BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,309,164	A→G	R54R (CGT→CGC)	rpsO ←	30S ribosomal subunit protein S15

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,309,164	0	A	G	100.0%	630.7 / NA	199	R54R (CGT→CGC)	rpsO	30S ribosomal subunit protein S15
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/97); total (102/97)

Only 100 of 215 total aligned reads displayed.

GCGCTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCACGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGT  >  NC_000913/3309074‑3309253

 cgcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcga                                                                                        <  1:1322713/93‑1 (MQ=255)

  gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       >  1:1118133/1‑93 (MQ=255)

  gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  1:4391929/93‑1 (MQ=255)

  gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       >  2:1346262/1‑93 (MQ=255)

  gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  2:3535988/93‑1 (MQ=255)

  gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  2:3722185/93‑1 (MQ=255)

      gATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCt                                                                                   >  2:2428962/1‑93 (MQ=255)

        tGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtgt                                                                                 <  2:885447/93‑1 (MQ=255)

           gCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggt                                                                              <  1:3272917/93‑1 (MQ=255)

             tGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGa                                                                            <  1:3522629/93‑1 (MQ=255)

              gggTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGAt                                                                           >  1:2729827/1‑93 (MQ=255)

                 tgtAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCtt                                                                        <  1:4028158/93‑1 (MQ=255)

                  gtAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCttt                                                                       >  2:3851498/1‑93 (MQ=255)

                   tgaCGTGCTACGTCTTTACGTTTCAGGTAGCCGAGCAGTTTACGACGCTGAGAAACCACGCGCAGCAGACCGCGACGGCTGTGGTGATCtttt                                                                      >  1:4529109/3‑93 (MQ=255)

                    aaCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCttttt                                                                     >  1:1296752/1‑93 (MQ=255)

                    aaCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCttttt                                                                     >  2:2911489/1‑93 (MQ=255)

                    aaCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCttttt                                                                     <  1:3102219/93‑1 (MQ=255)

                    aaCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCttttt                                                                     <  2:1802350/93‑1 (MQ=255)

                     aCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCtttttt                                                                    <  2:3973747/93‑1 (MQ=255)

                      cGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTtg                                                                   <  1:2990623/93‑1 (MQ=255)

                      cGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTtg                                                                   >  2:4469182/1‑93 (MQ=255)

                        tGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTtgtg                                                                 <  1:1483015/93‑1 (MQ=255)

                         gCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGc                                                                >  1:2262985/1‑93 (MQ=255)

                          cTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGct                                                               <  1:2367900/93‑1 (MQ=255)

                           tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              >  1:4537664/1‑93 (MQ=255)

                           tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              >  1:753216/1‑93 (MQ=255)

                           tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              >  2:3689467/1‑93 (MQ=255)

                            tcGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctct                                                             <  1:231083/92‑1 (MQ=255)

                            aCGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGGGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctct                                                             >  2:1928320/1‑93 (MQ=255)

                            aCGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctct                                                             >  1:673020/1‑93 (MQ=255)

                            aCGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctct                                                             <  2:2866914/93‑1 (MQ=255)

                            aCGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctct                                                             <  1:1636861/93‑1 (MQ=255)

                             cGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTg                                                            >  1:1243445/1‑93 (MQ=255)

                               tCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCa                                                          >  2:2159251/1‑93 (MQ=255)

                               tCTTTACGTTTCAGGTAGGCGAGCAGTTTACGACGCTGAGAAACCATGCCCAGCAGACCGCGACGGCCGGGGGGGTCTTTTTTGTGCTCTGCa                                                          >  2:363506/1‑93 (MQ=255)

                                 tttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCaaa                                                        >  2:3259386/1‑93 (MQ=255)

                                 tttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCaaa                                                        <  1:1431926/93‑1 (MQ=255)

                                 tttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCaaa                                                        <  2:1253956/93‑1 (MQ=255)

                                  ttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCACAg                                                       >  1:141173/1‑93 (MQ=255)

                                  ttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAg                                                       >  1:2526430/1‑93 (MQ=255)

                                   tACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGt                                                      <  1:4569229/93‑1 (MQ=255)

                                   tACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGt                                                      <  1:3205679/93‑1 (MQ=255)

                                    aCGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTg                                                     >  1:1025911/1‑93 (MQ=255)

                                    aCGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTg                                                     <  2:1532705/93‑1 (MQ=255)

                                      gTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGc                                                   >  1:2342297/1‑93 (MQ=255)

                                      gTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGc                                                   >  1:4108914/1‑93 (MQ=255)

                                        ttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGccc                                                 <  2:722531/93‑1 (MQ=255)

                                            ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             >  2:3457909/1‑93 (MQ=255)

                                            ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             <  2:3943676/93‑1 (MQ=255)

                                            ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             <  1:3152583/93‑1 (MQ=255)

                                            ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             >  1:3819705/1‑93 (MQ=255)

                                               aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          >  1:4253142/1‑93 (MQ=255)

                                               aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          <  1:986122/93‑1 (MQ=255)

                                               aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          <  2:4334605/93‑1 (MQ=255)

                                               aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          <  1:1579162/93‑1 (MQ=255)

                                               aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          <  2:3175309/93‑1 (MQ=255)

                                                 tCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACAGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggtgg                                        <  2:2965638/93‑1 (MQ=255)

                                                  cGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggtggt                                       >  2:1768408/1‑93 (MQ=255)

                                                   gAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGtt                                      >  1:2691847/1‑93 (MQ=255)

                                                    aGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTg                                     >  1:484582/1‑93 (MQ=255)

                                                     gCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGa                                    <  2:648508/93‑1 (MQ=255)

                                                     gCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGa                                    >  2:1630671/1‑93 (MQ=255)

                                                       aGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATc                                  <  2:2571404/93‑1 (MQ=255)

                                                        gTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCt                                 >  1:1263837/1‑93 (MQ=255)

                                                         tttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGCTCtg                                >  1:835137/1‑93 (MQ=255)

                                                         tttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtg                                >  1:2511353/1‑93 (MQ=255)

                                                          ttACGACTCTAAGAACCGATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCTCTGCATGTGGTTGATCtgt                               <  2:3003754/93‑1 (MQ=255)

                                                          ttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtgt                               <  2:2709552/93‑1 (MQ=255)

                                                          ttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtgt                               <  2:1960409/93‑1 (MQ=255)

                                                            acgacgCTGAGAAACCATGCGCAGCAGCCCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCACTGCAGGTGGTTGATCTGTGc                             <  2:231545/93‑1 (MQ=255)

                                                            acgacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGc                             >  2:1539836/1‑93 (MQ=255)

                                                             cgacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCa                            <  2:3304569/93‑1 (MQ=255)

                                                             cgacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCa                            <  1:734534/93‑1 (MQ=255)

                                                              gacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAg                           <  1:4145093/93‑1 (MQ=255)

                                                              gacgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAg                           >  1:685847/1‑93 (MQ=255)

                                                                cgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTc                         <  1:1962354/93‑1 (MQ=255)

                                                                 gCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTca                        <  1:1216063/93‑1 (MQ=255)

                                                                 gCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTca                        >  2:419029/1‑93 (MQ=255)

                                                                  cTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcag                       >  2:602563/1‑93 (MQ=255)

                                                                   tGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagc                      >  2:825515/1‑93 (MQ=255)

                                                                   tGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagc                      >  2:960686/1‑93 (MQ=255)

                                                                   tGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagc                      >  2:438135/1‑93 (MQ=255)

                                                                    gagaAACCATGCGCAGCAGACCGCGAGGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagca                     >  2:2752598/1‑93 (MQ=255)

                                                                    gagaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagca                     >  1:1149848/1‑93 (MQ=255)

                                                                    gagaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagca                     >  2:1032261/1‑93 (MQ=255)

                                                                        aaCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGc                 >  2:1435317/1‑93 (MQ=255)

                                                                         aCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCt                >  1:3398115/1‑93 (MQ=255)

                                                                                 cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        >  1:1667678/1‑93 (MQ=255)

                                                                                 cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  2:1170675/93‑1 (MQ=255)

                                                                                 cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  1:3342421/93‑1 (MQ=255)

                                                                                 cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        >  1:1994579/1‑93 (MQ=255)

                                                                                 cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  2:2098280/93‑1 (MQ=255)

                                                                                 cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  1:4447712/93‑1 (MQ=255)

                                                                                  agcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACt       >  1:2551774/1‑93 (MQ=255)

                                                                                   gcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAGAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACtt      >  1:379766/1‑93 (MQ=255)

                                                                                   gcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACtt      >  2:35303/1‑93 (MQ=255)

                                                                                    cagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTc     <  2:526477/93‑1 (MQ=255)

                                                                                      gACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCgg   >  2:3740130/1‑93 (MQ=255)

                                                                                      gACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCgg   >  1:4347746/1‑93 (MQ=255)

                                                                                       aCCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGt  <  1:1821133/93‑1 (MQ=255)

GCGCTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCACGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGT  >  NC_000913/3309074‑3309253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`