/93‑1 (MQ=255)

    ttattaATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAg                                                                                     >  2:4402146/1‑93 (MQ=255)

     tattaATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGc                                                                                    >  2:98595/1‑93 (MQ=255)

     tattaATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGc                                                                                    >  2:227210/1‑93 (MQ=255)

     tattaATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGc                                                                                    >  1:458220/1‑93 (MQ=255)

       ttaATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGt                                                                                  <  1:933602/93‑1 (MQ=255)

         aataatCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGc                                                                                <  1:2824098/93‑1 (MQ=255)

           taatCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCgg                                                                              >  2:348094/1‑93 (MQ=255)

            aatCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGgt                                                                             >  1:3166970/1‑93 (MQ=255)

             atCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGgtg                                                                            <  1:4214559/93‑1 (MQ=255)

              tCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGgtgt                                                                           >  1:1408709/1‑93 (MQ=255)

                  aTCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGttt                                                                       <  1:2541474/93‑1 (MQ=255)

                   tCCCAGACGCAATTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTg                                                                      <  2:4490277/93‑1 (MQ=255)

                       aGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCg                                                                  >  2:1285015/1‑93 (MQ=255)

                        gACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGt                                                                 >  1:1917938/1‑93 (MQ=255)

                          cGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGtat                                                               <  1:2598387/93‑1 (MQ=255)

                            ccGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATaa                                                             <  2:3625815/93‑1 (MQ=255)

                             cGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGTGCGTATaaa                                                            >  2:2872657/1‑93 (MQ=255)

                             cGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATaaa                                                            <  1:1231206/93‑1 (MQ=255)

                             cGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATaaa                                                            <  2:1809339/93‑1 (MQ=255)

                              gTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAag                                                           >  2:482017/1‑93 (MQ=255)

                              gTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAag                                                           >  2:3905689/1‑93 (MQ=255)

                               ttATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAagc                                                          >  1:1012607/1‑93 (MQ=255)

                               ttATACACTTCGGCGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTCTGGGCGTATAAagc                                                          >  2:2539484/1‑93 (MQ=255)

                                tataCACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAagca                                                         <  2:2029908/93‑1 (MQ=255)

                                tataCACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAagca                                                         >  1:61500/1‑93 (MQ=255)

                                tataCACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAagca                                                         <  2:3542058/93‑1 (MQ=255)

                                  taCACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAagcagc                                                       <  2:1764194/93‑1 (MQ=255)

                                   acacTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCt                                                      >  1:1678745/1‑93 (MQ=255)

                                    cacTTCGGTGGTGAGGGTAATCTGGCATGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTg                                                     <  1:2231819/93‑1 (MQ=255)

                                    cacTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTg                                                     <  2:2270176/93‑1 (MQ=255)

                                     acTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGa                                                    >  2:4185038/1‑93 (MQ=255)

                                      cTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGAt                                                   >  1:2886631/1‑93 (MQ=255)

                                      cTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGAt                                                   <  2:1247029/93‑1 (MQ=255)

                                       ttCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGAtt                                                  >  2:2619203/1‑93 (MQ=255)

                                          ggtggtGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAAt                                               <  1:1766104/93‑1 (MQ=255)

                                          ggtggtGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAAt                                               <  1:822773/93‑1 (MQ=255)

                                           gtggtgACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATa                                              <  1:3932458/93‑1 (MQ=255)

                                           gtggtgACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATa                                              <  1:4253748/93‑1 (MQ=255)

                                            tggtgACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAGCAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATAc                                             <  1:1039408/93‑1 (MQ=255)

                                             ggtgACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACa                                            >  1:1288580/1‑93 (MQ=255)

                                              gtgACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACaa                                           >  2:2497675/1‑93 (MQ=255)

                                               tgACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACaaa                                          <  2:3778513/93‑1 (MQ=255)

                                               tgACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACaaa                                          <  1:4144542/93‑1 (MQ=255)

                                                gACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAAt                                         <  1:3470027/93‑1 (MQ=255)

                                                 aCGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATg                                        <  1:3408556/93‑1 (MQ=255)

                                                  cGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATgc                                       >  1:3923688/1‑93 (MQ=255)

                                                  cGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATgc                                       >  2:826136/1‑93 (MQ=255)

                                                   ggTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATgcg                                      >  1:240045/1‑93 (MQ=255)

                                                    gTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATgcgc                                     >  1:3225676/1‑93 (MQ=255)

                                                       aTCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGcaca                                  <  1:3436238/93‑1 (MQ=255)

                                                          tGGCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACAcgc                               >  2:2158853/1‑93 (MQ=255)

                                                            gCAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACgcgc                             >  2:2774598/1‑93 (MQ=255)

                                                             cAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCt                            <  2:3158166/93‑1 (MQ=255)

                                                             cAGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCt                            >  2:59436/1‑93 (MQ=255)

                                                              aGGTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCtt                           <  2:3199401/93‑1 (MQ=255)

                                                                gTAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCt                         >  1:1484714/1‑93 (MQ=255)

                                                                 tAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTa                        <  2:4540601/93‑1 (MQ=255)

                                                                 tAGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTa                        <  1:3105763/93‑1 (MQ=255)

                                                                  aGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTAt                       <  1:161604/93‑1 (MQ=255)

                                                                  aGGAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTAt                       >  1:1973644/1‑93 (MQ=255)

                                                                   ggAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATg                      >  1:2125531/1‑93 (MQ=255)

                                                                    gAAACTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGc                     <  2:3006388/93‑1 (MQ=255)

                                                                     aaaCTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGcc                    <  1:560392/93‑1 (MQ=255)

                                                                     aaaCTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGcc                    >  1:1767082/1‑93 (MQ=255)

                                                                      aaCTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGccc                   <  1:2455892/93‑1 (MQ=255)

                                                                      aaCTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGccc                   >  1:713024/1‑93 (MQ=255)

                                                                        cTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTg                 >  1:1498192/1‑93 (MQ=255)

                                                                        cTGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTg                 >  1:1443448/1‑93 (MQ=255)

                                                                         tGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGTGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGc                >  1:1077452/1‑93 (MQ=255)

                                                                         tGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGGCCTGc                >  2:3203814/1‑93 (MQ=255)

                                                                         tGCTTTTTCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGc                >  2:1491520/1‑93 (MQ=255)

                                                                            tttttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGaa             >  2:1451583/1‑93 (MQ=255)

                                                                            tttttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGaa             >  1:1579287/1‑93 (MQ=255)

                                                                            tttttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGaa             >  2:2222744/1‑93 (MQ=255)

                                                                            tttttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGaa             >  1:4422615/1‑93 (MQ=255)

                                                                             ttttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGaca            >  2:4337115/1‑91 (MQ=255)

                                                                             ttttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGaaa            <  1:1742393/93‑1 (MQ=255)

                                                                             ttttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGAACACGCGCTTCTATGCCCGGCGaaa            >  2:1184003/1‑93 (MQ=255)

                                                                               ttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATa          <  2:3095005/93‑1 (MQ=255)

                                                                               ttCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATa          <  1:2702915/93‑1 (MQ=255)

                                                                                tCAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAg         <  1:3496769/93‑1 (MQ=255)

                                                                                 cAGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGt        >  2:2837324/1‑93 (MQ=255)

                                                                                  aGCCCCTGCAACAAGCGTGCCGTGTGTTTGCGCCTATAAACCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTa       <  2:1927281/93‑1 (MQ=255)

                                                                                  aGCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTa       >  1:1550401/1‑93 (MQ=255)

                                                                                   gCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTAt      >  1:492901/1‑93 (MQ=255)

                                                                                   gCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTAt      <  1:4496576/93‑1 (MQ=255)

                                                                                   gCACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTAt      >  2:2805319/1‑93 (MQ=255)

                                                                                    cACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATc     <  2:1723378/93‑1 (MQ=255)

                                                                                    cACCTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATc     <  2:3455062/93‑1 (MQ=255)

                                                                                      ccTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATCGa   <  2:3774795/93‑1 (MQ=255)

                                                                                       cTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATCGAt  <  2:4016783/93‑1 (MQ=255)

                                                                                       cTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATCGAt  <  2:4239914/93‑1 (MQ=255)

                                                                                       cTGCAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATCGAt  >  2:2946421/1‑93 (MQ=255)

CTGATTATTAATAATCGCATCCCAGACGCCGTTATACACTTCGGTGGTGACGGTAATCTGGCAGGTAGGAAACTGCTTTTTCAGCACCTGTAACAAGCGTGCGGTGTGTTTGGGCGTATAAAGCAGCTGATTAATACAAATGCGCACACGCGCTTCTATGCCCTGCGAAATAGTATCGAT  >  NC_000913/333223‑333402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`