BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,352,410	C→T	I48I (ATC→ATT)	gltB →	glutamate synthase large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,352,410	0	C	T	100.0%	678.9 / NA	189	I48I (ATC→ATT)	gltB	glutamate synthase large subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (101/88); total (101/88)

Only 100 of 194 total aligned reads displayed.

GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352320‑3352499

ggAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGc                                                                                         <  1:1655913/93‑1 (MQ=255)

 gAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGcc                                                                                        >  1:1426863/1‑93 (MQ=255)

   aGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGcccc                                                                                      >  1:3622013/1‑92 (MQ=255)

   aGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCca                                                                                      <  2:3199786/93‑1 (MQ=255)

    ttGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcac                                                                                     >  1:1269580/2‑93 (MQ=255)

     tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                    >  2:1453982/1‑93 (MQ=255)

      ggggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt                                                                                   <  1:697475/93‑1 (MQ=255)

       gggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATa                                                                                  >  1:2192628/1‑93 (MQ=255)

        ggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAg                                                                                 <  2:3650114/93‑1 (MQ=255)

         gTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGa                                                                                >  2:1028408/1‑93 (MQ=255)

          ttCCCGCAGAGACTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                               <  2:4686547/93‑1 (MQ=255)

           tCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAg                                                                              <  1:2125489/93‑1 (MQ=255)

             ccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGc                                                                            <  2:744766/93‑1 (MQ=255)

                 agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        <  1:3820664/93‑1 (MQ=255)

                 agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        >  2:172630/1‑93 (MQ=255)

                 agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                        >  2:4367525/1‑93 (MQ=255)

                  gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                       <  1:1710214/93‑1 (MQ=255)

                  gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                       <  1:4260865/93‑1 (MQ=255)

                    gCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTa                                                                     <  2:1858099/93‑1 (MQ=255)

                    gCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTa                                                                     >  2:4533045/1‑93 (MQ=255)

                    gCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTa                                                                     <  1:838254/93‑1 (MQ=255)

                      cTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGc                                                                   <  1:746453/93‑1 (MQ=255)

                       tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                  >  2:115385/1‑93 (MQ=255)

                        gggggAGGTTCACGATATGTTGTACGATAAGTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca                                                                 <  1:4162734/93‑1 (MQ=255)

                         ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac                                                                <  1:3980981/93‑1 (MQ=255)

                           ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                              <  1:4619757/93‑1 (MQ=255)

                           ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                              >  2:4417756/1‑93 (MQ=255)

                           ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                              >  2:903723/1‑93 (MQ=255)

                            gAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAg                                                             <  1:282008/93‑1 (MQ=255)

                                ttCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGGAg                                                         >  1:3200000/1‑93 (MQ=255)

                                 tCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGt                                                        <  1:793831/93‑1 (MQ=255)

                                 tCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGt                                                        <  1:4508609/93‑1 (MQ=255)

                                  taCGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                       <  1:3106934/92‑1 (MQ=255)

                                  cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                       <  1:468229/93‑1 (MQ=255)

                                  cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                       <  2:271270/93‑1 (MQ=255)

                                  cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                       >  2:4201793/1‑93 (MQ=255)

                                   aCGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGc                                                      >  1:1999606/1‑93 (MQ=255)

                                     gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGGCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCgg                                                    >  2:2612607/1‑92 (MQ=255)

                                     gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                    <  1:1359889/93‑1 (MQ=255)

                                     gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                    >  1:4214622/1‑93 (MQ=255)

                                     gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                    >  2:1884107/1‑93 (MQ=255)

                                      atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   <  1:2457207/93‑1 (MQ=255)

                                      atatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTACCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTa                                                   >  1:1528785/1‑93 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  <  1:4339140/93‑1 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  <  1:4586628/93‑1 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  >  1:206842/1‑93 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                  <  1:1996738/93‑1 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                 <  2:691486/93‑1 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                 <  1:1012399/93‑1 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                 >  1:354776/1‑93 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                 >  1:4035314/1‑93 (MQ=255)

                                          gttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGc                                               >  2:1013212/1‑93 (MQ=255)

                                           ttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCa                                              >  1:4639684/1‑93 (MQ=255)

                                            tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa                                             >  1:4302493/1‑93 (MQ=255)

                                            tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa                                             >  2:600781/1‑93 (MQ=255)

                                             gtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAAt                                            <  2:3006461/93‑1 (MQ=255)

                                              tACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATa                                           <  2:3423368/93‑1 (MQ=255)

                                               aCGATAAATCCCTTGAGAGGGATAACTGTTGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATac                                          >  1:3371549/1‑93 (MQ=255)

                                                 gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        >  1:2742818/1‑93 (MQ=255)

                                                 gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        <  1:2999950/93‑1 (MQ=255)

                                                 gATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATacac                                        <  2:1615373/93‑1 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       >  2:2053547/1‑93 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       <  2:42929/93‑1 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                       >  1:1201379/1‑93 (MQ=255)

                                                   tAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGc                                      >  2:2569353/1‑93 (MQ=255)

                                                     aaTCCCTTGAGAGGGATAACTGTGTTTTCGGCCTGATTGCCCACATAGAAGGCGACCCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                    <  1:112409/93‑1 (MQ=255)

                                                      aTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACt                                   <  2:4340628/93‑1 (MQ=255)

                                                       tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                  >  2:3699357/1‑93 (MQ=255)

                                                         ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc                                >  1:3444698/1‑93 (MQ=255)

                                                         ccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGc                                >  2:3083669/1‑93 (MQ=255)

                                                          cTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGcc                               <  1:2101387/93‑1 (MQ=255)

                                                           ttGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGccc                              <  2:4160682/93‑1 (MQ=255)

                                                             gagaGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGc                            >  1:1771463/1‑93 (MQ=255)

                                                             gagaGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGc                            <  2:282363/93‑1 (MQ=255)

                                                               gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCGACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt                          <  2:3825126/93‑1 (MQ=255)

                                                                agGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATg                         >  1:3707539/1‑93 (MQ=255)

                                                                  ggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                       <  1:1259845/93‑1 (MQ=255)

                                                                  ggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                       <  1:2228803/93‑1 (MQ=255)

                                                                    aTAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATATTCGGACTGGACCGCATgcagc                     >  2:4281228/1‑93 (MQ=255)

                                                                    aTAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagc                     >  1:1368878/1‑93 (MQ=255)

                                                                    aTAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagc                     <  1:3747228/93‑1 (MQ=255)

                                                                     tAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagca                    >  2:1281781/1‑93 (MQ=255)

                                                                      aaCTGTGGTTTCGGCGTGATTGCCAACATAGAAGGCAACCCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAc                   <  2:2459722/93‑1 (MQ=255)

                                                                      aaCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAc                   >  2:3715841/1‑93 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 >  2:2535234/1‑93 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 <  2:3472726/93‑1 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                 >  2:1563550/1‑93 (MQ=255)

                                                                         tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt                <  1:1911927/93‑1 (MQ=255)

                                                                             gTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGgcg            <  2:2247437/93‑1 (MQ=255)

                                                                             gTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGgcg            >  1:3617735/1‑93 (MQ=255)

                                                                              tttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCACGCATGCAGCACCGTGgcgc           >  1:623735/1‑93 (MQ=255)

                                                                               ttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGcgcg          >  1:1027530/1‑93 (MQ=255)

                                                                                tCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGa         >  1:2940372/1‑93 (MQ=255)

                                                                                 cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAt        <  2:2343500/93‑1 (MQ=255)

                                                                                  ggCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAtt       >  2:2808789/1‑93 (MQ=255)

                                                                                  ggCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAtt       >  1:2007201/1‑93 (MQ=255)

                                                                                    ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct     <  2:4602390/93‑1 (MQ=255)

                                                                                     cTGATTGCCCACATAGAAGGCGAAGCTAGACACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGGACCGTGGCGCGATtctc    >  2:1419054/1‑93 (MQ=255)

                                                                                      tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg   >  1:447561/1‑93 (MQ=255)

                                                                                       gATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGc  >  1:1619252/1‑93 (MQ=255)

GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGC  >  NC_000913/3352320‑3352499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`