BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	339,531	T→C	V48A (GTG→GCG)	yahI →	putative kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	339,531	0	T	C	100.0%	546.3 / NA	172	V48A (GTG→GCG)	yahI	putative kinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (86/86); total (86/86)

Only 100 of 180 total aligned reads displayed.

ACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGTGCTGGAAATGCTGGCTTCCGATTACGACATTGTGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAACGCCGC  >  NC_000913/339441‑339620

aCGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGGAATGCTGGCTTCCGGTTACGACATTgcgc                                                                                         >  1:1271296/1‑93 (MQ=255)

aCGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTgcgc                                                                                         <  2:2241411/93‑1 (MQ=255)

aCGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTgcgc                                                                                         <  2:4423295/93‑1 (MQ=255)

aCGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTgcgc                                                                                         >  1:1732890/1‑93 (MQ=255)

    cagccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAc                                                                                     >  1:467042/1‑93 (MQ=255)

     agccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAcc                                                                                    >  1:3486166/1‑93 (MQ=255)

     agccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAcc                                                                                    >  2:3139082/1‑93 (MQ=255)

     agccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAcc                                                                                    >  2:383357/1‑93 (MQ=255)

     agccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAcc                                                                                    <  2:1853594/93‑1 (MQ=255)

      gccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAccc                                                                                   >  1:1464431/1‑93 (MQ=255)

        cagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCAc                                                                                 >  1:3758151/1‑93 (MQ=255)

        cagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCAc                                                                                 <  2:3858973/93‑1 (MQ=255)

        cagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCAc                                                                                 <  1:2367559/93‑1 (MQ=255)

        cagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTCACCCAc                                                                                 >  1:1509933/1‑93 (MQ=255)

         agTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACg                                                                                >  1:3601870/1‑93 (MQ=255)

         agTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACg                                                                                >  1:551558/1‑93 (MQ=255)

         agTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACg                                                                                >  2:1624449/1‑93 (MQ=255)

             gATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCaa                                                                            <  1:3313661/93‑1 (MQ=255)

             gATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCaa                                                                            <  1:1212687/93‑1 (MQ=255)

             gATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCaa                                                                            >  2:1478495/1‑93 (MQ=255)

              aTTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAAc                                                                           <  2:57361/93‑1 (MQ=255)

              aTTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAAc                                                                           >  1:1348506/1‑93 (MQ=255)

              aTTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAAc                                                                           >  1:2239804/1‑93 (MQ=255)

                 gAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACggg                                                                        >  2:2763271/1‑93 (MQ=255)

                  aGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGc                                                                       <  1:2782191/93‑1 (MQ=255)

                  aGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGc                                                                       <  2:694457/93‑1 (MQ=255)

                   gCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGcc                                                                      <  1:4210136/93‑1 (MQ=255)

                   gCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGcc                                                                      <  1:2183594/93‑1 (MQ=255)

                      ttaggcgttggcggTGAAAGTCGTCGCCGATACCGCGCTGGAAATGCTGGCTTCCGACTACGGCATTGAGCTCATCTACCGCAACGGGCCgga                                                                   >  2:3882491/3‑91 (MQ=255)

                      tCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCCGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCa                                                                   <  1:1028169/93‑1 (MQ=255)

                       cAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAg                                                                  <  1:1318782/93‑1 (MQ=255)

                        aggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAgg                                                                 >  2:1338336/1‑93 (MQ=255)

                        aggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAgg                                                                 <  1:4102663/93‑1 (MQ=255)

                        aggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAgg                                                                 <  2:4407418/93‑1 (MQ=255)

                         ggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGt                                                                >  1:3008706/1‑93 (MQ=255)

                           cggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCg                                                              <  1:2340258/93‑1 (MQ=255)

                           cggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCg                                                              <  2:4176133/93‑1 (MQ=255)

                            ggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCgg                                                             >  1:3235812/1‑93 (MQ=255)

                              aggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGc                                                           >  1:1068156/1‑93 (MQ=255)

                               ggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGcg                                                          >  2:3162807/1‑92 (MQ=255)

                               ggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCt                                                          <  1:160980/93‑1 (MQ=255)

                               ggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCt                                                          <  2:4000552/93‑1 (MQ=255)

                                  ggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGa                                                       <  2:2329801/93‑1 (MQ=255)

                                   gTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGAt                                                      >  1:1794531/1‑93 (MQ=255)

                                      aaaGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTa                                                   >  2:2943213/1‑93 (MQ=255)

                                      aaaGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTa                                                   <  2:2472940/93‑1 (MQ=255)

                                       aaGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGTCTGGATTTAc                                                  <  2:3048783/93‑1 (MQ=255)

                                       aaGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTAc                                                  >  2:3584132/1‑93 (MQ=255)

                                       aaGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTAc                                                  >  2:3742176/1‑93 (MQ=255)

                                         gCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGc                                                >  1:393602/1‑93 (MQ=255)

                                         gCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGc                                                >  1:3624628/1‑93 (MQ=255)

                                         gCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGc                                                >  1:40174/1‑93 (MQ=255)

                                         gCCCTCGCCGATACGGCGCTGGAAATGCTGTCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCTCAGGTCGGGCTGGATTTACGc                                                <  2:2078101/93‑1 (MQ=255)

                                           cGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCg                                              <  1:4505835/93‑1 (MQ=255)

                                             tCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTg                                            >  2:92960/1‑93 (MQ=255)

                                             tCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTg                                            >  2:2151085/1‑93 (MQ=255)

                                               gCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCg                                          >  1:3873736/1‑93 (MQ=255)

                                                 cGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGga                                        <  1:427832/93‑1 (MQ=255)

                                                  gATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgag                                       >  2:1901049/1‑93 (MQ=255)

                                                  gATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgag                                       >  1:2062001/1‑93 (MQ=255)

                                                   aTACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgaga                                      >  1:1084855/1‑93 (MQ=255)

                                                   aTACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgaga                                      <  1:3251248/93‑1 (MQ=255)

                                                   aTACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgaga                                      <  1:1621066/93‑1 (MQ=255)

                                                     aCGGCGCTGGAAATGCTGGCGTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGAtt                                    <  2:4253814/93‑1 (MQ=255)

                                                        gcgCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGcc                                 <  2:1955638/91‑1 (MQ=255)

                                                        gcgCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGcc                                 >  1:4298141/3‑93 (MQ=255)

                                                         cgCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGccc                                >  1:1285197/2‑93 (MQ=255)

                                                          gCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCca                               >  2:4263717/1‑93 (MQ=255)

                                                           cTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCcac                              >  1:2617038/1‑93 (MQ=255)

                                                            tGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCcaca                             >  1:3106646/1‑93 (MQ=255)

                                                            tGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCcaca                             <  1:4010256/93‑1 (MQ=255)

                                                             ggAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACaa                            <  1:3407697/93‑1 (MQ=255)

                                                             ggAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACaa                            <  2:3573506/93‑1 (MQ=255)

                                                             ggAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACaa                            <  1:4079324/93‑1 (MQ=255)

                                                               aaaTGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAgc                          >  2:4437912/1‑93 (MQ=255)

                                                                aaTGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAgcg                         <  1:252473/93‑1 (MQ=255)

                                                                aaTGCTGGCTCCCGATTACGACATTGCGCTGACCCACGGCAACGTGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAgcg                         <  1:4352211/93‑1 (MQ=255)

                                                                  tGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGcgcg                       <  2:1714858/93‑1 (MQ=255)

                                                                  tGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCACAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGcgcg                       >  2:4478016/1‑93 (MQ=255)

                                                                     tGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAg                    <  2:1139984/93‑1 (MQ=255)

                                                                     tGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAg                    >  2:459544/1‑93 (MQ=255)

                                                                      ggCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAgg                   >  2:2828653/1‑93 (MQ=255)

                                                                       gCTGCCGATTACGACATTGAGCTGACCCACGTCAACGGGCCGCAGGTCGGGCTGGATTAACGCCGTGCGGAGATTGCCCGCAAGCGCGAAggg                  <  2:614898/93‑1 (MQ=255)

                                                                        cTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGc                 <  1:982707/93‑1 (MQ=255)

                                                                        cTTCCGATTACGACATTGCGCTGACACACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGc                 <  1:73805/93‑1 (MQ=255)

                                                                         ttCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCt                <  2:1083593/93‑1 (MQ=255)

                                                                          tCCCATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTg               >  2:640079/1‑93 (MQ=255)

                                                                            cGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGcc             >  2:415658/1‑93 (MQ=255)

                                                                             gATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGccc            <  1:849385/93‑1 (MQ=255)

                                                                               ttACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGCGATTGCCCACAAGCGCGAAGGGCTGCCCtt          >  2:748034/1‑93 (MQ=255)

                                                                                tACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTa         >  1:2261431/1‑93 (MQ=255)

                                                                                 aCGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTaa        <  1:3350069/93‑1 (MQ=255)

                                                                                 aCGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTaa        <  2:2611727/93‑1 (MQ=255)

                                                                                  cGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAAc       <  1:2925797/93‑1 (MQ=255)

                                                                                   gACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAAcg      <  1:543601/93‑1 (MQ=255)

                                                                                    aCATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAAcgc     >  1:780000/1‑93 (MQ=255)

                                                                                    aCATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAAcgc     >  1:3643224/1‑93 (MQ=255)

                                                                                     cATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAAcgcc    >  1:1935872/1‑93 (MQ=255)

                                                                                       ttGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAAcgccgc  <  1:2002182/93‑1 (MQ=255)

                                                                                       ttGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAAcgccgc  >  2:3508555/1‑93 (MQ=255)

ACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGTGCTGGAAATGCTGGCTTCCGATTACGACATTGTGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAACGCCGC  >  NC_000913/339441‑339620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`